RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ZFYVE26Q68DK2 2539 aa0.92□□□□□ -2.26
R3HDM1-216ENST00000483065 A0A0C4DFX4 3053 aa0.92□□□□□ -2.26
R3HDM1-216ENST00000483065 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
R3HDM1-216ENST00000483065 PKD1L1Q8TDX9 2849 aa0.89□□□□□ -2.27
R3HDM1-216ENST00000483065 DEFB108AA8MXU0 73 aa0.89□□□□□ -2.27
R3HDM1-216ENST00000483065 EP400Q96L91 3159 aa0.88□□□□□ -2.27
R3HDM1-216ENST00000483065 FAM186AA6NE01 2351 aa0.88□□□□□ -2.27
R3HDM1-216ENST00000483065 TNRC18O15417 2968 aaPredicted RBP0.87□□□□□ -2.27
R3HDM1-216ENST00000483065 DEFB108BQ8NET1 73 aa0.87□□□□□ -2.27
R3HDM1-216ENST00000483065 CELSR1Q9NYQ6 3014 aa0.86□□□□□ -2.27
R3HDM1-216ENST00000483065 SPART-AS1P0CW21 52 aa0.86□□□□□ -2.27
R3HDM1-216ENST00000483065 RPL39P5Q59GN2 51 aa0.86□□□□□ -2.27
R3HDM1-216ENST00000483065 DEFB124Q8NES8 71 aa0.86□□□□□ -2.27
R3HDM1-216ENST00000483065 HIVEP3Q5T1R4 2406 aa0.85□□□□□ -2.27
R3HDM1-216ENST00000483065 TMEM167AQ8TBQ9 72 aa0.85□□□□□ -2.27
R3HDM1-216ENST00000483065 LEAP2Q969E1 77 aa0.85□□□□□ -2.27
R3HDM1-216ENST00000483065 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.27
R3HDM1-216ENST00000483065 DNAH12Q6ZR08 3092 aa0.84□□□□□ -2.27
R3HDM1-216ENST00000483065 PRCDQ00LT1 54 aa0.84□□□□□ -2.27
R3HDM1-216ENST00000483065 APC2O95996 2303 aa0.84□□□□□ -2.28
R3HDM1-216ENST00000483065 NCOR1O75376 2440 aa0.84□□□□□ -2.28
R3HDM1-216ENST00000483065 SRCAPQ6ZRS2 3230 aa0.83□□□□□ -2.28
R3HDM1-216ENST00000483065 CEP350Q5VT06 3117 aa0.83□□□□□ -2.28
R3HDM1-216ENST00000483065 SETXQ7Z333 2677 aaKnown RBP0.83□□□□□ -2.28
R3HDM1-216ENST00000483065 GOLGB1Q14789 3259 aaKnown RBP0.83□□□□□ -2.28
R3HDM1-216ENST00000483065 ACACAQ13085 2346 aa0.82□□□□□ -2.28
R3HDM1-216ENST00000483065 K7EIM0 57 aa0.82□□□□□ -2.28
R3HDM1-216ENST00000483065 APELAP0DMC3 54 aa0.82□□□□□ -2.28
R3HDM1-216ENST00000483065 MAP1BP46821 2468 aaKnown RBP0.82□□□□□ -2.28
R3HDM1-216ENST00000483065 RIF1Q5UIP0 2472 aaKnown RBP0.81□□□□□ -2.28
R3HDM1-216ENST00000483065 SRRM2Q9UQ35 2752 aaKnown RBP0.81□□□□□ -2.28
R3HDM1-216ENST00000483065 PCNTO95613 3336 aa0.81□□□□□ -2.28
R3HDM1-216ENST00000483065 UTRNP46939 3433 aa0.81□□□□□ -2.28
R3HDM1-216ENST00000483065 CEP250Q9BV73 2442 aa0.81□□□□□ -2.28
R3HDM1-216ENST00000483065 UBR5O95071 2799 aaPredicted RBP0.81□□□□□ -2.28
R3HDM1-216ENST00000483065 ACANP16112 2415 aa0.8□□□□□ -2.28
R3HDM1-216ENST00000483065 C5orf42Q9H799 3197 aa0.8□□□□□ -2.28
R3HDM1-216ENST00000483065 CENPFP49454 3210 aa0.8□□□□□ -2.28
R3HDM1-216ENST00000483065 SPTAN1Q13813 2472 aaKnown RBP0.79□□□□□ -2.28
R3HDM1-216ENST00000483065 SPRR2AP35326 72 aa0.79□□□□□ -2.28
R3HDM1-216ENST00000483065 RHPN1-AS1Q9BWJ2 59 aa0.79□□□□□ -2.28
R3HDM1-216ENST00000483065 DNAH14Q0VDD8 3507 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 HUWE1Q7Z6Z7 4374 aaKnown RBP0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 H3BUX3 64 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 HTN1P15515 57 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 DEFB1P60022 68 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 DEFB104AQ8WTQ1 72 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 CHD7Q9P2D1 2997 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 WNK1Q9H4A3 2382 aa0.78□□□□□ -2.28
R3HDM1-216ENST00000483065 BSNQ9UPA5 3926 aa0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 SPG11Q96JI7 2443 aa0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 NF1P21359 2839 aa0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 HTTP42858 3142 aa0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 MKI67P46013 3256 aaKnown RBP0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 BRCA2P51587 3418 aa0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 FAT2Q9NYQ8 4349 aa0.77□□□□□ -2.29
R3HDM1-216ENST00000483065 DEFB136Q30KP8 78 aa0.75□□□□□ -2.29
R3HDM1-216ENST00000483065 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
R3HDM1-216ENST00000483065 NCOR2Q9Y618 2525 aa0.74□□□□□ -2.29
R3HDM1-216ENST00000483065 CELSR3Q9NYQ7 3312 aa0.74□□□□□ -2.29
R3HDM1-216ENST00000483065 SZT2Q5T011 3432 aa0.74□□□□□ -2.29
R3HDM1-216ENST00000483065 SPTBN5Q9NRC6 3674 aaKnown RBP0.74□□□□□ -2.29
R3HDM1-216ENST00000483065 TRIOO75962 3097 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 LAMA3Q16787 3333 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 CACNA1AO00555 2505 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 MT1AP04731 61 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 CFAP54Q96N23 3096 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 UNC80Q8N2C7 3258 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 CDH23Q9H251 3354 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 FLNCQ14315 2725 aa0.73□□□□□ -2.29
R3HDM1-216ENST00000483065 SPTBN4Q9H254 2564 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 LAMA2P24043 3122 aaKnown RBP0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 XIRP2A4UGR9 3374 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 FRYLO94915 3013 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 DEFB4AO15263 64 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 RANBP2P49792 3224 aaKnown RBP0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 PRUNE2Q8WUY3 3088 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 MTORP42345 2549 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 ANKHD1Q8IWZ3 2542 aaKnown RBP0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 FRYQ5TBA9 3013 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 SPEGQ15772 3267 aa0.72□□□□□ -2.29
R3HDM1-216ENST00000483065 WDR87Q6ZQQ6 2873 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 LAMA1P25391 3075 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 USP9XQ93008 2570 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 TLN1Q9Y490 2541 aaKnown RBP0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 A0A096LPF7 62 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 HTN3P15516 51 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 MGAQ8IWI9 3026 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 SETD2Q9BYW2 2564 aaPredicted RBP0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 WDFY4Q6ZS81 3184 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 VPS13AQ96RL7 3174 aa0.71□□□□□ -2.3
R3HDM1-216ENST00000483065 CEP295Q9C0D2 2601 aa0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 USP9YO00507 2555 aaPredicted RBP0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 MYCBP2O75592 4640 aa0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 COL6A3P12111 3177 aa0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 GCN1Q92616 2671 aaKnown RBP0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 NSD1Q96L73 2696 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms