RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TEN1Q86WV5 123 aa6.67□□□□□ -1.34
U2AF1-211ENST00000486519 PAM16Q9Y3D7 125 aa6.66□□□□□ -1.34
U2AF1-211ENST00000486519 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.34
U2AF1-211ENST00000486519 SPATA45Q537H7 98 aa6.65□□□□□ -1.34
U2AF1-211ENST00000486519 SNHG12Q9BXW3 62 aa6.65□□□□□ -1.34
U2AF1-211ENST00000486519 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
U2AF1-211ENST00000486519 IGHV6-1A0A0B4J1U7 121 aa6.63□□□□□ -1.35
U2AF1-211ENST00000486519 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
U2AF1-211ENST00000486519 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
U2AF1-211ENST00000486519 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
U2AF1-211ENST00000486519 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
U2AF1-211ENST00000486519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.6□□□□□ -1.35
U2AF1-211ENST00000486519 KRTAP4-9Q9BYQ8 210 aa6.59□□□□□ -1.35
U2AF1-211ENST00000486519 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
U2AF1-211ENST00000486519 FAM236AA0A1B0GUQ0 79 aa6.58□□□□□ -1.36
U2AF1-211ENST00000486519 FAM236BA0A1B0GV22 79 aa6.58□□□□□ -1.36
U2AF1-211ENST00000486519 COX8AP10176 69 aa6.58□□□□□ -1.36
U2AF1-211ENST00000486519 C14orf144Q96I85 54 aa6.58□□□□□ -1.36
U2AF1-211ENST00000486519 TSTD3H0UI37 97 aa6.57□□□□□ -1.36
U2AF1-211ENST00000486519 VAMP3Q15836 100 aa6.57□□□□□ -1.36
U2AF1-211ENST00000486519 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
U2AF1-211ENST00000486519 UQCR10Q9UDW1 63 aa6.56□□□□□ -1.36
U2AF1-211ENST00000486519 DLEU1O43261 78 aa6.55□□□□□ -1.36
U2AF1-211ENST00000486519 IFITM1P13164 125 aa6.53□□□□□ -1.36
U2AF1-211ENST00000486519 COPS9Q8WXC6 57 aa6.53□□□□□ -1.36
U2AF1-211ENST00000486519 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
U2AF1-211ENST00000486519 NDUFV3P56181 108 aaKnown RBP6.51□□□□□ -1.37
U2AF1-211ENST00000486519 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
U2AF1-211ENST00000486519 HIGD1BQ9P298 99 aa6.5□□□□□ -1.37
U2AF1-211ENST00000486519 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
U2AF1-211ENST00000486519 A0A1B0GVX0 72 aa6.47□□□□□ -1.37
U2AF1-211ENST00000486519 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
U2AF1-211ENST00000486519 C2orf91Q6ZV80 131 aa6.47□□□□□ -1.37
U2AF1-211ENST00000486519 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
U2AF1-211ENST00000486519 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
U2AF1-211ENST00000486519 HSD52Q0P140 79 aa6.46□□□□□ -1.38
U2AF1-211ENST00000486519 A0A1B0GV90 55 aa6.45□□□□□ -1.38
U2AF1-211ENST00000486519 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
U2AF1-211ENST00000486519 H3BMG7 143 aa6.44□□□□□ -1.38
U2AF1-211ENST00000486519 M0R143 59 aa6.43□□□□□ -1.38
U2AF1-211ENST00000486519 CEND1Q8N111 149 aa6.43□□□□□ -1.38
U2AF1-211ENST00000486519 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
U2AF1-211ENST00000486519 MT1XP80297 61 aa6.39□□□□□ -1.39
U2AF1-211ENST00000486519 BATFQ16520 125 aa6.39□□□□□ -1.39
U2AF1-211ENST00000486519 A0A1B0GV72 72 aa6.38□□□□□ -1.39
U2AF1-211ENST00000486519 FXYD2P54710 66 aa6.38□□□□□ -1.39
U2AF1-211ENST00000486519 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
U2AF1-211ENST00000486519 BVES-AS1Q5T3Y7 98 aa6.37□□□□□ -1.39
U2AF1-211ENST00000486519 AHNAK2Q8IVF2 5795 aa6.36□□□□□ -1.39
U2AF1-211ENST00000486519 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
U2AF1-211ENST00000486519 TRBV7-4A0A0J9YYF1 115 aa6.36□□□□□ -1.39
U2AF1-211ENST00000486519 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
U2AF1-211ENST00000486519 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
U2AF1-211ENST00000486519 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
U2AF1-211ENST00000486519 HMCN1Q96RW7 5635 aa6.33□□□□□ -1.4
U2AF1-211ENST00000486519 K7ERJ3 54 aa6.31□□□□□ -1.4
U2AF1-211ENST00000486519 FABP2P12104 132 aa6.31□□□□□ -1.4
U2AF1-211ENST00000486519 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
U2AF1-211ENST00000486519 PSMB2P49721 201 aa6.29□□□□□ -1.4
U2AF1-211ENST00000486519 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
U2AF1-211ENST00000486519 ANKRD29Q8N6D5 301 aa6.29□□□□□ -1.4
U2AF1-211ENST00000486519 COX6CP09669 75 aa6.28□□□□□ -1.4
U2AF1-211ENST00000486519 RBM3P98179 157 aaKnown RBP6.28□□□□□ -1.4
U2AF1-211ENST00000486519 COL5A1-AS1Q5SY13 56 aa6.28□□□□□ -1.4
U2AF1-211ENST00000486519 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
U2AF1-211ENST00000486519 DSCR8Q96T75 97 aa6.27□□□□□ -1.41
U2AF1-211ENST00000486519 SCGB1C2P0DMR2 95 aa6.26□□□□□ -1.41
U2AF1-211ENST00000486519 SNCGO76070 127 aa6.25□□□□□ -1.41
U2AF1-211ENST00000486519 CCKP06307 115 aa6.25□□□□□ -1.41
U2AF1-211ENST00000486519 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
U2AF1-211ENST00000486519 TRACP01848 142 aa6.24□□□□□ -1.41
U2AF1-211ENST00000486519 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
U2AF1-211ENST00000486519 H0YGX0 51 aa6.23□□□□□ -1.41
U2AF1-211ENST00000486519 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
U2AF1-211ENST00000486519 C9orf118A6NHY6 69 aa6.22□□□□□ -1.41
U2AF1-211ENST00000486519 TRIAP1O43715 76 aa6.22□□□□□ -1.41
U2AF1-211ENST00000486519 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
U2AF1-211ENST00000486519 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
U2AF1-211ENST00000486519 PCP4P48539 62 aa6.21□□□□□ -1.42
U2AF1-211ENST00000486519 LCA10Q71F78 164 aa6.21□□□□□ -1.42
U2AF1-211ENST00000486519 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
U2AF1-211ENST00000486519 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
U2AF1-211ENST00000486519 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
U2AF1-211ENST00000486519 DNAL4O96015 105 aa6.19□□□□□ -1.42
U2AF1-211ENST00000486519 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
U2AF1-211ENST00000486519 S4R3F8 94 aa6.19□□□□□ -1.42
U2AF1-211ENST00000486519 A0A1W2PPM0 123 aa6.18□□□□□ -1.42
U2AF1-211ENST00000486519 A0A1B0GX51 115 aa6.17□□□□□ -1.42
U2AF1-211ENST00000486519 ATXN8Q156A1 80 aa6.17□□□□□ -1.42
U2AF1-211ENST00000486519 Q6ZVQ6 151 aa6.17□□□□□ -1.42
U2AF1-211ENST00000486519 UBE2V1Q13404 147 aa6.16□□□□□ -1.42
U2AF1-211ENST00000486519 C21orf62-AS1Q17RA5 79 aa6.15□□□□□ -1.42
U2AF1-211ENST00000486519 PRR15Q8IV56 129 aa6.15□□□□□ -1.42
U2AF1-211ENST00000486519 VPS25Q9BRG1 176 aa6.15□□□□□ -1.42
U2AF1-211ENST00000486519 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.42
U2AF1-211ENST00000486519 Q5W150 140 aa6.14□□□□□ -1.43
U2AF1-211ENST00000486519 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
U2AF1-211ENST00000486519 J3KT08 172 aa6.12□□□□□ -1.43
U2AF1-211ENST00000486519 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
U2AF1-211ENST00000486519 KRTAP5-7Q6L8G8 165 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms