RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CDC42BPGQ6DT37 1551 aa-0.53□□□□□ -2.49
SMC4-215ENST00000484799 MYO18BQ8IUG5 2567 aa-0.53□□□□□ -2.5
SMC4-215ENST00000484799 DUOX2Q9NRD8 1548 aa-0.54□□□□□ -2.5
SMC4-215ENST00000484799 KRTAP19-8Q3LI54 63 aa-0.54□□□□□ -2.5
SMC4-215ENST00000484799 SMCO4Q9NRQ5 59 aa-0.54□□□□□ -2.5
SMC4-215ENST00000484799 ITSN2Q9NZM3 1697 aa-0.54□□□□□ -2.5
SMC4-215ENST00000484799 NBEAL2Q6ZNJ1 2754 aa-0.55□□□□□ -2.5
SMC4-215ENST00000484799 ANK3Q12955 4377 aaKnown RBP-0.55□□□□□ -2.5
SMC4-215ENST00000484799 DEFB106AQ8N104 65 aa-0.55□□□□□ -2.5
SMC4-215ENST00000484799 DIP2AQ14689 1571 aa-0.55□□□□□ -2.5
SMC4-215ENST00000484799 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
SMC4-215ENST00000484799 PKHD1L1Q86WI1 4243 aa-0.56□□□□□ -2.5
SMC4-215ENST00000484799 PDCD5O14737 125 aa-0.56□□□□□ -2.5
SMC4-215ENST00000484799 S4R3F8 94 aa-0.56□□□□□ -2.5
SMC4-215ENST00000484799 MGAM2Q2M2H8 2515 aa-0.56□□□□□ -2.5
SMC4-215ENST00000484799 C3P01024 1663 aa-0.56□□□□□ -2.5
SMC4-215ENST00000484799 USP9YO00507 2555 aaPredicted RBP-0.56□□□□□ -2.5
SMC4-215ENST00000484799 VPS13DQ5THJ4 4388 aa-0.57□□□□□ -2.5
SMC4-215ENST00000484799 ANKRD36CQ5JPF3 1778 aa-0.57□□□□□ -2.5
SMC4-215ENST00000484799 FAT1Q14517 4588 aa-0.57□□□□□ -2.5
SMC4-215ENST00000484799 ABCA9Q8IUA7 1624 aa-0.58□□□□□ -2.5
SMC4-215ENST00000484799 STARD9Q9P2P6 4700 aa-0.59□□□□□ -2.5
SMC4-215ENST00000484799 MINOS1Q5TGZ0 78 aa-0.59□□□□□ -2.5
SMC4-215ENST00000484799 DOPEY1Q5JWR5 2465 aa-0.59□□□□□ -2.5
SMC4-215ENST00000484799 APOBP04114 4563 aaKnown RBP-0.59□□□□□ -2.5
SMC4-215ENST00000484799 KIF1AQ12756 1690 aa-0.59□□□□□ -2.5
SMC4-215ENST00000484799 WT1-ASQ06250 92 aa-0.6□□□□□ -2.51
SMC4-215ENST00000484799 UBR4Q5T4S7 5183 aa-0.6□□□□□ -2.51
SMC4-215ENST00000484799 USH2AO75445 5202 aa-0.6□□□□□ -2.51
SMC4-215ENST00000484799 GNG13Q9P2W3 67 aa-0.61□□□□□ -2.51
SMC4-215ENST00000484799 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.61□□□□□ -2.51
SMC4-215ENST00000484799 HILPDAQ9Y5L2 63 aa-0.61□□□□□ -2.51
SMC4-215ENST00000484799 ASXL1Q8IXJ9 1541 aa-0.61□□□□□ -2.51
SMC4-215ENST00000484799 RYR3Q15413 4870 aa-0.61□□□□□ -2.51
SMC4-215ENST00000484799 MROH1Q8NDA8 1641 aa-0.61□□□□□ -2.51
SMC4-215ENST00000484799 DNAH11Q96DT5 4516 aa-0.62□□□□□ -2.51
SMC4-215ENST00000484799 ABCC6O95255 1503 aa-0.63□□□□□ -2.51
SMC4-215ENST00000484799 SACSQ9NZJ4 4579 aa-0.63□□□□□ -2.51
SMC4-215ENST00000484799 TOGARAM1Q9Y4F4 1720 aa-0.63□□□□□ -2.51
SMC4-215ENST00000484799 ACACBO00763 2458 aa-0.63□□□□□ -2.51
SMC4-215ENST00000484799 CCDC168Q8NDH2 2452 aa-0.63□□□□□ -2.51
SMC4-215ENST00000484799 DNMBPQ6XZF7 1577 aa-0.63□□□□□ -2.51
SMC4-215ENST00000484799 RIF1Q5UIP0 2472 aaKnown RBP-0.63□□□□□ -2.51
SMC4-215ENST00000484799 RYR1P21817 5038 aa-0.64□□□□□ -2.51
SMC4-215ENST00000484799 RPS27P42677 84 aaKnown RBP-0.64□□□□□ -2.51
SMC4-215ENST00000484799 RPS27LQ71UM5 84 aaKnown RBP-0.64□□□□□ -2.51
SMC4-215ENST00000484799 HERC2O95714 4834 aa-0.65□□□□□ -2.51
SMC4-215ENST00000484799 MUC17Q685J3 4493 aa-0.66□□□□□ -2.51
SMC4-215ENST00000484799 DNAH1Q9P2D7 4330 aa-0.66□□□□□ -2.51
SMC4-215ENST00000484799 H3BUA1 57 aa-0.66□□□□□ -2.52
SMC4-215ENST00000484799 KRTAP20-2Q3LI61 65 aa-0.66□□□□□ -2.52
SMC4-215ENST00000484799 C6orf48Q9UBA6 75 aa-0.66□□□□□ -2.52
SMC4-215ENST00000484799 RANBP2P49792 3224 aaKnown RBP-0.66□□□□□ -2.52
SMC4-215ENST00000484799 MADDQ8WXG6 1647 aa-0.67□□□□□ -2.52
SMC4-215ENST00000484799 HYDINQ4G0P3 5121 aa-0.68□□□□□ -2.52
SMC4-215ENST00000484799 KIAA1109Q2LD37 5005 aa-0.69□□□□□ -2.52
SMC4-215ENST00000484799 DEFB110Q30KQ9 67 aa-0.69□□□□□ -2.52
SMC4-215ENST00000484799 CLASP1Q7Z460 1538 aa-0.69□□□□□ -2.52
SMC4-215ENST00000484799 K7EMI3 77 aa-0.7□□□□□ -2.52
SMC4-215ENST00000484799 FRYQ5TBA9 3013 aa-0.7□□□□□ -2.52
SMC4-215ENST00000484799 TLN2Q9Y4G6 2542 aa-0.71□□□□□ -2.52
SMC4-215ENST00000484799 FCER1GP30273 86 aa-0.71□□□□□ -2.52
SMC4-215ENST00000484799 EFCAB5A4FU69 1503 aa-0.71□□□□□ -2.52
SMC4-215ENST00000484799 TEX15Q9BXT5 2789 aa-0.72□□□□□ -2.52
SMC4-215ENST00000484799 IGLV5-48A0A075B6I7 105 aa-0.72□□□□□ -2.52
SMC4-215ENST00000484799 EPPK1P58107 5090 aaKnown RBP-0.72□□□□□ -2.52
SMC4-215ENST00000484799 TRIOO75962 3097 aa-0.72□□□□□ -2.52
SMC4-215ENST00000484799 USP9XQ93008 2570 aaPredicted RBP-0.72□□□□□ -2.53
SMC4-215ENST00000484799 A0A0C4DFX4 3053 aa-0.73□□□□□ -2.53
SMC4-215ENST00000484799 LINC01549A6NIU2 74 aa-0.73□□□□□ -2.53
SMC4-215ENST00000484799 MT4P47944 62 aa-0.73□□□□□ -2.53
SMC4-215ENST00000484799 NOP10Q9NPE3 64 aaKnown RBP-0.73□□□□□ -2.53
SMC4-215ENST00000484799 ITPR1Q14643 2758 aa-0.73□□□□□ -2.53
SMC4-215ENST00000484799 DNAH2Q9P225 4427 aa-0.73□□□□□ -2.53
SMC4-215ENST00000484799 MMP24-AS1A0A0U1RRL7 71 aa-0.74□□□□□ -2.53
SMC4-215ENST00000484799 NCBP2-AS2Q69YL0 99 aa-0.74□□□□□ -2.53
SMC4-215ENST00000484799 RNF213Q63HN8 5207 aa-0.75□□□□□ -2.53
SMC4-215ENST00000484799 TIAM1Q13009 1591 aa-0.76□□□□□ -2.53
SMC4-215ENST00000484799 LY75O60449 1722 aa-0.76□□□□□ -2.53
SMC4-215ENST00000484799 DNAH8Q96JB1 4490 aa-0.77□□□□□ -2.53
SMC4-215ENST00000484799 CDC42BPAQ5VT25 1732 aa-0.77□□□□□ -2.53
SMC4-215ENST00000484799 CROCC2H7BZ55 1655 aa-0.78□□□□□ -2.53
SMC4-215ENST00000484799 ABCA6Q8N139 1617 aa-0.78□□□□□ -2.53
SMC4-215ENST00000484799 SERF2P84101 59 aa-0.78□□□□□ -2.53
SMC4-215ENST00000484799 RELNP78509 3460 aa-0.78□□□□□ -2.53
SMC4-215ENST00000484799 COL12A1Q99715 3063 aa-0.78□□□□□ -2.53
SMC4-215ENST00000484799 CCDC180Q9P1Z9 1646 aa-0.78□□□□□ -2.54
SMC4-215ENST00000484799 TNP1P09430 55 aa-0.79□□□□□ -2.54
SMC4-215ENST00000484799 SFTA3P0C7M3 94 aa-0.79□□□□□ -2.54
SMC4-215ENST00000484799 SPENQ96T58 3664 aaKnown RBP-0.79□□□□□ -2.54
SMC4-215ENST00000484799 A0A087WWC5 75 aa-0.81□□□□□ -2.54
SMC4-215ENST00000484799 C5orf42Q9H799 3197 aa-0.81□□□□□ -2.54
SMC4-215ENST00000484799 NMES1Q9C002 83 aa-0.83□□□□□ -2.54
SMC4-215ENST00000484799 RYR2Q92736 4967 aa-0.84□□□□□ -2.54
SMC4-215ENST00000484799 M0R1W7 72 aa-0.84□□□□□ -2.54
SMC4-215ENST00000484799 GLI2P10070 1586 aa-0.84□□□□□ -2.54
SMC4-215ENST00000484799 MT1HP80294 61 aa-0.85□□□□□ -2.55
SMC4-215ENST00000484799 KRTAP19-5Q3LI72 72 aa-0.85□□□□□ -2.55
SMC4-215ENST00000484799 TMEM167BQ9NRX6 74 aa-0.85□□□□□ -2.55
SMC4-215ENST00000484799 SPTBN5Q9NRC6 3674 aaKnown RBP-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms