RNA–Protein interactions for RNA: ENST00000487515.1

CHM-204, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 5

Gene CHM, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-204ENST00000487515 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
CHM-204ENST00000487515 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
CHM-204ENST00000487515 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
CHM-204ENST00000487515 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
CHM-204ENST00000487515 FOXD1Q16676 465 aa16.05■□□□□ 0.16
CHM-204ENST00000487515 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
CHM-204ENST00000487515 MSH5O43196 834 aa15.22■□□□□ 0.03
CHM-204ENST00000487515 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
CHM-204ENST00000487515 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
CHM-204ENST00000487515 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
CHM-204ENST00000487515 ADRA2BP18089 450 aa14.6□□□□□ -0.07
CHM-204ENST00000487515 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
CHM-204ENST00000487515 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
CHM-204ENST00000487515 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
CHM-204ENST00000487515 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
CHM-204ENST00000487515 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
CHM-204ENST00000487515 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
CHM-204ENST00000487515 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
CHM-204ENST00000487515 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
CHM-204ENST00000487515 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
CHM-204ENST00000487515 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
CHM-204ENST00000487515 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
CHM-204ENST00000487515 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
CHM-204ENST00000487515 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
CHM-204ENST00000487515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHM-204ENST00000487515 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
CHM-204ENST00000487515 POTEHQ6S545 545 aa12.02□□□□□ -0.49
CHM-204ENST00000487515 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
CHM-204ENST00000487515 DSG3P32926 999 aa11.97□□□□□ -0.49
CHM-204ENST00000487515 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
CHM-204ENST00000487515 CAPN15O75808 1086 aa11.88□□□□□ -0.51
CHM-204ENST00000487515 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
CHM-204ENST00000487515 APLP2Q06481 763 aa11.68□□□□□ -0.54
CHM-204ENST00000487515 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
CHM-204ENST00000487515 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
CHM-204ENST00000487515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.59□□□□□ -0.55
CHM-204ENST00000487515 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
CHM-204ENST00000487515 HNRNPUL2Q1KMD3 747 aaKnown RBP11.59□□□□□ -0.55
CHM-204ENST00000487515 ABCB7O75027 752 aa11.54□□□□□ -0.56
CHM-204ENST00000487515 KCNA4P22459 653 aa11.5□□□□□ -0.57
CHM-204ENST00000487515 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
CHM-204ENST00000487515 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
CHM-204ENST00000487515 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
CHM-204ENST00000487515 POLA2Q14181 598 aa11.23□□□□□ -0.61
CHM-204ENST00000487515 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
CHM-204ENST00000487515 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
CHM-204ENST00000487515 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
CHM-204ENST00000487515 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
CHM-204ENST00000487515 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
CHM-204ENST00000487515 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
CHM-204ENST00000487515 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
CHM-204ENST00000487515 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CHM-204ENST00000487515 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
CHM-204ENST00000487515 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
CHM-204ENST00000487515 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHM-204ENST00000487515 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
CHM-204ENST00000487515 PITPNM1O00562 1244 aa10.85□□□□□ -0.67
CHM-204ENST00000487515 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
CHM-204ENST00000487515 HAX1O00165 279 aa10.83□□□□□ -0.68
CHM-204ENST00000487515 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
CHM-204ENST00000487515 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
CHM-204ENST00000487515 ATXN8OSP0DMR3 200 aa10.67□□□□□ -0.7
CHM-204ENST00000487515 EVX2Q03828 476 aa10.67□□□□□ -0.7
CHM-204ENST00000487515 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
CHM-204ENST00000487515 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
CHM-204ENST00000487515 FBLN2P98095 1184 aa10.57□□□□□ -0.72
CHM-204ENST00000487515 ZBTB22O15209 634 aa10.56□□□□□ -0.72
CHM-204ENST00000487515 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
CHM-204ENST00000487515 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
CHM-204ENST00000487515 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
CHM-204ENST00000487515 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
CHM-204ENST00000487515 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
CHM-204ENST00000487515 CLEC11AQ9Y240 323 aa10.46□□□□□ -0.73
CHM-204ENST00000487515 GABBR2O75899 941 aa10.44□□□□□ -0.74
CHM-204ENST00000487515 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
CHM-204ENST00000487515 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
CHM-204ENST00000487515 LHX8Q68G74 356 aa10.4□□□□□ -0.74
CHM-204ENST00000487515 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
CHM-204ENST00000487515 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
CHM-204ENST00000487515 CLCN6P51797 869 aa10.28□□□□□ -0.76
CHM-204ENST00000487515 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHM-204ENST00000487515 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
CHM-204ENST00000487515 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
CHM-204ENST00000487515 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
CHM-204ENST00000487515 FKBP8Q14318 412 aa10.08□□□□□ -0.8
CHM-204ENST00000487515 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
CHM-204ENST00000487515 DCBLD2Q96PD2 775 aa10.06□□□□□ -0.8
CHM-204ENST00000487515 ZRANB1Q9UGI0 708 aa9.97□□□□□ -0.81
CHM-204ENST00000487515 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
CHM-204ENST00000487515 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
CHM-204ENST00000487515 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
CHM-204ENST00000487515 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
CHM-204ENST00000487515 OTUD5Q96G74 571 aa9.92□□□□□ -0.82
CHM-204ENST00000487515 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
CHM-204ENST00000487515 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
CHM-204ENST00000487515 POTEMA6NI47 508 aa9.79□□□□□ -0.84
CHM-204ENST00000487515 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
CHM-204ENST00000487515 NPM1P06748 294 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHM-204ENST00000487515 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
CHM-204ENST00000487515 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms