RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 FLNAP21333 2647 aaKnown RBP0.94□□□□□ -2.26
PRPF4-203ENST00000488937 NBEAL2Q6ZNJ1 2754 aa0.94□□□□□ -2.26
PRPF4-203ENST00000488937 NSD1Q96L73 2696 aaPredicted RBP0.93□□□□□ -2.26
PRPF4-203ENST00000488937 TLN2Q9Y4G6 2542 aa0.93□□□□□ -2.26
PRPF4-203ENST00000488937 COX6B1P14854 86 aa0.93□□□□□ -2.26
PRPF4-203ENST00000488937 ALMS1Q8TCU4 4167 aa0.93□□□□□ -2.26
PRPF4-203ENST00000488937 AKAP13Q12802 2813 aa0.93□□□□□ -2.26
PRPF4-203ENST00000488937 ATMQ13315 3056 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 BOD1L1Q8NFC6 3051 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 DDX60Q8IY21 1712 aaKnown RBP0.92□□□□□ -2.26
PRPF4-203ENST00000488937 ADGRG4Q8IZF6 3080 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 DEFB131BA0A096LNP1 70 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 Q9Y3F1 56 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 TENM1Q9UKZ4 2725 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 APCP25054 2843 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 CSPG4Q6UVK1 2322 aa0.92□□□□□ -2.26
PRPF4-203ENST00000488937 UTP20O75691 2785 aaKnown RBP0.91□□□□□ -2.26
PRPF4-203ENST00000488937 ANK2Q01484 3957 aa0.91□□□□□ -2.26
PRPF4-203ENST00000488937 CELSR1Q9NYQ6 3014 aa0.91□□□□□ -2.26
PRPF4-203ENST00000488937 CCL22O00626 93 aa0.91□□□□□ -2.26
PRPF4-203ENST00000488937 MXRA5Q9NR99 2828 aa0.91□□□□□ -2.26
PRPF4-203ENST00000488937 LAMA1P25391 3075 aa0.9□□□□□ -2.26
PRPF4-203ENST00000488937 MGAQ8IWI9 3026 aa0.9□□□□□ -2.27
PRPF4-203ENST00000488937 ETDCA0A1B0GVM5 59 aa0.9□□□□□ -2.27
PRPF4-203ENST00000488937 CRYBG3Q68DQ2 2970 aa0.9□□□□□ -2.27
PRPF4-203ENST00000488937 PRRC2CQ9Y520 2896 aaKnown RBP0.9□□□□□ -2.27
PRPF4-203ENST00000488937 ACANP16112 2415 aa0.89□□□□□ -2.27
PRPF4-203ENST00000488937 CSMD1Q96PZ7 3565 aa0.89□□□□□ -2.27
PRPF4-203ENST00000488937 WNK1Q9H4A3 2382 aa0.89□□□□□ -2.27
PRPF4-203ENST00000488937 SPRR1BP22528 89 aa0.89□□□□□ -2.27
PRPF4-203ENST00000488937 LELP1Q5T871 98 aa0.89□□□□□ -2.27
PRPF4-203ENST00000488937 MGAM2Q2M2H8 2515 aa0.89□□□□□ -2.27
PRPF4-203ENST00000488937 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
PRPF4-203ENST00000488937 CSMD3Q7Z407 3707 aa0.88□□□□□ -2.27
PRPF4-203ENST00000488937 TGP01266 2768 aa0.88□□□□□ -2.27
PRPF4-203ENST00000488937 TACC2O95359 2948 aa0.88□□□□□ -2.27
PRPF4-203ENST00000488937 NDUFA3O95167 84 aa0.88□□□□□ -2.27
PRPF4-203ENST00000488937 CRIP1P50238 77 aa0.88□□□□□ -2.27
PRPF4-203ENST00000488937 NBPF19A0A087WUL8 3843 aa0.88□□□□□ -2.27
PRPF4-203ENST00000488937 FRAS1Q86XX4 4008 aa0.87□□□□□ -2.27
PRPF4-203ENST00000488937 PCLOQ9Y6V0 5065 aa0.87□□□□□ -2.27
PRPF4-203ENST00000488937 TENM3Q9P273 2699 aa0.87□□□□□ -2.27
PRPF4-203ENST00000488937 SPENQ96T58 3664 aaKnown RBP0.87□□□□□ -2.27
PRPF4-203ENST00000488937 CSMD2Q7Z408 3487 aa0.87□□□□□ -2.27
PRPF4-203ENST00000488937 MAP1AP78559 2803 aaPredicted RBP0.86□□□□□ -2.27
PRPF4-203ENST00000488937 K7EMI3 77 aa0.86□□□□□ -2.27
PRPF4-203ENST00000488937 MRPL33O75394 65 aaKnown RBP0.86□□□□□ -2.27
PRPF4-203ENST00000488937 DEFB105AQ8NG35 78 aa0.86□□□□□ -2.27
PRPF4-203ENST00000488937 VWFP04275 2813 aa0.86□□□□□ -2.27
PRPF4-203ENST00000488937 IGIPA6NJ69 53 aa0.85□□□□□ -2.27
PRPF4-203ENST00000488937 H1FX-AS1Q4G0G2 97 aa0.85□□□□□ -2.27
PRPF4-203ENST00000488937 DCHS2Q6V1P9 2916 aa0.85□□□□□ -2.27
PRPF4-203ENST00000488937 KMT2CQ8NEZ4 4911 aaKnown RBP0.84□□□□□ -2.27
PRPF4-203ENST00000488937 H0YAA0 97 aa0.84□□□□□ -2.27
PRPF4-203ENST00000488937 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
PRPF4-203ENST00000488937 APLNQ9ULZ1 77 aa0.84□□□□□ -2.27
PRPF4-203ENST00000488937 VPS13CQ709C8 3753 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 UBR4Q5T4S7 5183 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 SNRPGP15A8MWD9 76 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 FCER1GP30273 86 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 DEFB124Q8NES8 71 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 NMES1Q9C002 83 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 BIRC6Q9NR09 4857 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 TENM2Q9NT68 2774 aa0.83□□□□□ -2.28
PRPF4-203ENST00000488937 RYR1P21817 5038 aa0.82□□□□□ -2.28
PRPF4-203ENST00000488937 M0R1W7 72 aa0.82□□□□□ -2.28
PRPF4-203ENST00000488937 RYR3Q15413 4870 aa0.82□□□□□ -2.28
PRPF4-203ENST00000488937 AKAP9Q99996 3911 aa0.82□□□□□ -2.28
PRPF4-203ENST00000488937 HYDINQ4G0P3 5121 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 BSNQ9UPA5 3926 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 LYNX1G3V0Z9 82 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 NCBP2-AS2Q69YL0 99 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 FXYD6Q9H0Q3 95 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 KNL1Q8NG31 2342 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 CUBNO60494 3623 aa0.81□□□□□ -2.28
PRPF4-203ENST00000488937 ZANQ9Y493 2812 aa0.8□□□□□ -2.28
PRPF4-203ENST00000488937 STAB2Q8WWQ8 2551 aa0.8□□□□□ -2.28
PRPF4-203ENST00000488937 LINC00158P58513 81 aa0.8□□□□□ -2.28
PRPF4-203ENST00000488937 SERF2P84101 59 aa0.8□□□□□ -2.28
PRPF4-203ENST00000488937 WFDC13Q8IUB5 93 aa0.8□□□□□ -2.28
PRPF4-203ENST00000488937 DMBT1Q9UGM3 2413 aaPredicted RBP0.8□□□□□ -2.28
PRPF4-203ENST00000488937 SVEP1Q4LDE5 3571 aa0.8□□□□□ -2.28
PRPF4-203ENST00000488937 EPPK1P58107 5090 aaKnown RBP0.8□□□□□ -2.28
PRPF4-203ENST00000488937 ZNF469Q96JG9 3925 aaPredicted RBP0.8□□□□□ -2.28
PRPF4-203ENST00000488937 COL7A1Q02388 2944 aa0.79□□□□□ -2.28
PRPF4-203ENST00000488937 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
PRPF4-203ENST00000488937 KLK9Q2XQG4 91 aa0.79□□□□□ -2.28
PRPF4-203ENST00000488937 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
PRPF4-203ENST00000488937 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
PRPF4-203ENST00000488937 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
PRPF4-203ENST00000488937 PKDREJQ9NTG1 2253 aa0.78□□□□□ -2.28
PRPF4-203ENST00000488937 HERC2O95714 4834 aa0.78□□□□□ -2.28
PRPF4-203ENST00000488937 SPINK4O60575 86 aa0.77□□□□□ -2.29
PRPF4-203ENST00000488937 CD52P31358 61 aa0.77□□□□□ -2.29
PRPF4-203ENST00000488937 SMR3AQ99954 134 aa0.77□□□□□ -2.29
PRPF4-203ENST00000488937 RYR2Q92736 4967 aa0.77□□□□□ -2.29
PRPF4-203ENST00000488937 PRKDCP78527 4128 aaKnown RBP0.76□□□□□ -2.29
PRPF4-203ENST00000488937 CMC2Q9NRP2 79 aa0.76□□□□□ -2.29
PRPF4-203ENST00000488937 FSIP2Q5CZC0 6907 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms