RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 JMJD7-PLA2G4BH0Y9G9 81 aa5.23□□□□□ -1.57
SHROOM3-207ENST00000485780 RBM3P98179 157 aaKnown RBP5.23□□□□□ -1.57
SHROOM3-207ENST00000485780 MT-ATP8P03928 68 aa5.22□□□□□ -1.57
SHROOM3-207ENST00000485780 PCP4P48539 62 aa5.22□□□□□ -1.57
SHROOM3-207ENST00000485780 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
SHROOM3-207ENST00000485780 C1orf195Q5TG92 126 aa5.22□□□□□ -1.57
SHROOM3-207ENST00000485780 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
SHROOM3-207ENST00000485780 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
SHROOM3-207ENST00000485780 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
SHROOM3-207ENST00000485780 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
SHROOM3-207ENST00000485780 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
SHROOM3-207ENST00000485780 A0A1B0GV72 72 aa5.2□□□□□ -1.58
SHROOM3-207ENST00000485780 SS18L2Q9UHA2 77 aa5.2□□□□□ -1.58
SHROOM3-207ENST00000485780 A0A087WSZ3 146 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 CCKP06307 115 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 Q6ZQT0 140 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 DSCR8Q96T75 97 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 MUC2Q02817 5179 aa5.19□□□□□ -1.58
SHROOM3-207ENST00000485780 H3BS24 57 aa5.18□□□□□ -1.58
SHROOM3-207ENST00000485780 PDE6GP18545 87 aa5.18□□□□□ -1.58
SHROOM3-207ENST00000485780 A0A1B0GW54 56 aa5.17□□□□□ -1.58
SHROOM3-207ENST00000485780 LINC00643Q86TS7 51 aa5.17□□□□□ -1.58
SHROOM3-207ENST00000485780 Q96NJ1 140 aa5.17□□□□□ -1.58
SHROOM3-207ENST00000485780 C14orf132Q9NPU4 83 aa5.17□□□□□ -1.58
SHROOM3-207ENST00000485780 IMUPQ9GZP8 106 aa5.15□□□□□ -1.59
SHROOM3-207ENST00000485780 LINC00472Q9H8W2 130 aa5.13□□□□□ -1.59
SHROOM3-207ENST00000485780 LINC00846Q9NV44 126 aa5.13□□□□□ -1.59
SHROOM3-207ENST00000485780 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
SHROOM3-207ENST00000485780 C9orf92A6NGG3 77 aa5.06□□□□□ -1.6
SHROOM3-207ENST00000485780 J3KT08 172 aa5.06□□□□□ -1.6
SHROOM3-207ENST00000485780 IGKV4-1P06312 121 aa5.06□□□□□ -1.6
SHROOM3-207ENST00000485780 ATP5EP2Q5VTU8 51 aa5.06□□□□□ -1.6
SHROOM3-207ENST00000485780 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
SHROOM3-207ENST00000485780 HIST1H4AP62805 103 aaKnown RBP5.05□□□□□ -1.6
SHROOM3-207ENST00000485780 DEFB116Q30KQ4 102 aa5.04□□□□□ -1.6
SHROOM3-207ENST00000485780 UBL5Q9BZL1 73 aa5.04□□□□□ -1.6
SHROOM3-207ENST00000485780 IGKV3D-7A0A0C4DH55 119 aa5.02□□□□□ -1.61
SHROOM3-207ENST00000485780 A0A1B0GVX0 72 aa5.02□□□□□ -1.61
SHROOM3-207ENST00000485780 NREPQ16612 68 aa5.02□□□□□ -1.61
SHROOM3-207ENST00000485780 Q6ZVQ6 151 aa5.02□□□□□ -1.61
SHROOM3-207ENST00000485780 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 A8MWP4 228 aa5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 RPL37P61927 97 aaKnown RBP5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 CXCL6P80162 114 aa5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 Q75L30 129 aa5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 ANAPC13Q9BS18 74 aa5.01□□□□□ -1.61
SHROOM3-207ENST00000485780 C8orf87E5RJ46 101 aa5□□□□□ -1.61
SHROOM3-207ENST00000485780 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
SHROOM3-207ENST00000485780 FAM236AA0A1B0GUQ0 79 aa4.99□□□□□ -1.61
SHROOM3-207ENST00000485780 FAM236BA0A1B0GV22 79 aa4.99□□□□□ -1.61
SHROOM3-207ENST00000485780 A8MUU9 505 aa4.99□□□□□ -1.61
SHROOM3-207ENST00000485780 DSCR10P59022 87 aa4.99□□□□□ -1.61
SHROOM3-207ENST00000485780 LINC00313P59037 77 aa4.99□□□□□ -1.61
SHROOM3-207ENST00000485780 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
SHROOM3-207ENST00000485780 NDUFB1O75438 58 aa4.98□□□□□ -1.61
SHROOM3-207ENST00000485780 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
SHROOM3-207ENST00000485780 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
SHROOM3-207ENST00000485780 A0A087WVE0 104 aa4.96□□□□□ -1.62
SHROOM3-207ENST00000485780 BPY2O14599 106 aa4.96□□□□□ -1.62
SHROOM3-207ENST00000485780 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
SHROOM3-207ENST00000485780 K7EQZ3 153 aa4.95□□□□□ -1.62
SHROOM3-207ENST00000485780 ATOX1O00244 68 aa4.95□□□□□ -1.62
SHROOM3-207ENST00000485780 PCOTHQ58A44 107 aa4.95□□□□□ -1.62
SHROOM3-207ENST00000485780 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
SHROOM3-207ENST00000485780 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
SHROOM3-207ENST00000485780 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
SHROOM3-207ENST00000485780 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
SHROOM3-207ENST00000485780 UQCRQO14949 82 aa4.92□□□□□ -1.62
SHROOM3-207ENST00000485780 COX7CP15954 63 aa4.92□□□□□ -1.62
SHROOM3-207ENST00000485780 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
SHROOM3-207ENST00000485780 SERP2Q8N6R1 65 aa4.91□□□□□ -1.62
SHROOM3-207ENST00000485780 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
SHROOM3-207ENST00000485780 Q8N9L7 120 aa4.9□□□□□ -1.63
SHROOM3-207ENST00000485780 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
SHROOM3-207ENST00000485780 SMIM20Q8N5G0 67 aa4.89□□□□□ -1.63
SHROOM3-207ENST00000485780 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
SHROOM3-207ENST00000485780 MRPL34Q9BQ48 92 aaKnown RBP4.88□□□□□ -1.63
SHROOM3-207ENST00000485780 TRAV7A0A075B6U4 112 aa4.87□□□□□ -1.63
SHROOM3-207ENST00000485780 HCG22E2RYF7 251 aa4.85□□□□□ -1.63
SHROOM3-207ENST00000485780 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
SHROOM3-207ENST00000485780 CASC2Q6XLA1 102 aa4.85□□□□□ -1.63
SHROOM3-207ENST00000485780 ZCCHC13Q8WW36 166 aaKnown RBP4.85□□□□□ -1.63
SHROOM3-207ENST00000485780 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
SHROOM3-207ENST00000485780 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
SHROOM3-207ENST00000485780 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
SHROOM3-207ENST00000485780 COX6B2Q6YFQ2 88 aa4.81□□□□□ -1.64
SHROOM3-207ENST00000485780 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
SHROOM3-207ENST00000485780 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
SHROOM3-207ENST00000485780 MT1HP80294 61 aa4.78□□□□□ -1.64
SHROOM3-207ENST00000485780 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
SHROOM3-207ENST00000485780 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
SHROOM3-207ENST00000485780 NDUFS5O43920 106 aa4.77□□□□□ -1.65
SHROOM3-207ENST00000485780 HRES1P13985 223 aa4.77□□□□□ -1.65
SHROOM3-207ENST00000485780 Q5W150 140 aa4.77□□□□□ -1.65
SHROOM3-207ENST00000485780 M0R2T5 61 aa4.76□□□□□ -1.65
SHROOM3-207ENST00000485780 C20orf197Q8N268 126 aa4.76□□□□□ -1.65
SHROOM3-207ENST00000485780 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms