RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
PDLIM4-207ENST00000484620 IGHV6-1A0A0B4J1U7 121 aa10.45□□□□□ -0.74
PDLIM4-207ENST00000484620 LPAP08519 4548 aa10.43□□□□□ -0.74
PDLIM4-207ENST00000484620 C8orf87E5RJ46 101 aa10.42□□□□□ -0.74
PDLIM4-207ENST00000484620 DSCR10P59022 87 aa10.42□□□□□ -0.74
PDLIM4-207ENST00000484620 LINC00313P59037 77 aa10.42□□□□□ -0.74
PDLIM4-207ENST00000484620 XP32Q5T750 250 aa10.41□□□□□ -0.74
PDLIM4-207ENST00000484620 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
PDLIM4-207ENST00000484620 PRR15Q8IV56 129 aa10.39□□□□□ -0.75
PDLIM4-207ENST00000484620 LRP2P98164 4655 aa10.38□□□□□ -0.75
PDLIM4-207ENST00000484620 CXCL6P80162 114 aa10.37□□□□□ -0.75
PDLIM4-207ENST00000484620 K7EQZ3 153 aa10.36□□□□□ -0.75
PDLIM4-207ENST00000484620 K7ERU9 68 aa10.35□□□□□ -0.75
PDLIM4-207ENST00000484620 NOTCH2NLQ7Z3S9 236 aa10.34□□□□□ -0.75
PDLIM4-207ENST00000484620 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
PDLIM4-207ENST00000484620 ATP5EP2Q5VTU8 51 aa10.33□□□□□ -0.76
PDLIM4-207ENST00000484620 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
PDLIM4-207ENST00000484620 Q8N9L7 120 aa10.31□□□□□ -0.76
PDLIM4-207ENST00000484620 KRTAP16-1A8MUX0 517 aa10.29□□□□□ -0.76
PDLIM4-207ENST00000484620 RPL37P61927 97 aaKnown RBP10.29□□□□□ -0.76
PDLIM4-207ENST00000484620 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
PDLIM4-207ENST00000484620 Q75L30 129 aa10.28□□□□□ -0.76
PDLIM4-207ENST00000484620 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
PDLIM4-207ENST00000484620 C20orf166-AS1Q96NR2 134 aa10.27□□□□□ -0.77
PDLIM4-207ENST00000484620 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
PDLIM4-207ENST00000484620 A8MUU9 505 aa10.25□□□□□ -0.77
PDLIM4-207ENST00000484620 hDV103S1A0JD37 113 aa10.24□□□□□ -0.77
PDLIM4-207ENST00000484620 TMEM254Q8TBM7 123 aa10.24□□□□□ -0.77
PDLIM4-207ENST00000484620 CASC2Q6XLA1 102 aa10.21□□□□□ -0.77
PDLIM4-207ENST00000484620 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.77
PDLIM4-207ENST00000484620 HCG22E2RYF7 251 aa10.2□□□□□ -0.78
PDLIM4-207ENST00000484620 ATP11AUNQ6ZP68 121 aa10.2□□□□□ -0.78
PDLIM4-207ENST00000484620 WFDC13Q8IUB5 93 aa10.2□□□□□ -0.78
PDLIM4-207ENST00000484620 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
PDLIM4-207ENST00000484620 HIST1H4AP62805 103 aaKnown RBP10.18□□□□□ -0.78
PDLIM4-207ENST00000484620 PCOTHQ58A44 107 aa10.18□□□□□ -0.78
PDLIM4-207ENST00000484620 Q8N9P0 234 aaPredicted RBP10.18□□□□□ -0.78
PDLIM4-207ENST00000484620 NDUFS5O43920 106 aa10.13□□□□□ -0.79
PDLIM4-207ENST00000484620 ZCCHC13Q8WW36 166 aaKnown RBP10.07□□□□□ -0.8
PDLIM4-207ENST00000484620 A0A087WVE0 104 aa10.06□□□□□ -0.8
PDLIM4-207ENST00000484620 RNF213Q63HN8 5207 aa10.03□□□□□ -0.8
PDLIM4-207ENST00000484620 MT-ATP8P03928 68 aa10.03□□□□□ -0.8
PDLIM4-207ENST00000484620 IMUPQ9GZP8 106 aa10.03□□□□□ -0.8
PDLIM4-207ENST00000484620 TP53AIP1Q9HCN2 124 aa10□□□□□ -0.81
PDLIM4-207ENST00000484620 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
PDLIM4-207ENST00000484620 Q5W150 140 aa9.91□□□□□ -0.82
PDLIM4-207ENST00000484620 SCGB1A1P11684 91 aa9.88□□□□□ -0.83
PDLIM4-207ENST00000484620 UQCRQO14949 82 aa9.86□□□□□ -0.83
PDLIM4-207ENST00000484620 SPINK7P58062 85 aa9.86□□□□□ -0.83
PDLIM4-207ENST00000484620 MUC2Q02817 5179 aa9.85□□□□□ -0.83
PDLIM4-207ENST00000484620 A0A0U1RQV1 116 aa9.84□□□□□ -0.83
PDLIM4-207ENST00000484620 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
PDLIM4-207ENST00000484620 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
PDLIM4-207ENST00000484620 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
PDLIM4-207ENST00000484620 IGKV2D-30A0A075B6S6 120 aa9.81□□□□□ -0.84
PDLIM4-207ENST00000484620 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
PDLIM4-207ENST00000484620 C7orf65Q6ZTY9 151 aa9.81□□□□□ -0.84
PDLIM4-207ENST00000484620 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
PDLIM4-207ENST00000484620 ATOX1O00244 68 aa9.77□□□□□ -0.85
PDLIM4-207ENST00000484620 H0Y9P7 68 aa9.76□□□□□ -0.85
PDLIM4-207ENST00000484620 SMIM20Q8N5G0 67 aa9.76□□□□□ -0.85
PDLIM4-207ENST00000484620 HRES1P13985 223 aa9.75□□□□□ -0.85
PDLIM4-207ENST00000484620 MP68P56378 58 aa9.73□□□□□ -0.85
PDLIM4-207ENST00000484620 RBM12B-AS1Q9P1G2 102 aa9.73□□□□□ -0.85
PDLIM4-207ENST00000484620 LOC101927531A0A1B0GV80 90 aa9.72□□□□□ -0.85
PDLIM4-207ENST00000484620 C5orf47Q569G3 176 aa9.72□□□□□ -0.85
PDLIM4-207ENST00000484620 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.86
PDLIM4-207ENST00000484620 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
PDLIM4-207ENST00000484620 MPLKIPQ8TAP9 179 aa9.68□□□□□ -0.86
PDLIM4-207ENST00000484620 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
PDLIM4-207ENST00000484620 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
PDLIM4-207ENST00000484620 KRTAP19-2Q3LHN2 52 aa9.66□□□□□ -0.86
PDLIM4-207ENST00000484620 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
PDLIM4-207ENST00000484620 C1orf64Q8NEQ6 169 aa9.65□□□□□ -0.86
PDLIM4-207ENST00000484620 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
PDLIM4-207ENST00000484620 H3BPC8 53 aa9.64□□□□□ -0.87
PDLIM4-207ENST00000484620 FAT4Q6V0I7 4981 aa9.63□□□□□ -0.87
PDLIM4-207ENST00000484620 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
PDLIM4-207ENST00000484620 SERP2Q8N6R1 65 aa9.57□□□□□ -0.88
PDLIM4-207ENST00000484620 C4orf26Q17RF5 130 aa9.56□□□□□ -0.88
PDLIM4-207ENST00000484620 MT1HP80294 61 aa9.48□□□□□ -0.89
PDLIM4-207ENST00000484620 KLKP1Q107X0 134 aa9.48□□□□□ -0.89
PDLIM4-207ENST00000484620 H1FX-AS1Q4G0G2 97 aa9.46□□□□□ -0.9
PDLIM4-207ENST00000484620 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
PDLIM4-207ENST00000484620 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
PDLIM4-207ENST00000484620 COX7CP15954 63 aa9.44□□□□□ -0.9
PDLIM4-207ENST00000484620 C20orf197Q8N268 126 aa9.43□□□□□ -0.9
PDLIM4-207ENST00000484620 ANAPC13Q9BS18 74 aa9.43□□□□□ -0.9
PDLIM4-207ENST00000484620 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
PDLIM4-207ENST00000484620 M0R2T5 61 aa9.41□□□□□ -0.9
PDLIM4-207ENST00000484620 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
PDLIM4-207ENST00000484620 A8MUN3 132 aa9.35□□□□□ -0.91
PDLIM4-207ENST00000484620 S4R3F8 94 aa9.29□□□□□ -0.92
PDLIM4-207ENST00000484620 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
PDLIM4-207ENST00000484620 NDUFC1O43677 76 aa9.24□□□□□ -0.93
PDLIM4-207ENST00000484620 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
PDLIM4-207ENST00000484620 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
PDLIM4-207ENST00000484620 LCA10Q71F78 164 aa9.2□□□□□ -0.94
PDLIM4-207ENST00000484620 CCDC179H3BU77 68 aa9.18□□□□□ -0.94
PDLIM4-207ENST00000484620 ACYP2P14621 99 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms