RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 MEGF8Q7Z7M0 2845 aa13.37□□□□□ -0.27
CLN5-202ENST00000485938 RTL8CO15255 209 aa13.37□□□□□ -0.27
CLN5-202ENST00000485938 HECTD4Q9Y4D8 3996 aa13.37□□□□□ -0.27
CLN5-202ENST00000485938 VPS13DQ5THJ4 4388 aa13.36□□□□□ -0.27
CLN5-202ENST00000485938 PLAC8Q9NZF1 115 aa13.35□□□□□ -0.27
CLN5-202ENST00000485938 DNAH8Q96JB1 4490 aa13.34□□□□□ -0.27
CLN5-202ENST00000485938 STARD9Q9P2P6 4700 aa13.32□□□□□ -0.28
CLN5-202ENST00000485938 HRES1P13985 223 aa13.3□□□□□ -0.28
CLN5-202ENST00000485938 LINC01558Q9Y6Z2 57 aa13.29□□□□□ -0.28
CLN5-202ENST00000485938 LCA10Q71F78 164 aa13.29□□□□□ -0.28
CLN5-202ENST00000485938 SPAG11AQ6PDA7 123 aa13.28□□□□□ -0.28
CLN5-202ENST00000485938 FRAS1Q86XX4 4008 aa13.27□□□□□ -0.28
CLN5-202ENST00000485938 A6NED7 52 aa13.27□□□□□ -0.28
CLN5-202ENST00000485938 Q5W150 140 aa13.23□□□□□ -0.29
CLN5-202ENST00000485938 SPINK6Q6UWN8 80 aa13.23□□□□□ -0.29
CLN5-202ENST00000485938 DNAH17Q9UFH2 4485 aa13.23□□□□□ -0.29
CLN5-202ENST00000485938 KRTAP13-3Q3SY46 172 aa13.23□□□□□ -0.29
CLN5-202ENST00000485938 SEC61GP60059 68 aa13.19□□□□□ -0.3
CLN5-202ENST00000485938 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
CLN5-202ENST00000485938 ATP11AUNQ6ZP68 121 aa13.19□□□□□ -0.3
CLN5-202ENST00000485938 SPTSSBQ8NFR3 76 aa13.17□□□□□ -0.3
CLN5-202ENST00000485938 DNAH2Q9P225 4427 aa13.17□□□□□ -0.3
CLN5-202ENST00000485938 CIRBP-AS1Q8TBR5 109 aa13.17□□□□□ -0.3
CLN5-202ENST00000485938 CDC42SE1Q9NRR8 79 aa13.17□□□□□ -0.3
CLN5-202ENST00000485938 FBN3Q75N90 2809 aa13.16□□□□□ -0.3
CLN5-202ENST00000485938 KMT2AQ03164 3969 aa13.14□□□□□ -0.31
CLN5-202ENST00000485938 C8orf87E5RJ46 101 aa13.09□□□□□ -0.31
CLN5-202ENST00000485938 SSBP3-AS1Q7Z2R9 100 aa13.08□□□□□ -0.31
CLN5-202ENST00000485938 PRR26Q8N8Z3 221 aa13.07□□□□□ -0.32
CLN5-202ENST00000485938 SPINK7P58062 85 aa13.07□□□□□ -0.32
CLN5-202ENST00000485938 C1orf134Q5TEV5 83 aa13.05□□□□□ -0.32
CLN5-202ENST00000485938 TGP01266 2768 aa13.05□□□□□ -0.32
CLN5-202ENST00000485938 A6NN06 94 aa13.05□□□□□ -0.32
CLN5-202ENST00000485938 KTN1-AS1Q86SY8 53 aa13.04□□□□□ -0.32
CLN5-202ENST00000485938 ACYP2P14621 99 aa13.02□□□□□ -0.33
CLN5-202ENST00000485938 ALMS1Q8TCU4 4167 aa13.02□□□□□ -0.33
CLN5-202ENST00000485938 LINC00313P59037 77 aa12.99□□□□□ -0.33
CLN5-202ENST00000485938 DMAC1Q96GE9 116 aa12.97□□□□□ -0.33
CLN5-202ENST00000485938 FAM229AH3BQW9 127 aa12.95□□□□□ -0.34
CLN5-202ENST00000485938 KRTAP13-2Q52LG2 175 aa12.91□□□□□ -0.34
CLN5-202ENST00000485938 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
CLN5-202ENST00000485938 LY6G6CO95867 125 aa12.9□□□□□ -0.34
CLN5-202ENST00000485938 RETNLBQ9BQ08 111 aa12.9□□□□□ -0.34
CLN5-202ENST00000485938 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
CLN5-202ENST00000485938 IGKV2-30P06310 120 aa12.89□□□□□ -0.35
CLN5-202ENST00000485938 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
CLN5-202ENST00000485938 DNAH5Q8TE73 4624 aa12.84□□□□□ -0.35
CLN5-202ENST00000485938 KRTAP16-1A8MUX0 517 aa12.84□□□□□ -0.35
CLN5-202ENST00000485938 C7orf65Q6ZTY9 151 aa12.8□□□□□ -0.36
CLN5-202ENST00000485938 RBM12B-AS1Q9P1G2 102 aa12.78□□□□□ -0.36
CLN5-202ENST00000485938 Q6ZSA8 131 aa12.76□□□□□ -0.37
CLN5-202ENST00000485938 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
CLN5-202ENST00000485938 A0A1B0GU69 56 aa12.73□□□□□ -0.37
CLN5-202ENST00000485938 KRTAP1-4P0C5Y4 121 aa12.73□□□□□ -0.37
CLN5-202ENST00000485938 KRTAP10-1P60331 282 aa12.72□□□□□ -0.37
CLN5-202ENST00000485938 HYDINQ4G0P3 5121 aa12.71□□□□□ -0.37
CLN5-202ENST00000485938 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.38
CLN5-202ENST00000485938 IGKV2D-30A0A075B6S6 120 aa12.68□□□□□ -0.38
CLN5-202ENST00000485938 PKD1P98161 4303 aa12.64□□□□□ -0.39
CLN5-202ENST00000485938 SPATA8Q6RVD6 105 aa12.62□□□□□ -0.39
CLN5-202ENST00000485938 C4orf48Q5BLP8 95 aa12.56□□□□□ -0.4
CLN5-202ENST00000485938 PLA2G1BP04054 148 aaKnown RBP12.55□□□□□ -0.4
CLN5-202ENST00000485938 VPS13BQ7Z7G8 4022 aa12.55□□□□□ -0.4
CLN5-202ENST00000485938 UQCR11O14957 56 aa12.54□□□□□ -0.4
CLN5-202ENST00000485938 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
CLN5-202ENST00000485938 FAT2Q9NYQ8 4349 aa12.53□□□□□ -0.4
CLN5-202ENST00000485938 SPINK1P00995 79 aa12.53□□□□□ -0.4
CLN5-202ENST00000485938 MIR22HGQ0VDD5 57 aa12.53□□□□□ -0.4
CLN5-202ENST00000485938 PRAC1Q96KF2 57 aa12.44□□□□□ -0.42
CLN5-202ENST00000485938 ADM2Q7Z4H4 148 aa12.41□□□□□ -0.42
CLN5-202ENST00000485938 Q8N1X5 172 aa12.4□□□□□ -0.42
CLN5-202ENST00000485938 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
CLN5-202ENST00000485938 LINC00304Q8N9R0 145 aa12.36□□□□□ -0.43
CLN5-202ENST00000485938 RPS29P62273 56 aaKnown RBP12.35□□□□□ -0.43
CLN5-202ENST00000485938 PKHD1P08F94 4074 aa12.29□□□□□ -0.44
CLN5-202ENST00000485938 A8MUU9 505 aa12.2□□□□□ -0.46
CLN5-202ENST00000485938 C20orf166-AS1Q96NR2 134 aa12.2□□□□□ -0.46
CLN5-202ENST00000485938 C9orf92A6NGG3 77 aa12.17□□□□□ -0.46
CLN5-202ENST00000485938 KRTAP3-1Q9BYR8 98 aa12.15□□□□□ -0.46
CLN5-202ENST00000485938 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
CLN5-202ENST00000485938 H0YAA0 97 aa12.1□□□□□ -0.47
CLN5-202ENST00000485938 LINC01554Q52M75 96 aa12.1□□□□□ -0.47
CLN5-202ENST00000485938 DYNC1H1Q14204 4646 aaKnown RBP12.09□□□□□ -0.47
CLN5-202ENST00000485938 RYR2Q92736 4967 aa12.08□□□□□ -0.48
CLN5-202ENST00000485938 KMT2CQ8NEZ4 4911 aaKnown RBP12.08□□□□□ -0.48
CLN5-202ENST00000485938 PKHD1L1Q86WI1 4243 aa12.07□□□□□ -0.48
CLN5-202ENST00000485938 CSAG1Q6PB30 78 aa12.05□□□□□ -0.48
CLN5-202ENST00000485938 A0A1B0GU33 70 aa12□□□□□ -0.49
CLN5-202ENST00000485938 A0A1B0GVY2 172 aa12□□□□□ -0.49
CLN5-202ENST00000485938 KRTAP10-4P60372 401 aaPredicted RBP12□□□□□ -0.49
CLN5-202ENST00000485938 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
CLN5-202ENST00000485938 H1FX-AS1Q4G0G2 97 aa11.96□□□□□ -0.49
CLN5-202ENST00000485938 FAT1Q14517 4588 aa11.93□□□□□ -0.5
CLN5-202ENST00000485938 COX6B2Q6YFQ2 88 aa11.88□□□□□ -0.51
CLN5-202ENST00000485938 FLG2Q5D862 2391 aaPredicted RBP11.8□□□□□ -0.52
CLN5-202ENST00000485938 RYR3Q15413 4870 aa11.76□□□□□ -0.53
CLN5-202ENST00000485938 KRTAP25-1Q3LHN0 102 aa11.72□□□□□ -0.53
CLN5-202ENST00000485938 K7ERS5 55 aa11.64□□□□□ -0.55
CLN5-202ENST00000485938 FAT3Q8TDW7 4589 aa11.62□□□□□ -0.55
CLN5-202ENST00000485938 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms