RNA–Protein interactions for RNA: ENST00000487515.1

CHM-204, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 5

Gene CHM, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-204ENST00000487515 HSPG2P98160 4391 aa0.37□□□□□ -2.35
CHM-204ENST00000487515 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
CHM-204ENST00000487515 ABCA5Q8WWZ7 1642 aa0.36□□□□□ -2.35
CHM-204ENST00000487515 IGLV5-48A0A075B6I7 105 aa0.35□□□□□ -2.35
CHM-204ENST00000487515 KAAG1Q9UBP8 84 aa0.35□□□□□ -2.35
CHM-204ENST00000487515 SPTBN4Q9H254 2564 aa0.34□□□□□ -2.35
CHM-204ENST00000487515 ZZEF1O43149 2961 aa0.34□□□□□ -2.36
CHM-204ENST00000487515 COL6A3P12111 3177 aa0.33□□□□□ -2.36
CHM-204ENST00000487515 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
CHM-204ENST00000487515 TENM2Q9NT68 2774 aa0.33□□□□□ -2.36
CHM-204ENST00000487515 WFDC10BQ8IUB3 73 aa0.32□□□□□ -2.36
CHM-204ENST00000487515 SPG11Q96JI7 2443 aa0.32□□□□□ -2.36
CHM-204ENST00000487515 LINC01546A6NGU7 62 aa0.31□□□□□ -2.36
CHM-204ENST00000487515 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
CHM-204ENST00000487515 MTORP42345 2549 aa0.31□□□□□ -2.36
CHM-204ENST00000487515 NRXN3Q9Y4C0 1643 aa0.3□□□□□ -2.36
CHM-204ENST00000487515 A0A1B0GUL6 1792 aa0.29□□□□□ -2.36
CHM-204ENST00000487515 LMO7Q8WWI1 1683 aa0.28□□□□□ -2.36
CHM-204ENST00000487515 SRRM2Q9UQ35 2752 aaKnown RBP0.28□□□□□ -2.36
CHM-204ENST00000487515 SPRR2AP35326 72 aa0.28□□□□□ -2.36
CHM-204ENST00000487515 SMIM2Q9BVW6 85 aa0.28□□□□□ -2.36
CHM-204ENST00000487515 DMXL1Q9Y485 3027 aa0.28□□□□□ -2.36
CHM-204ENST00000487515 SETD2Q9BYW2 2564 aaPredicted RBP0.28□□□□□ -2.37
CHM-204ENST00000487515 GCN1Q92616 2671 aaKnown RBP0.28□□□□□ -2.37
CHM-204ENST00000487515 ZANQ9Y493 2812 aa0.28□□□□□ -2.37
CHM-204ENST00000487515 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
CHM-204ENST00000487515 TFF3Q07654 80 aa0.27□□□□□ -2.37
CHM-204ENST00000487515 PKD1P98161 4303 aa0.27□□□□□ -2.37
CHM-204ENST00000487515 MMP24-AS1A0A0U1RRL7 71 aa0.26□□□□□ -2.37
CHM-204ENST00000487515 VPS13BQ7Z7G8 4022 aa0.26□□□□□ -2.37
CHM-204ENST00000487515 LRRK2Q5S007 2527 aa0.26□□□□□ -2.37
CHM-204ENST00000487515 MAP1AP78559 2803 aaPredicted RBP0.26□□□□□ -2.37
CHM-204ENST00000487515 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
CHM-204ENST00000487515 KMT2DO14686 5537 aa0.25□□□□□ -2.37
CHM-204ENST00000487515 EPG5Q9HCE0 2579 aa0.25□□□□□ -2.37
CHM-204ENST00000487515 KIF21BO75037 1637 aa0.24□□□□□ -2.37
CHM-204ENST00000487515 TOMM5Q8N4H5 51 aa0.24□□□□□ -2.37
CHM-204ENST00000487515 UTP20O75691 2785 aaKnown RBP0.24□□□□□ -2.37
CHM-204ENST00000487515 LRP2P98164 4655 aa0.24□□□□□ -2.37
CHM-204ENST00000487515 FLGP20930 4061 aaPredicted RBP0.23□□□□□ -2.37
CHM-204ENST00000487515 PDZD2O15018 2839 aa0.23□□□□□ -2.37
CHM-204ENST00000487515 M0QY20 66 aa0.23□□□□□ -2.37
CHM-204ENST00000487515 NBEAL1Q6ZS30 2694 aa0.23□□□□□ -2.37
CHM-204ENST00000487515 STAB2Q8WWQ8 2551 aa0.23□□□□□ -2.37
CHM-204ENST00000487515 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
CHM-204ENST00000487515 CUBNO60494 3623 aa0.23□□□□□ -2.37
CHM-204ENST00000487515 ANKRD11Q6UB99 2663 aaPredicted RBP0.22□□□□□ -2.37
CHM-204ENST00000487515 PKHD1P08F94 4074 aa0.22□□□□□ -2.37
CHM-204ENST00000487515 LRP1BQ9NZR2 4599 aa0.22□□□□□ -2.37
CHM-204ENST00000487515 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
CHM-204ENST00000487515 FSIP2Q5CZC0 6907 aa0.21□□□□□ -2.38
CHM-204ENST00000487515 DEFB110Q30KQ9 67 aa0.21□□□□□ -2.38
CHM-204ENST00000487515 ACACAQ13085 2346 aa0.21□□□□□ -2.38
CHM-204ENST00000487515 HTTP42858 3142 aa0.21□□□□□ -2.38
CHM-204ENST00000487515 AKAP9Q99996 3911 aa0.2□□□□□ -2.38
CHM-204ENST00000487515 STAB1Q9NY15 2570 aa0.2□□□□□ -2.38
CHM-204ENST00000487515 DEFB131AP59861 70 aa0.2□□□□□ -2.38
CHM-204ENST00000487515 FASNP49327 2511 aaKnown RBP0.2□□□□□ -2.38
CHM-204ENST00000487515 ANKHD1Q8IWZ3 2542 aaKnown RBP0.2□□□□□ -2.38
CHM-204ENST00000487515 DDX60Q8IY21 1712 aaKnown RBP0.19□□□□□ -2.38
CHM-204ENST00000487515 TACC2O95359 2948 aa0.19□□□□□ -2.38
CHM-204ENST00000487515 A8MTW9 85 aa0.19□□□□□ -2.38
CHM-204ENST00000487515 TNP1P09430 55 aa0.19□□□□□ -2.38
CHM-204ENST00000487515 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
CHM-204ENST00000487515 TGP01266 2768 aa0.18□□□□□ -2.38
CHM-204ENST00000487515 NBEAQ8NFP9 2946 aa0.18□□□□□ -2.38
CHM-204ENST00000487515 FAM186AA6NE01 2351 aa0.18□□□□□ -2.38
CHM-204ENST00000487515 KALRNO60229 2985 aa0.18□□□□□ -2.38
CHM-204ENST00000487515 A0A0C4DFX4 3053 aa0.17□□□□□ -2.38
CHM-204ENST00000487515 IQGAP1P46940 1657 aa0.17□□□□□ -2.38
CHM-204ENST00000487515 MACF1Q9UPN3 7388 aaKnown RBP0.17□□□□□ -2.38
CHM-204ENST00000487515 HIVEP1P15822 2718 aa0.16□□□□□ -2.38
CHM-204ENST00000487515 FAM208AQ9UK61 1670 aaKnown RBP0.16□□□□□ -2.38
CHM-204ENST00000487515 RIF1Q5UIP0 2472 aaKnown RBP0.16□□□□□ -2.38
CHM-204ENST00000487515 DNAH9Q9NYC9 4486 aa0.15□□□□□ -2.38
CHM-204ENST00000487515 M0QZ58 72 aa0.15□□□□□ -2.39
CHM-204ENST00000487515 MT1AP04731 61 aa0.15□□□□□ -2.39
CHM-204ENST00000487515 SPRR2EP22531 72 aa0.15□□□□□ -2.39
CHM-204ENST00000487515 DNAH3Q8TD57 4116 aa0.15□□□□□ -2.39
CHM-204ENST00000487515 IQGAP2Q13576 1575 aa0.15□□□□□ -2.39
CHM-204ENST00000487515 NBEAL2Q6ZNJ1 2754 aa0.12□□□□□ -2.39
CHM-204ENST00000487515 SACSQ9NZJ4 4579 aa0.12□□□□□ -2.39
CHM-204ENST00000487515 NDUFA1O15239 70 aa0.11□□□□□ -2.39
CHM-204ENST00000487515 TRPM2O94759 1503 aa0.11□□□□□ -2.39
CHM-204ENST00000487515 TEP1Q99973 2627 aaKnown RBP0.1□□□□□ -2.39
CHM-204ENST00000487515 MXRA5Q9NR99 2828 aa0.09□□□□□ -2.39
CHM-204ENST00000487515 NFAT5O94916 1531 aa0.08□□□□□ -2.4
CHM-204ENST00000487515 ANK3Q12955 4377 aaKnown RBP0.08□□□□□ -2.4
CHM-204ENST00000487515 PKHD1L1Q86WI1 4243 aa0.08□□□□□ -2.4
CHM-204ENST00000487515 MYO18BQ8IUG5 2567 aa0.08□□□□□ -2.4
CHM-204ENST00000487515 ACACBO00763 2458 aa0.08□□□□□ -2.4
CHM-204ENST00000487515 CCDC168Q8NDH2 2452 aa0.07□□□□□ -2.4
CHM-204ENST00000487515 NBPF19A0A087WUL8 3843 aa0.07□□□□□ -2.4
CHM-204ENST00000487515 SPRR2FQ96RM1 72 aa0.06□□□□□ -2.4
CHM-204ENST00000487515 RANBP2P49792 3224 aaKnown RBP0.06□□□□□ -2.4
CHM-204ENST00000487515 FAT3Q8TDW7 4589 aa0.05□□□□□ -2.4
CHM-204ENST00000487515 COL12A1Q99715 3063 aa0.05□□□□□ -2.4
CHM-204ENST00000487515 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
CHM-204ENST00000487515 MGAM2Q2M2H8 2515 aa0.04□□□□□ -2.4
CHM-204ENST00000487515 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms