RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PSMB2P49721 201 aa9.04□□□□□ -0.96
HDAC6-231ENST00000488905 A0A1B0GVX0 72 aa9.03□□□□□ -0.96
HDAC6-231ENST00000488905 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
HDAC6-231ENST00000488905 K7ERJ3 54 aa9.02□□□□□ -0.97
HDAC6-231ENST00000488905 MTURNQ8N3F0 131 aa9.02□□□□□ -0.97
HDAC6-231ENST00000488905 COX6CP09669 75 aa9□□□□□ -0.97
HDAC6-231ENST00000488905 UBE2V1Q13404 147 aa9□□□□□ -0.97
HDAC6-231ENST00000488905 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
HDAC6-231ENST00000488905 VPS25Q9BRG1 176 aa8.99□□□□□ -0.97
HDAC6-231ENST00000488905 HSD52Q0P140 79 aa8.98□□□□□ -0.97
HDAC6-231ENST00000488905 MACF1Q9UPN3 7388 aaKnown RBP8.97□□□□□ -0.97
HDAC6-231ENST00000488905 SPINK7P58062 85 aa8.94□□□□□ -0.98
HDAC6-231ENST00000488905 RBM3P98179 157 aaKnown RBP8.93□□□□□ -0.98
HDAC6-231ENST00000488905 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
HDAC6-231ENST00000488905 J3KT08 172 aa8.92□□□□□ -0.98
HDAC6-231ENST00000488905 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
HDAC6-231ENST00000488905 SYNE2Q8WXH0 6885 aaKnown RBP8.89□□□□□ -0.99
HDAC6-231ENST00000488905 C21orf62-AS1Q17RA5 79 aa8.88□□□□□ -0.99
HDAC6-231ENST00000488905 KRTAP19-6Q3LI70 58 aa8.88□□□□□ -0.99
HDAC6-231ENST00000488905 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-231ENST00000488905 LINC00846Q9NV44 126 aa8.88□□□□□ -0.99
HDAC6-231ENST00000488905 A8MWP4 228 aa8.87□□□□□ -0.99
HDAC6-231ENST00000488905 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
HDAC6-231ENST00000488905 C9JAW5 83 aa8.85□□□□□ -0.99
HDAC6-231ENST00000488905 Q6ZQT0 140 aa8.85□□□□□ -0.99
HDAC6-231ENST00000488905 NDUFB1O75438 58 aa8.84□□□□□ -0.99
HDAC6-231ENST00000488905 SCGB1C2P0DMR2 95 aa8.84□□□□□ -0.99
HDAC6-231ENST00000488905 UQCR10Q9UDW1 63 aa8.84□□□□□ -0.99
HDAC6-231ENST00000488905 C8orf17Q9NRJ1 99 aa8.82□□□□□ -1
HDAC6-231ENST00000488905 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
HDAC6-231ENST00000488905 LYRM7Q5U5X0 104 aa8.8□□□□□ -1
HDAC6-231ENST00000488905 TMA7Q9Y2S6 64 aaKnown RBP8.8□□□□□ -1
HDAC6-231ENST00000488905 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
HDAC6-231ENST00000488905 Q6ZVQ6 151 aa8.75□□□□□ -1.01
HDAC6-231ENST00000488905 A0A1B0GW54 56 aa8.73□□□□□ -1.01
HDAC6-231ENST00000488905 LOC110117498A0A087WWA1 95 aa8.72□□□□□ -1.01
HDAC6-231ENST00000488905 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
HDAC6-231ENST00000488905 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
HDAC6-231ENST00000488905 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
HDAC6-231ENST00000488905 PDE6GP18545 87 aa8.67□□□□□ -1.02
HDAC6-231ENST00000488905 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
HDAC6-231ENST00000488905 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
HDAC6-231ENST00000488905 TMEM254Q8TBM7 123 aa8.65□□□□□ -1.02
HDAC6-231ENST00000488905 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.02
HDAC6-231ENST00000488905 C14orf132Q9NPU4 83 aa8.65□□□□□ -1.02
HDAC6-231ENST00000488905 NAA38Q9BRA0 125 aaKnown RBP8.63□□□□□ -1.03
HDAC6-231ENST00000488905 KRTAP6-3Q3LI67 103 aa8.62□□□□□ -1.03
HDAC6-231ENST00000488905 M0R143 59 aa8.61□□□□□ -1.03
HDAC6-231ENST00000488905 NREPQ16612 68 aa8.61□□□□□ -1.03
HDAC6-231ENST00000488905 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
HDAC6-231ENST00000488905 NDUFS5O43920 106 aa8.58□□□□□ -1.04
HDAC6-231ENST00000488905 K7EQZ3 153 aa8.57□□□□□ -1.04
HDAC6-231ENST00000488905 SMIM6P0DI80 62 aa8.56□□□□□ -1.04
HDAC6-231ENST00000488905 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
HDAC6-231ENST00000488905 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
HDAC6-231ENST00000488905 C7orf65Q6ZTY9 151 aa8.54□□□□□ -1.04
HDAC6-231ENST00000488905 Q5W150 140 aa8.48□□□□□ -1.05
HDAC6-231ENST00000488905 TSTD3H0UI37 97 aa8.46□□□□□ -1.06
HDAC6-231ENST00000488905 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
HDAC6-231ENST00000488905 BPY2O14599 106 aa8.44□□□□□ -1.06
HDAC6-231ENST00000488905 SMCPP49901 116 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-231ENST00000488905 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
HDAC6-231ENST00000488905 NEBP20929 6669 aa8.39□□□□□ -1.07
HDAC6-231ENST00000488905 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
HDAC6-231ENST00000488905 H3BT86 120 aa8.39□□□□□ -1.07
HDAC6-231ENST00000488905 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
HDAC6-231ENST00000488905 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
HDAC6-231ENST00000488905 FAM236AA0A1B0GUQ0 79 aa8.38□□□□□ -1.07
HDAC6-231ENST00000488905 FAM236BA0A1B0GV22 79 aa8.38□□□□□ -1.07
HDAC6-231ENST00000488905 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
HDAC6-231ENST00000488905 Q8N9L7 120 aa8.38□□□□□ -1.07
HDAC6-231ENST00000488905 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
HDAC6-231ENST00000488905 BATFQ16520 125 aa8.37□□□□□ -1.07
HDAC6-231ENST00000488905 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
HDAC6-231ENST00000488905 C9orf118A6NHY6 69 aa8.36□□□□□ -1.07
HDAC6-231ENST00000488905 A6NN06 94 aa8.36□□□□□ -1.07
HDAC6-231ENST00000488905 MT1BP07438 61 aa8.34□□□□□ -1.07
HDAC6-231ENST00000488905 CXCL6P80162 114 aa8.34□□□□□ -1.07
HDAC6-231ENST00000488905 Q5VV11 94 aa8.32□□□□□ -1.08
HDAC6-231ENST00000488905 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
HDAC6-231ENST00000488905 S4R3F8 94 aa8.31□□□□□ -1.08
HDAC6-231ENST00000488905 A0A1W2PPM0 123 aa8.3□□□□□ -1.08
HDAC6-231ENST00000488905 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
HDAC6-231ENST00000488905 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
HDAC6-231ENST00000488905 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
HDAC6-231ENST00000488905 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
HDAC6-231ENST00000488905 LCA10Q71F78 164 aa8.24□□□□□ -1.09
HDAC6-231ENST00000488905 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
HDAC6-231ENST00000488905 KRTAP10-5P60370 271 aa8.21□□□□□ -1.1
HDAC6-231ENST00000488905 MDN1Q9NU22 5596 aa8.19□□□□□ -1.1
HDAC6-231ENST00000488905 KLKP1Q107X0 134 aa8.17□□□□□ -1.1
HDAC6-231ENST00000488905 SPCS1Q9Y6A9 102 aa8.17□□□□□ -1.1
HDAC6-231ENST00000488905 UBL5Q9BZL1 73 aa8.16□□□□□ -1.1
HDAC6-231ENST00000488905 KMT2DO14686 5537 aa8.16□□□□□ -1.1
HDAC6-231ENST00000488905 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
HDAC6-231ENST00000488905 KRTAP20-1Q3LI63 56 aa8.13□□□□□ -1.11
HDAC6-231ENST00000488905 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
HDAC6-231ENST00000488905 TP53AIP1Q9HCN2 124 aa8.08□□□□□ -1.12
HDAC6-231ENST00000488905 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
HDAC6-231ENST00000488905 K7EP34 96 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms