RNA–Protein interactions for RNA: ENST00000488471.1

KIF3A-207, Transcript of kinesin family member 3A, humanhuman

TSL 2

Gene KIF3A, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-207ENST00000488471 PKD1L1Q8TDX9 2849 aa0.54□□□□□ -2.32
KIF3A-207ENST00000488471 RPL39P62891 51 aaKnown RBP0.54□□□□□ -2.32
KIF3A-207ENST00000488471 HIVEP3Q5T1R4 2406 aa0.53□□□□□ -2.32
KIF3A-207ENST00000488471 NBASA2RRP1 2371 aa0.53□□□□□ -2.33
KIF3A-207ENST00000488471 ACANP16112 2415 aa0.52□□□□□ -2.33
KIF3A-207ENST00000488471 MACF1Q9UPN3 7388 aaKnown RBP0.52□□□□□ -2.33
KIF3A-207ENST00000488471 APC2O95996 2303 aa0.52□□□□□ -2.33
KIF3A-207ENST00000488471 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
KIF3A-207ENST00000488471 LRP1Q07954 4544 aaKnown RBP0.51□□□□□ -2.33
KIF3A-207ENST00000488471 TNP1P09430 55 aa0.51□□□□□ -2.33
KIF3A-207ENST00000488471 SPRR2BP35325 72 aa0.51□□□□□ -2.33
KIF3A-207ENST00000488471 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
KIF3A-207ENST00000488471 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
KIF3A-207ENST00000488471 UBR5O95071 2799 aaPredicted RBP0.49□□□□□ -2.33
KIF3A-207ENST00000488471 RPL39LQ96EH5 51 aaKnown RBP0.49□□□□□ -2.33
KIF3A-207ENST00000488471 NAV2Q8IVL1 2488 aa0.48□□□□□ -2.33
KIF3A-207ENST00000488471 LPAP08519 4548 aa0.48□□□□□ -2.33
KIF3A-207ENST00000488471 USP24Q9UPU5 2620 aa0.47□□□□□ -2.33
KIF3A-207ENST00000488471 LYSTQ99698 3801 aa0.47□□□□□ -2.33
KIF3A-207ENST00000488471 MYCBP2O75592 4640 aa0.47□□□□□ -2.33
KIF3A-207ENST00000488471 NCOR2Q9Y618 2525 aa0.46□□□□□ -2.34
KIF3A-207ENST00000488471 SRRM2Q9UQ35 2752 aaKnown RBP0.46□□□□□ -2.34
KIF3A-207ENST00000488471 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
KIF3A-207ENST00000488471 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
KIF3A-207ENST00000488471 DMBT1Q9UGM3 2413 aaPredicted RBP0.45□□□□□ -2.34
KIF3A-207ENST00000488471 NF1P21359 2839 aa0.45□□□□□ -2.34
KIF3A-207ENST00000488471 KMT2AQ03164 3969 aa0.45□□□□□ -2.34
KIF3A-207ENST00000488471 A0A0C4DFX4 3053 aa0.45□□□□□ -2.34
KIF3A-207ENST00000488471 TOMM7Q9P0U1 55 aa0.44□□□□□ -2.34
KIF3A-207ENST00000488471 HRNRQ86YZ3 2850 aaPredicted RBP0.44□□□□□ -2.34
KIF3A-207ENST00000488471 GCC2Q8IWJ2 1684 aa0.43□□□□□ -2.34
KIF3A-207ENST00000488471 LEAP2Q969E1 77 aa0.43□□□□□ -2.34
KIF3A-207ENST00000488471 MTORP42345 2549 aa0.43□□□□□ -2.34
KIF3A-207ENST00000488471 ACACAQ13085 2346 aa0.43□□□□□ -2.34
KIF3A-207ENST00000488471 STAB1Q9NY15 2570 aa0.42□□□□□ -2.34
KIF3A-207ENST00000488471 SPRR2AP35326 72 aa0.42□□□□□ -2.34
KIF3A-207ENST00000488471 ARHGAP5-AS1Q96IT6 56 aa0.42□□□□□ -2.34
KIF3A-207ENST00000488471 FLNBO75369 2602 aaKnown RBP0.42□□□□□ -2.34
KIF3A-207ENST00000488471 FLNCQ14315 2725 aa0.42□□□□□ -2.34
KIF3A-207ENST00000488471 SONP18583 2426 aaKnown RBP0.42□□□□□ -2.34
KIF3A-207ENST00000488471 PKD1P98161 4303 aa0.41□□□□□ -2.34
KIF3A-207ENST00000488471 MT1AP04731 61 aa0.41□□□□□ -2.34
KIF3A-207ENST00000488471 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
KIF3A-207ENST00000488471 NSD1Q96L73 2696 aaPredicted RBP0.4□□□□□ -2.35
KIF3A-207ENST00000488471 KRTAP6-2Q3LI66 62 aa0.4□□□□□ -2.35
KIF3A-207ENST00000488471 VPS13BQ7Z7G8 4022 aa0.4□□□□□ -2.35
KIF3A-207ENST00000488471 SETD2Q9BYW2 2564 aaPredicted RBP0.4□□□□□ -2.35
KIF3A-207ENST00000488471 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
KIF3A-207ENST00000488471 SACSQ9NZJ4 4579 aa0.39□□□□□ -2.35
KIF3A-207ENST00000488471 SPTBN4Q9H254 2564 aa0.39□□□□□ -2.35
KIF3A-207ENST00000488471 SPART-AS1P0CW21 52 aa0.39□□□□□ -2.35
KIF3A-207ENST00000488471 RIF1Q5UIP0 2472 aaKnown RBP0.39□□□□□ -2.35
KIF3A-207ENST00000488471 COL7A1Q02388 2944 aa0.38□□□□□ -2.35
KIF3A-207ENST00000488471 GCN1Q92616 2671 aaKnown RBP0.38□□□□□ -2.35
KIF3A-207ENST00000488471 CUBNO60494 3623 aa0.37□□□□□ -2.35
KIF3A-207ENST00000488471 PDZD2O15018 2839 aa0.37□□□□□ -2.35
KIF3A-207ENST00000488471 KRTAP8-1Q8IUC2 63 aa0.37□□□□□ -2.35
KIF3A-207ENST00000488471 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
KIF3A-207ENST00000488471 COL6A5A8TX70 2615 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 HSPG2P98160 4391 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 ANK3Q12955 4377 aaKnown RBP0.36□□□□□ -2.35
KIF3A-207ENST00000488471 DMXL1Q9Y485 3027 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 FAM186AA6NE01 2351 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 ANKHD1Q8IWZ3 2542 aaKnown RBP0.36□□□□□ -2.35
KIF3A-207ENST00000488471 EPG5Q9HCE0 2579 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 ZZEF1O43149 2961 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 DNAH3Q8TD57 4116 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
KIF3A-207ENST00000488471 UTP20O75691 2785 aaKnown RBP0.35□□□□□ -2.35
KIF3A-207ENST00000488471 DNAH9Q9NYC9 4486 aa0.35□□□□□ -2.35
KIF3A-207ENST00000488471 DCHS2Q6V1P9 2916 aa0.35□□□□□ -2.35
KIF3A-207ENST00000488471 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
KIF3A-207ENST00000488471 DNAH11Q96DT5 4516 aa0.35□□□□□ -2.35
KIF3A-207ENST00000488471 SPG11Q96JI7 2443 aa0.35□□□□□ -2.35
KIF3A-207ENST00000488471 TACC2O95359 2948 aa0.34□□□□□ -2.36
KIF3A-207ENST00000488471 LINC01590Q5TEZ4 76 aa0.34□□□□□ -2.36
KIF3A-207ENST00000488471 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
KIF3A-207ENST00000488471 LRRK2Q5S007 2527 aa0.34□□□□□ -2.36
KIF3A-207ENST00000488471 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.36
KIF3A-207ENST00000488471 DNAH2Q9P225 4427 aa0.33□□□□□ -2.36
KIF3A-207ENST00000488471 SPRR2EP22531 72 aa0.33□□□□□ -2.36
KIF3A-207ENST00000488471 FLGP20930 4061 aaPredicted RBP0.33□□□□□ -2.36
KIF3A-207ENST00000488471 DSTQ03001 7570 aaKnown RBP0.33□□□□□ -2.36
KIF3A-207ENST00000488471 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
KIF3A-207ENST00000488471 ANKRD11Q6UB99 2663 aaPredicted RBP0.32□□□□□ -2.36
KIF3A-207ENST00000488471 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
KIF3A-207ENST00000488471 PKHD1L1Q86WI1 4243 aa0.32□□□□□ -2.36
KIF3A-207ENST00000488471 MAST4O15021 2626 aa0.32□□□□□ -2.36
KIF3A-207ENST00000488471 COL6A3P12111 3177 aa0.31□□□□□ -2.36
KIF3A-207ENST00000488471 FASNP49327 2511 aaKnown RBP0.31□□□□□ -2.36
KIF3A-207ENST00000488471 DYNC2H1Q8NCM8 4307 aaKnown RBP0.31□□□□□ -2.36
KIF3A-207ENST00000488471 FAT4Q6V0I7 4981 aa0.31□□□□□ -2.36
KIF3A-207ENST00000488471 PKHD1P08F94 4074 aa0.31□□□□□ -2.36
KIF3A-207ENST00000488471 FLNAP21333 2647 aaKnown RBP0.3□□□□□ -2.36
KIF3A-207ENST00000488471 SPRR2FQ96RM1 72 aa0.3□□□□□ -2.36
KIF3A-207ENST00000488471 ACACBO00763 2458 aa0.3□□□□□ -2.36
KIF3A-207ENST00000488471 COL12A1Q99715 3063 aa0.3□□□□□ -2.36
KIF3A-207ENST00000488471 NEBP20929 6669 aa0.3□□□□□ -2.36
KIF3A-207ENST00000488471 RANBP2P49792 3224 aaKnown RBP0.3□□□□□ -2.36
KIF3A-207ENST00000488471 VPS13DQ5THJ4 4388 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms