RNA–Protein interactions for RNA: ENST00000487540.6

CSF3R-212, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 1,931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-212ENST00000487540 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
CSF3R-212ENST00000487540 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
CSF3R-212ENST00000487540 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
CSF3R-212ENST00000487540 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
CSF3R-212ENST00000487540 LOC101927531A0A1B0GV80 90 aa9.27□□□□□ -0.93
CSF3R-212ENST00000487540 LY6G6CO95867 125 aa9.27□□□□□ -0.93
CSF3R-212ENST00000487540 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
CSF3R-212ENST00000487540 C1orf134Q5TEV5 83 aa9.27□□□□□ -0.93
CSF3R-212ENST00000487540 NDUFS5O43920 106 aa9.25□□□□□ -0.93
CSF3R-212ENST00000487540 DNAH2Q9P225 4427 aa9.25□□□□□ -0.93
CSF3R-212ENST00000487540 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
CSF3R-212ENST00000487540 Q75L30 129 aa9.21□□□□□ -0.93
CSF3R-212ENST00000487540 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
CSF3R-212ENST00000487540 Q5W150 140 aa9.2□□□□□ -0.94
CSF3R-212ENST00000487540 LINC01558Q9Y6Z2 57 aa9.19□□□□□ -0.94
CSF3R-212ENST00000487540 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
CSF3R-212ENST00000487540 HRES1P13985 223 aa9.19□□□□□ -0.94
CSF3R-212ENST00000487540 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
CSF3R-212ENST00000487540 CIRBP-AS1Q8TBR5 109 aa9.17□□□□□ -0.94
CSF3R-212ENST00000487540 KMT2AQ03164 3969 aa9.16□□□□□ -0.94
CSF3R-212ENST00000487540 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
CSF3R-212ENST00000487540 DNAH6Q9C0G6 4158 aa9.15□□□□□ -0.94
CSF3R-212ENST00000487540 A8MU10 97 aa9.15□□□□□ -0.95
CSF3R-212ENST00000487540 FRAS1Q86XX4 4008 aa9.13□□□□□ -0.95
CSF3R-212ENST00000487540 TGP01266 2768 aa9.13□□□□□ -0.95
CSF3R-212ENST00000487540 ALMS1Q8TCU4 4167 aa9.11□□□□□ -0.95
CSF3R-212ENST00000487540 LCA10Q71F78 164 aa9.1□□□□□ -0.95
CSF3R-212ENST00000487540 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
CSF3R-212ENST00000487540 SPAG11AQ6PDA7 123 aa9.09□□□□□ -0.95
CSF3R-212ENST00000487540 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
CSF3R-212ENST00000487540 Q6ZSA8 131 aa9.08□□□□□ -0.96
CSF3R-212ENST00000487540 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
CSF3R-212ENST00000487540 LINC00313P59037 77 aa9.07□□□□□ -0.96
CSF3R-212ENST00000487540 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
CSF3R-212ENST00000487540 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
CSF3R-212ENST00000487540 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
CSF3R-212ENST00000487540 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
CSF3R-212ENST00000487540 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
CSF3R-212ENST00000487540 A6NED7 52 aa9.03□□□□□ -0.96
CSF3R-212ENST00000487540 ACYP2P14621 99 aa9.03□□□□□ -0.96
CSF3R-212ENST00000487540 KRTAP16-1A8MUX0 517 aa9.02□□□□□ -0.97
CSF3R-212ENST00000487540 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
CSF3R-212ENST00000487540 IGKV2-30P06310 120 aa9□□□□□ -0.97
CSF3R-212ENST00000487540 KRTAP10-1P60331 282 aa9□□□□□ -0.97
CSF3R-212ENST00000487540 PRR26Q8N8Z3 221 aa9□□□□□ -0.97
CSF3R-212ENST00000487540 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
CSF3R-212ENST00000487540 SPINK7P58062 85 aa8.95□□□□□ -0.98
CSF3R-212ENST00000487540 A6NN06 94 aa8.93□□□□□ -0.98
CSF3R-212ENST00000487540 PKD1P98161 4303 aa8.92□□□□□ -0.98
CSF3R-212ENST00000487540 LRP1BQ9NZR2 4599 aa8.92□□□□□ -0.98
CSF3R-212ENST00000487540 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
CSF3R-212ENST00000487540 HYDINQ4G0P3 5121 aa8.87□□□□□ -0.99
CSF3R-212ENST00000487540 RETNLBQ9BQ08 111 aa8.87□□□□□ -0.99
CSF3R-212ENST00000487540 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
CSF3R-212ENST00000487540 KTN1-AS1Q86SY8 53 aa8.86□□□□□ -0.99
CSF3R-212ENST00000487540 SEC61GP60059 68 aa8.85□□□□□ -0.99
CSF3R-212ENST00000487540 SPINK1P00995 79 aa8.84□□□□□ -1
CSF3R-212ENST00000487540 SACSQ9NZJ4 4579 aa8.82□□□□□ -1
CSF3R-212ENST00000487540 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
CSF3R-212ENST00000487540 C4orf48Q5BLP8 95 aa8.8□□□□□ -1
CSF3R-212ENST00000487540 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
CSF3R-212ENST00000487540 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
CSF3R-212ENST00000487540 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
CSF3R-212ENST00000487540 A0A1B0GU69 56 aa8.76□□□□□ -1.01
CSF3R-212ENST00000487540 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
CSF3R-212ENST00000487540 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
CSF3R-212ENST00000487540 C7orf65Q6ZTY9 151 aa8.72□□□□□ -1.01
CSF3R-212ENST00000487540 A0A1B0GVY2 172 aa8.71□□□□□ -1.02
CSF3R-212ENST00000487540 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
CSF3R-212ENST00000487540 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
CSF3R-212ENST00000487540 UQCR11O14957 56 aa8.63□□□□□ -1.03
CSF3R-212ENST00000487540 RYR2Q92736 4967 aa8.61□□□□□ -1.03
CSF3R-212ENST00000487540 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
CSF3R-212ENST00000487540 A8MUU9 505 aa8.6□□□□□ -1.03
CSF3R-212ENST00000487540 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
CSF3R-212ENST00000487540 C20orf166-AS1Q96NR2 134 aa8.6□□□□□ -1.03
CSF3R-212ENST00000487540 PKHD1P08F94 4074 aa8.58□□□□□ -1.04
CSF3R-212ENST00000487540 KRTAP10-4P60372 401 aaPredicted RBP8.57□□□□□ -1.04
CSF3R-212ENST00000487540 Q8N1X5 172 aa8.56□□□□□ -1.04
CSF3R-212ENST00000487540 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
CSF3R-212ENST00000487540 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
CSF3R-212ENST00000487540 KMT2CQ8NEZ4 4911 aaKnown RBP8.5□□□□□ -1.05
CSF3R-212ENST00000487540 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
CSF3R-212ENST00000487540 APOBP04114 4563 aaKnown RBP8.48□□□□□ -1.05
CSF3R-212ENST00000487540 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
CSF3R-212ENST00000487540 PRAC1Q96KF2 57 aa8.41□□□□□ -1.06
CSF3R-212ENST00000487540 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
CSF3R-212ENST00000487540 FAT1Q14517 4588 aa8.39□□□□□ -1.07
CSF3R-212ENST00000487540 H0YAA0 97 aa8.35□□□□□ -1.07
CSF3R-212ENST00000487540 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
CSF3R-212ENST00000487540 COX6B2Q6YFQ2 88 aa8.33□□□□□ -1.08
CSF3R-212ENST00000487540 A0A1B0GU33 70 aa8.29□□□□□ -1.08
CSF3R-212ENST00000487540 RYR3Q15413 4870 aa8.29□□□□□ -1.08
CSF3R-212ENST00000487540 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
CSF3R-212ENST00000487540 Q5VSD8 79 aa8.28□□□□□ -1.08
CSF3R-212ENST00000487540 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
CSF3R-212ENST00000487540 HSPG2P98160 4391 aa8.21□□□□□ -1.09
CSF3R-212ENST00000487540 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
CSF3R-212ENST00000487540 LINC01554Q52M75 96 aa8.2□□□□□ -1.1
CSF3R-212ENST00000487540 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms