RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 Q96NJ1 140 aa6.73□□□□□ -1.33
SLX4-203ENST00000486524 PRR4Q16378 134 aa6.73□□□□□ -1.33
SLX4-203ENST00000486524 MP68P56378 58 aa6.72□□□□□ -1.33
SLX4-203ENST00000486524 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
SLX4-203ENST00000486524 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
SLX4-203ENST00000486524 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
SLX4-203ENST00000486524 MMP24-AS1A0A0U1RRL7 71 aa6.71□□□□□ -1.34
SLX4-203ENST00000486524 IGHV6-1A0A0B4J1U7 121 aa6.7□□□□□ -1.34
SLX4-203ENST00000486524 H0Y9P7 68 aa6.7□□□□□ -1.34
SLX4-203ENST00000486524 PKD1P98161 4303 aa6.69□□□□□ -1.34
SLX4-203ENST00000486524 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
SLX4-203ENST00000486524 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
SLX4-203ENST00000486524 CDK2AP2O75956 126 aa6.68□□□□□ -1.34
SLX4-203ENST00000486524 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
SLX4-203ENST00000486524 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
SLX4-203ENST00000486524 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.34
SLX4-203ENST00000486524 NDUFS5O43920 106 aa6.65□□□□□ -1.34
SLX4-203ENST00000486524 Q5VV11 94 aa6.65□□□□□ -1.34
SLX4-203ENST00000486524 PRR26Q8N8Z3 221 aa6.65□□□□□ -1.34
SLX4-203ENST00000486524 C8orf17Q9NRJ1 99 aa6.65□□□□□ -1.34
SLX4-203ENST00000486524 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
SLX4-203ENST00000486524 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
SLX4-203ENST00000486524 A0A087X002 238 aa6.64□□□□□ -1.35
SLX4-203ENST00000486524 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
SLX4-203ENST00000486524 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
SLX4-203ENST00000486524 C8orf87E5RJ46 101 aa6.61□□□□□ -1.35
SLX4-203ENST00000486524 PKHD1P08F94 4074 aa6.6□□□□□ -1.35
SLX4-203ENST00000486524 Q6ZSA8 131 aa6.6□□□□□ -1.35
SLX4-203ENST00000486524 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 ATP11AUNQ6ZP68 121 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 LCA10Q71F78 164 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 PCOTHQ58A44 107 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 A6NN06 94 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 H3BPC8 53 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
SLX4-203ENST00000486524 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
SLX4-203ENST00000486524 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
SLX4-203ENST00000486524 SSBP3-AS1Q7Z2R9 100 aa6.57□□□□□ -1.36
SLX4-203ENST00000486524 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
SLX4-203ENST00000486524 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
SLX4-203ENST00000486524 A6NED7 52 aa6.55□□□□□ -1.36
SLX4-203ENST00000486524 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
SLX4-203ENST00000486524 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
SLX4-203ENST00000486524 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
SLX4-203ENST00000486524 LIMD2Q9BT23 127 aa6.52□□□□□ -1.37
SLX4-203ENST00000486524 KRTAP21-3Q3LHN1 58 aa6.51□□□□□ -1.37
SLX4-203ENST00000486524 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
SLX4-203ENST00000486524 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
SLX4-203ENST00000486524 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
SLX4-203ENST00000486524 Q5W150 140 aa6.49□□□□□ -1.37
SLX4-203ENST00000486524 RETNLBQ9BQ08 111 aa6.48□□□□□ -1.37
SLX4-203ENST00000486524 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
SLX4-203ENST00000486524 LINC00313P59037 77 aa6.47□□□□□ -1.37
SLX4-203ENST00000486524 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
SLX4-203ENST00000486524 Q75L30 129 aa6.46□□□□□ -1.38
SLX4-203ENST00000486524 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
SLX4-203ENST00000486524 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
SLX4-203ENST00000486524 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
SLX4-203ENST00000486524 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
SLX4-203ENST00000486524 COA5Q86WW8 74 aa6.44□□□□□ -1.38
SLX4-203ENST00000486524 FAT1Q14517 4588 aa6.41□□□□□ -1.38
SLX4-203ENST00000486524 LOC101927531A0A1B0GV80 90 aa6.41□□□□□ -1.38
SLX4-203ENST00000486524 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
SLX4-203ENST00000486524 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
SLX4-203ENST00000486524 KMT2CQ8NEZ4 4911 aaKnown RBP6.36□□□□□ -1.39
SLX4-203ENST00000486524 SPINK1P00995 79 aa6.36□□□□□ -1.39
SLX4-203ENST00000486524 HRES1P13985 223 aa6.36□□□□□ -1.39
SLX4-203ENST00000486524 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
SLX4-203ENST00000486524 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
SLX4-203ENST00000486524 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
SLX4-203ENST00000486524 SPINK7P58062 85 aa6.35□□□□□ -1.39
SLX4-203ENST00000486524 LINC00304Q8N9R0 145 aa6.35□□□□□ -1.39
SLX4-203ENST00000486524 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
SLX4-203ENST00000486524 RYR2Q92736 4967 aa6.34□□□□□ -1.39
SLX4-203ENST00000486524 A0A1B0GVY2 172 aa6.34□□□□□ -1.4
SLX4-203ENST00000486524 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
SLX4-203ENST00000486524 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
SLX4-203ENST00000486524 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
SLX4-203ENST00000486524 C9orf92A6NGG3 77 aa6.26□□□□□ -1.41
SLX4-203ENST00000486524 ACYP2P14621 99 aa6.26□□□□□ -1.41
SLX4-203ENST00000486524 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
SLX4-203ENST00000486524 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
SLX4-203ENST00000486524 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
SLX4-203ENST00000486524 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
SLX4-203ENST00000486524 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
SLX4-203ENST00000486524 Q8N1X5 172 aa6.16□□□□□ -1.42
SLX4-203ENST00000486524 RYR3Q15413 4870 aa6.16□□□□□ -1.42
SLX4-203ENST00000486524 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
SLX4-203ENST00000486524 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
SLX4-203ENST00000486524 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
SLX4-203ENST00000486524 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
SLX4-203ENST00000486524 HSPG2P98160 4391 aa6.13□□□□□ -1.43
SLX4-203ENST00000486524 Q5VSD8 79 aa6.1□□□□□ -1.43
SLX4-203ENST00000486524 TNXBP22105 4242 aa6.1□□□□□ -1.43
SLX4-203ENST00000486524 A8MUU9 505 aa6.1□□□□□ -1.43
SLX4-203ENST00000486524 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
SLX4-203ENST00000486524 DMBT1Q9UGM3 2413 aaPredicted RBP6.09□□□□□ -1.43
SLX4-203ENST00000486524 A0A1B0GU69 56 aa6.08□□□□□ -1.44
SLX4-203ENST00000486524 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
SLX4-203ENST00000486524 RYR1P21817 5038 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms