RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
COL12A1-207ENST00000483888 DMXL2Q8TDJ6 3036 aa5.62□□□□□ -1.51
COL12A1-207ENST00000483888 HTTP42858 3142 aa5.62□□□□□ -1.51
COL12A1-207ENST00000483888 SETXQ7Z333 2677 aaKnown RBP5.6□□□□□ -1.51
COL12A1-207ENST00000483888 ZFHX3Q15911 3703 aa5.6□□□□□ -1.51
COL12A1-207ENST00000483888 KRTAP10-1P60331 282 aa5.59□□□□□ -1.51
COL12A1-207ENST00000483888 BOD1L1Q8NFC6 3051 aa5.58□□□□□ -1.52
COL12A1-207ENST00000483888 SZT2Q5T011 3432 aa5.58□□□□□ -1.52
COL12A1-207ENST00000483888 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
COL12A1-207ENST00000483888 CFAP47Q6ZTR5 3102 aa5.57□□□□□ -1.52
COL12A1-207ENST00000483888 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
COL12A1-207ENST00000483888 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
COL12A1-207ENST00000483888 ATMQ13315 3056 aa5.56□□□□□ -1.52
COL12A1-207ENST00000483888 FLNBO75369 2602 aaKnown RBP5.56□□□□□ -1.52
COL12A1-207ENST00000483888 IGSF10Q6WRI0 2623 aa5.56□□□□□ -1.52
COL12A1-207ENST00000483888 KRTAP13-1Q8IUC0 172 aa5.55□□□□□ -1.52
COL12A1-207ENST00000483888 ZNF292O60281 2723 aa5.55□□□□□ -1.52
COL12A1-207ENST00000483888 WDFY3Q8IZQ1 3526 aa5.52□□□□□ -1.53
COL12A1-207ENST00000483888 DCHS1Q96JQ0 3298 aa5.51□□□□□ -1.53
COL12A1-207ENST00000483888 ADGRG4Q8IZF6 3080 aa5.51□□□□□ -1.53
COL12A1-207ENST00000483888 KRTAP13-2Q52LG2 175 aa5.5□□□□□ -1.53
COL12A1-207ENST00000483888 SPEGQ15772 3267 aa5.5□□□□□ -1.53
COL12A1-207ENST00000483888 Q5VSD8 79 aa5.49□□□□□ -1.53
COL12A1-207ENST00000483888 Q6ZRN7 208 aaPredicted RBP5.48□□□□□ -1.53
COL12A1-207ENST00000483888 TGP01266 2768 aa5.48□□□□□ -1.53
COL12A1-207ENST00000483888 TNRC18O15417 2968 aaPredicted RBP5.47□□□□□ -1.53
COL12A1-207ENST00000483888 HIVEP1P15822 2718 aa5.47□□□□□ -1.53
COL12A1-207ENST00000483888 SRRM2Q9UQ35 2752 aaKnown RBP5.46□□□□□ -1.53
COL12A1-207ENST00000483888 CRYBG3Q68DQ2 2970 aa5.46□□□□□ -1.54
COL12A1-207ENST00000483888 USP34Q70CQ2 3546 aa5.42□□□□□ -1.54
COL12A1-207ENST00000483888 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
COL12A1-207ENST00000483888 CELSR2Q9HCU4 2923 aa5.39□□□□□ -1.55
COL12A1-207ENST00000483888 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
COL12A1-207ENST00000483888 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
COL12A1-207ENST00000483888 ASPMQ8IZT6 3477 aa5.35□□□□□ -1.55
COL12A1-207ENST00000483888 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
COL12A1-207ENST00000483888 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
COL12A1-207ENST00000483888 SPTBN5Q9NRC6 3674 aaKnown RBP5.32□□□□□ -1.56
COL12A1-207ENST00000483888 PDZD2O15018 2839 aa5.32□□□□□ -1.56
COL12A1-207ENST00000483888 NF1P21359 2839 aa5.31□□□□□ -1.56
COL12A1-207ENST00000483888 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
COL12A1-207ENST00000483888 ZFHX4Q86UP3 3567 aa5.3□□□□□ -1.56
COL12A1-207ENST00000483888 DCHS2Q6V1P9 2916 aa5.28□□□□□ -1.56
COL12A1-207ENST00000483888 LAMA5O15230 3695 aa5.28□□□□□ -1.56
COL12A1-207ENST00000483888 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
COL12A1-207ENST00000483888 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
COL12A1-207ENST00000483888 DMDP11532 3685 aa5.23□□□□□ -1.57
COL12A1-207ENST00000483888 FBN2P35556 2912 aa5.23□□□□□ -1.57
COL12A1-207ENST00000483888 NIPBLQ6KC79 2804 aaeCLIP5.23□□□□□ -1.57
COL12A1-207ENST00000483888 INE1O15225 51 aa5.21□□□□□ -1.57
COL12A1-207ENST00000483888 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
COL12A1-207ENST00000483888 TENM3Q9P273 2699 aa5.19□□□□□ -1.58
COL12A1-207ENST00000483888 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
COL12A1-207ENST00000483888 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
COL12A1-207ENST00000483888 RELNP78509 3460 aa5.17□□□□□ -1.58
COL12A1-207ENST00000483888 XP32Q5T750 250 aa5.16□□□□□ -1.58
COL12A1-207ENST00000483888 SMG1Q96Q15 3661 aaKnown RBP5.15□□□□□ -1.58
COL12A1-207ENST00000483888 ZANQ9Y493 2812 aa5.12□□□□□ -1.59
COL12A1-207ENST00000483888 EYSQ5T1H1 3165 aa5.12□□□□□ -1.59
COL12A1-207ENST00000483888 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
COL12A1-207ENST00000483888 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
COL12A1-207ENST00000483888 TENM1Q9UKZ4 2725 aa5.12□□□□□ -1.59
COL12A1-207ENST00000483888 KRTAP1-4P0C5Y4 121 aa5.11□□□□□ -1.59
COL12A1-207ENST00000483888 MXRA5Q9NR99 2828 aa5.11□□□□□ -1.59
COL12A1-207ENST00000483888 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
COL12A1-207ENST00000483888 FLNCQ14315 2725 aa5.08□□□□□ -1.6
COL12A1-207ENST00000483888 SPENQ96T58 3664 aaKnown RBP5.06□□□□□ -1.6
COL12A1-207ENST00000483888 TENM4Q6N022 2769 aa4.99□□□□□ -1.61
COL12A1-207ENST00000483888 CUBNO60494 3623 aa4.96□□□□□ -1.61
COL12A1-207ENST00000483888 SVEP1Q4LDE5 3571 aa4.93□□□□□ -1.62
COL12A1-207ENST00000483888 COL7A1Q02388 2944 aa4.93□□□□□ -1.62
COL12A1-207ENST00000483888 TENM2Q9NT68 2774 aa4.93□□□□□ -1.62
COL12A1-207ENST00000483888 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
COL12A1-207ENST00000483888 PKD1L1Q8TDX9 2849 aa4.93□□□□□ -1.62
COL12A1-207ENST00000483888 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
COL12A1-207ENST00000483888 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.63
COL12A1-207ENST00000483888 NBPF19A0A087WUL8 3843 aa4.88□□□□□ -1.63
COL12A1-207ENST00000483888 MEGF8Q7Z7M0 2845 aa4.85□□□□□ -1.63
COL12A1-207ENST00000483888 VWFP04275 2813 aa4.83□□□□□ -1.64
COL12A1-207ENST00000483888 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
COL12A1-207ENST00000483888 OTOGQ6ZRI0 2925 aa4.79□□□□□ -1.64
COL12A1-207ENST00000483888 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
COL12A1-207ENST00000483888 MUC3AQ02505 3323 aa4.77□□□□□ -1.65
COL12A1-207ENST00000483888 FBN1P35555 2871 aaKnown RBP4.75□□□□□ -1.65
COL12A1-207ENST00000483888 FBN3Q75N90 2809 aa4.72□□□□□ -1.65
COL12A1-207ENST00000483888 CSMD2Q7Z408 3487 aa4.69□□□□□ -1.66
COL12A1-207ENST00000483888 AKAP9Q99996 3911 aa4.68□□□□□ -1.66
COL12A1-207ENST00000483888 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
COL12A1-207ENST00000483888 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
COL12A1-207ENST00000483888 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
COL12A1-207ENST00000483888 TRRAPQ9Y4A5 3859 aa4.55□□□□□ -1.68
COL12A1-207ENST00000483888 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
COL12A1-207ENST00000483888 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
COL12A1-207ENST00000483888 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
COL12A1-207ENST00000483888 BSNQ9UPA5 3926 aa4.46□□□□□ -1.7
COL12A1-207ENST00000483888 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
COL12A1-207ENST00000483888 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
COL12A1-207ENST00000483888 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
COL12A1-207ENST00000483888 FRAS1Q86XX4 4008 aa4.21□□□□□ -1.74
COL12A1-207ENST00000483888 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms