RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 A0A1B0GVX0 72 aa10.66□□□□□ -0.7
PDLIM7-207ENST00000486828 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
PDLIM7-207ENST00000486828 CIRBP-AS1Q8TBR5 109 aa10.66□□□□□ -0.7
PDLIM7-207ENST00000486828 FRAS1Q86XX4 4008 aa10.65□□□□□ -0.7
PDLIM7-207ENST00000486828 CDK2AP2O75956 126 aa10.64□□□□□ -0.71
PDLIM7-207ENST00000486828 IGHV6-1A0A0B4J1U7 121 aa10.63□□□□□ -0.71
PDLIM7-207ENST00000486828 TP53AIP1Q9HCN2 124 aa10.63□□□□□ -0.71
PDLIM7-207ENST00000486828 PRR4Q16378 134 aa10.62□□□□□ -0.71
PDLIM7-207ENST00000486828 SPANXA2-OT1Q8N9U9 137 aa10.61□□□□□ -0.71
PDLIM7-207ENST00000486828 FAT2Q9NYQ8 4349 aa10.59□□□□□ -0.71
PDLIM7-207ENST00000486828 SSBP3-AS1Q7Z2R9 100 aa10.58□□□□□ -0.72
PDLIM7-207ENST00000486828 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
PDLIM7-207ENST00000486828 DNAH5Q8TE73 4624 aa10.58□□□□□ -0.72
PDLIM7-207ENST00000486828 Q6ZSA8 131 aa10.58□□□□□ -0.72
PDLIM7-207ENST00000486828 MRPL34Q9BQ48 92 aaKnown RBP10.56□□□□□ -0.72
PDLIM7-207ENST00000486828 DNAH11Q96DT5 4516 aa10.55□□□□□ -0.72
PDLIM7-207ENST00000486828 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
PDLIM7-207ENST00000486828 A0A087X002 238 aa10.54□□□□□ -0.72
PDLIM7-207ENST00000486828 NOTCH2NLQ7Z3S9 236 aa10.54□□□□□ -0.72
PDLIM7-207ENST00000486828 NDUFS5O43920 106 aa10.53□□□□□ -0.72
PDLIM7-207ENST00000486828 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.72
PDLIM7-207ENST00000486828 Q1T7F1 81 aa10.48□□□□□ -0.73
PDLIM7-207ENST00000486828 PKD1P98161 4303 aa10.48□□□□□ -0.73
PDLIM7-207ENST00000486828 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
PDLIM7-207ENST00000486828 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.73
PDLIM7-207ENST00000486828 KRTAP13-2Q52LG2 175 aa10.46□□□□□ -0.74
PDLIM7-207ENST00000486828 KTN1-AS1Q86SY8 53 aa10.45□□□□□ -0.74
PDLIM7-207ENST00000486828 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
PDLIM7-207ENST00000486828 C8orf87E5RJ46 101 aa10.43□□□□□ -0.74
PDLIM7-207ENST00000486828 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
PDLIM7-207ENST00000486828 H3BS24 57 aa10.41□□□□□ -0.74
PDLIM7-207ENST00000486828 EPPK1P58107 5090 aaKnown RBP10.39□□□□□ -0.75
PDLIM7-207ENST00000486828 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
PDLIM7-207ENST00000486828 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
PDLIM7-207ENST00000486828 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
PDLIM7-207ENST00000486828 KRTAP13-3Q3SY46 172 aa10.37□□□□□ -0.75
PDLIM7-207ENST00000486828 Q5W150 140 aa10.36□□□□□ -0.75
PDLIM7-207ENST00000486828 LOC101927531A0A1B0GV80 90 aa10.35□□□□□ -0.75
PDLIM7-207ENST00000486828 COA5Q86WW8 74 aa10.35□□□□□ -0.75
PDLIM7-207ENST00000486828 LINC00313P59037 77 aa10.33□□□□□ -0.76
PDLIM7-207ENST00000486828 LIMD2Q9BT23 127 aa10.31□□□□□ -0.76
PDLIM7-207ENST00000486828 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
PDLIM7-207ENST00000486828 PSPHP1O15172 72 aa10.3□□□□□ -0.76
PDLIM7-207ENST00000486828 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
PDLIM7-207ENST00000486828 DYNC1H1Q14204 4646 aaKnown RBP10.27□□□□□ -0.77
PDLIM7-207ENST00000486828 A8MUN3 132 aa10.25□□□□□ -0.77
PDLIM7-207ENST00000486828 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
PDLIM7-207ENST00000486828 TYMSOSQ8TAI1 123 aa10.24□□□□□ -0.77
PDLIM7-207ENST00000486828 KRTAP16-1A8MUX0 517 aa10.22□□□□□ -0.77
PDLIM7-207ENST00000486828 HRES1P13985 223 aa10.22□□□□□ -0.77
PDLIM7-207ENST00000486828 VPS13BQ7Z7G8 4022 aa10.22□□□□□ -0.77
PDLIM7-207ENST00000486828 PRR26Q8N8Z3 221 aa10.21□□□□□ -0.78
PDLIM7-207ENST00000486828 SPINK1P00995 79 aa10.2□□□□□ -0.78
PDLIM7-207ENST00000486828 Q5VV11 94 aa10.2□□□□□ -0.78
PDLIM7-207ENST00000486828 PRR15LQ9BU68 103 aa10.16□□□□□ -0.78
PDLIM7-207ENST00000486828 LCA10Q71F78 164 aa10.15□□□□□ -0.79
PDLIM7-207ENST00000486828 RETNLBQ9BQ08 111 aa10.15□□□□□ -0.79
PDLIM7-207ENST00000486828 IGKV2-30P06310 120 aa10.14□□□□□ -0.79
PDLIM7-207ENST00000486828 APOBP04114 4563 aaKnown RBP10.14□□□□□ -0.79
PDLIM7-207ENST00000486828 BIRC6Q9NR09 4857 aa10.14□□□□□ -0.79
PDLIM7-207ENST00000486828 ATP11AUNQ6ZP68 121 aa10.13□□□□□ -0.79
PDLIM7-207ENST00000486828 RPS29P62273 56 aaKnown RBP10.11□□□□□ -0.79
PDLIM7-207ENST00000486828 LINC01558Q9Y6Z2 57 aa10.11□□□□□ -0.79
PDLIM7-207ENST00000486828 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
PDLIM7-207ENST00000486828 ACYP2P14621 99 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 SPAG11AQ6PDA7 123 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 A6NN06 94 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 Q75L30 129 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 KIAA1109Q2LD37 5005 aa10.09□□□□□ -0.79
PDLIM7-207ENST00000486828 C7orf65Q6ZTY9 151 aa10.08□□□□□ -0.8
PDLIM7-207ENST00000486828 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
PDLIM7-207ENST00000486828 HSPG2P98160 4391 aa10.02□□□□□ -0.81
PDLIM7-207ENST00000486828 RYR1P21817 5038 aa10.02□□□□□ -0.81
PDLIM7-207ENST00000486828 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
PDLIM7-207ENST00000486828 FAT1Q14517 4588 aa10□□□□□ -0.81
PDLIM7-207ENST00000486828 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
PDLIM7-207ENST00000486828 A6NED7 52 aa9.95□□□□□ -0.82
PDLIM7-207ENST00000486828 A8MU10 97 aa9.95□□□□□ -0.82
PDLIM7-207ENST00000486828 KRTAP17-1Q9BYP8 105 aa9.94□□□□□ -0.82
PDLIM7-207ENST00000486828 HERC2O95714 4834 aa9.89□□□□□ -0.83
PDLIM7-207ENST00000486828 PKHD1L1Q86WI1 4243 aa9.88□□□□□ -0.83
PDLIM7-207ENST00000486828 CDC42SE1Q9NRR8 79 aa9.86□□□□□ -0.83
PDLIM7-207ENST00000486828 SPINK7P58062 85 aa9.84□□□□□ -0.83
PDLIM7-207ENST00000486828 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
PDLIM7-207ENST00000486828 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
PDLIM7-207ENST00000486828 A8MUU9 505 aa9.82□□□□□ -0.84
PDLIM7-207ENST00000486828 LINC01554Q52M75 96 aa9.82□□□□□ -0.84
PDLIM7-207ENST00000486828 Q5VSD8 79 aa9.82□□□□□ -0.84
PDLIM7-207ENST00000486828 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
PDLIM7-207ENST00000486828 Q8N1X5 172 aa9.8□□□□□ -0.84
PDLIM7-207ENST00000486828 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
PDLIM7-207ENST00000486828 A0A1B0GU69 56 aa9.76□□□□□ -0.85
PDLIM7-207ENST00000486828 ABCA13Q86UQ4 5058 aa9.7□□□□□ -0.86
PDLIM7-207ENST00000486828 FLG2Q5D862 2391 aaPredicted RBP9.69□□□□□ -0.86
PDLIM7-207ENST00000486828 MYCBP2O75592 4640 aa9.62□□□□□ -0.87
PDLIM7-207ENST00000486828 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
PDLIM7-207ENST00000486828 PCLOQ9Y6V0 5065 aa9.62□□□□□ -0.87
PDLIM7-207ENST00000486828 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms