RNA–Protein interactions for RNA: ENST00000484986.1

PTPRN-215, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-215ENST00000484986 A0A1B0GV72 72 aa11.01□□□□□ -0.65
PTPRN-215ENST00000484986 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
PTPRN-215ENST00000484986 LINC00472Q9H8W2 130 aa11.01□□□□□ -0.65
PTPRN-215ENST00000484986 LYRM7Q5U5X0 104 aa11□□□□□ -0.65
PTPRN-215ENST00000484986 NOTCH2NLQ7Z3S9 236 aa11□□□□□ -0.65
PTPRN-215ENST00000484986 FCGBPQ9Y6R7 5405 aaPredicted RBP11□□□□□ -0.65
PTPRN-215ENST00000484986 IGHV6-1A0A0B4J1U7 121 aa10.99□□□□□ -0.65
PTPRN-215ENST00000484986 DEFB116Q30KQ4 102 aa10.99□□□□□ -0.65
PTPRN-215ENST00000484986 MT1FP04733 61 aa10.98□□□□□ -0.65
PTPRN-215ENST00000484986 CCKP06307 115 aa10.98□□□□□ -0.65
PTPRN-215ENST00000484986 UBE2V1Q13404 147 aa10.98□□□□□ -0.65
PTPRN-215ENST00000484986 BAALC-AS2P0C853 105 aa10.97□□□□□ -0.65
PTPRN-215ENST00000484986 KRTAP10-10P60014 251 aa10.97□□□□□ -0.65
PTPRN-215ENST00000484986 MTURNQ8N3F0 131 aa10.96□□□□□ -0.65
PTPRN-215ENST00000484986 C9orf118A6NHY6 69 aa10.93□□□□□ -0.66
PTPRN-215ENST00000484986 C8orf87E5RJ46 101 aa10.93□□□□□ -0.66
PTPRN-215ENST00000484986 LCE2BO14633 110 aa10.93□□□□□ -0.66
PTPRN-215ENST00000484986 KRTAP9-3Q9BYQ3 159 aa10.93□□□□□ -0.66
PTPRN-215ENST00000484986 TAX1BP3O14907 124 aa10.91□□□□□ -0.66
PTPRN-215ENST00000484986 RBM3P98179 157 aaKnown RBP10.9□□□□□ -0.66
PTPRN-215ENST00000484986 KRTAP19-1Q8IUB9 90 aa10.9□□□□□ -0.66
PTPRN-215ENST00000484986 A0A1B0GVX0 72 aa10.89□□□□□ -0.67
PTPRN-215ENST00000484986 DSCR8Q96T75 97 aa10.88□□□□□ -0.67
PTPRN-215ENST00000484986 A0A1W2PPM0 123 aa10.86□□□□□ -0.67
PTPRN-215ENST00000484986 VPS25Q9BRG1 176 aa10.86□□□□□ -0.67
PTPRN-215ENST00000484986 PCP4L1A6NKN8 68 aa10.85□□□□□ -0.67
PTPRN-215ENST00000484986 C9JAW5 83 aa10.85□□□□□ -0.67
PTPRN-215ENST00000484986 C21orf62-AS1Q17RA5 79 aa10.84□□□□□ -0.67
PTPRN-215ENST00000484986 ZCCHC13Q8WW36 166 aaKnown RBP10.84□□□□□ -0.67
PTPRN-215ENST00000484986 J3KT08 172 aa10.83□□□□□ -0.68
PTPRN-215ENST00000484986 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
PTPRN-215ENST00000484986 SPINK7P58062 85 aa10.82□□□□□ -0.68
PTPRN-215ENST00000484986 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
PTPRN-215ENST00000484986 MACF1Q9UPN3 7388 aaKnown RBP10.81□□□□□ -0.68
PTPRN-215ENST00000484986 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
PTPRN-215ENST00000484986 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
PTPRN-215ENST00000484986 NDUFB1O75438 58 aa10.75□□□□□ -0.69
PTPRN-215ENST00000484986 H3BT86 120 aa10.73□□□□□ -0.69
PTPRN-215ENST00000484986 Q8N9P0 234 aaPredicted RBP10.73□□□□□ -0.69
PTPRN-215ENST00000484986 Q6ZQT0 140 aa10.72□□□□□ -0.69
PTPRN-215ENST00000484986 SYNE2Q8WXH0 6885 aaKnown RBP10.72□□□□□ -0.69
PTPRN-215ENST00000484986 A8MWP4 228 aa10.71□□□□□ -0.69
PTPRN-215ENST00000484986 PDE6GP18545 87 aa10.71□□□□□ -0.69
PTPRN-215ENST00000484986 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
PTPRN-215ENST00000484986 LOC110117498A0A087WWA1 95 aa10.69□□□□□ -0.7
PTPRN-215ENST00000484986 WFDC13Q8IUB5 93 aa10.67□□□□□ -0.7
PTPRN-215ENST00000484986 KRTAP19-6Q3LI70 58 aa10.65□□□□□ -0.7
PTPRN-215ENST00000484986 A0A1B0GW54 56 aa10.64□□□□□ -0.71
PTPRN-215ENST00000484986 C8orf17Q9NRJ1 99 aa10.64□□□□□ -0.71
PTPRN-215ENST00000484986 K7EP34 96 aa10.62□□□□□ -0.71
PTPRN-215ENST00000484986 GTF2H5Q6ZYL4 71 aa10.58□□□□□ -0.72
PTPRN-215ENST00000484986 Q6ZVQ6 151 aa10.57□□□□□ -0.72
PTPRN-215ENST00000484986 IGKV3D-7A0A0C4DH55 119 aa10.56□□□□□ -0.72
PTPRN-215ENST00000484986 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
PTPRN-215ENST00000484986 NREPQ16612 68 aa10.54□□□□□ -0.72
PTPRN-215ENST00000484986 PRR15Q8IV56 129 aa10.51□□□□□ -0.73
PTPRN-215ENST00000484986 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
PTPRN-215ENST00000484986 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
PTPRN-215ENST00000484986 TMEM254Q8TBM7 123 aa10.46□□□□□ -0.73
PTPRN-215ENST00000484986 MRPL34Q9BQ48 92 aaKnown RBP10.46□□□□□ -0.73
PTPRN-215ENST00000484986 F8W1H4 67 aa10.45□□□□□ -0.74
PTPRN-215ENST00000484986 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
PTPRN-215ENST00000484986 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
PTPRN-215ENST00000484986 NDUFS5O43920 106 aa10.38□□□□□ -0.75
PTPRN-215ENST00000484986 BPY2O14599 106 aa10.36□□□□□ -0.75
PTPRN-215ENST00000484986 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
PTPRN-215ENST00000484986 KRTAP6-3Q3LI67 103 aa10.35□□□□□ -0.75
PTPRN-215ENST00000484986 UBL5Q9BZL1 73 aa10.32□□□□□ -0.76
PTPRN-215ENST00000484986 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
PTPRN-215ENST00000484986 K7EQZ3 153 aa10.31□□□□□ -0.76
PTPRN-215ENST00000484986 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
PTPRN-215ENST00000484986 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
PTPRN-215ENST00000484986 A0A1B0GV90 55 aa10.22□□□□□ -0.77
PTPRN-215ENST00000484986 Q5W150 140 aa10.22□□□□□ -0.77
PTPRN-215ENST00000484986 Q8N9L7 120 aa10.21□□□□□ -0.77
PTPRN-215ENST00000484986 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
PTPRN-215ENST00000484986 CASC2Q6XLA1 102 aa10.16□□□□□ -0.78
PTPRN-215ENST00000484986 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
PTPRN-215ENST00000484986 NEBP20929 6669 aa10.12□□□□□ -0.79
PTPRN-215ENST00000484986 ACYP1P07311 99 aa10.12□□□□□ -0.79
PTPRN-215ENST00000484986 CXCL6P80162 114 aa10.12□□□□□ -0.79
PTPRN-215ENST00000484986 FAM236AA0A1B0GUQ0 79 aa10.11□□□□□ -0.79
PTPRN-215ENST00000484986 FAM236BA0A1B0GV22 79 aa10.11□□□□□ -0.79
PTPRN-215ENST00000484986 C5orf47Q569G3 176 aa10.09□□□□□ -0.79
PTPRN-215ENST00000484986 A6NN06 94 aa10.07□□□□□ -0.8
PTPRN-215ENST00000484986 FAM240AA0A1B0GVK7 77 aa10.04□□□□□ -0.8
PTPRN-215ENST00000484986 Q5VV11 94 aa10.03□□□□□ -0.8
PTPRN-215ENST00000484986 CSAG1Q6PB30 78 aa10.02□□□□□ -0.81
PTPRN-215ENST00000484986 S4R3F8 94 aa10.01□□□□□ -0.81
PTPRN-215ENST00000484986 MUC12Q9UKN1 5478 aa10□□□□□ -0.81
PTPRN-215ENST00000484986 MT1BP07438 61 aa9.98□□□□□ -0.81
PTPRN-215ENST00000484986 SPRR2GQ9BYE4 73 aa9.97□□□□□ -0.81
PTPRN-215ENST00000484986 KRTAP3-1Q9BYR8 98 aa9.97□□□□□ -0.81
PTPRN-215ENST00000484986 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
PTPRN-215ENST00000484986 KRTAP19-8Q3LI54 63 aa9.94□□□□□ -0.82
PTPRN-215ENST00000484986 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
PTPRN-215ENST00000484986 LCA10Q71F78 164 aa9.92□□□□□ -0.82
PTPRN-215ENST00000484986 J3QR89 54 aa9.91□□□□□ -0.82
PTPRN-215ENST00000484986 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
PTPRN-215ENST00000484986 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms