RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
SNRNP200-205ENST00000480835 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
SNRNP200-205ENST00000480835 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
SNRNP200-205ENST00000480835 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.07
SNRNP200-205ENST00000480835 HCG22E2RYF7 251 aa8.34□□□□□ -1.07
SNRNP200-205ENST00000480835 TNXBP22105 4242 aa8.34□□□□□ -1.07
SNRNP200-205ENST00000480835 C8orf17Q9NRJ1 99 aa8.33□□□□□ -1.08
SNRNP200-205ENST00000480835 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
SNRNP200-205ENST00000480835 ATOX1O00244 68 aa8.3□□□□□ -1.08
SNRNP200-205ENST00000480835 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
SNRNP200-205ENST00000480835 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
SNRNP200-205ENST00000480835 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
SNRNP200-205ENST00000480835 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
SNRNP200-205ENST00000480835 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
SNRNP200-205ENST00000480835 LINC00313P59037 77 aa8.28□□□□□ -1.08
SNRNP200-205ENST00000480835 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
SNRNP200-205ENST00000480835 J3QL48 77 aa8.27□□□□□ -1.09
SNRNP200-205ENST00000480835 TMEM254Q8TBM7 123 aa8.27□□□□□ -1.09
SNRNP200-205ENST00000480835 SMIM20Q8N5G0 67 aa8.26□□□□□ -1.09
SNRNP200-205ENST00000480835 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
SNRNP200-205ENST00000480835 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
SNRNP200-205ENST00000480835 ABCA13Q86UQ4 5058 aa8.22□□□□□ -1.09
SNRNP200-205ENST00000480835 MYCBP2O75592 4640 aa8.21□□□□□ -1.09
SNRNP200-205ENST00000480835 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
SNRNP200-205ENST00000480835 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
SNRNP200-205ENST00000480835 IGLV7-46A0A075B6I9 117 aa8.18□□□□□ -1.1
SNRNP200-205ENST00000480835 KRTAP16-1A8MUX0 517 aa8.18□□□□□ -1.1
SNRNP200-205ENST00000480835 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
SNRNP200-205ENST00000480835 SERP2Q8N6R1 65 aa8.17□□□□□ -1.1
SNRNP200-205ENST00000480835 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
SNRNP200-205ENST00000480835 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
SNRNP200-205ENST00000480835 UQCRQO14949 82 aa8.14□□□□□ -1.11
SNRNP200-205ENST00000480835 NDUFS5O43920 106 aa8.14□□□□□ -1.11
SNRNP200-205ENST00000480835 PRR4Q16378 134 aa8.14□□□□□ -1.11
SNRNP200-205ENST00000480835 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
SNRNP200-205ENST00000480835 COX7CP15954 63 aa8.12□□□□□ -1.11
SNRNP200-205ENST00000480835 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
SNRNP200-205ENST00000480835 PCP4P48539 62 aa8.09□□□□□ -1.11
SNRNP200-205ENST00000480835 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
SNRNP200-205ENST00000480835 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
SNRNP200-205ENST00000480835 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
SNRNP200-205ENST00000480835 A8MUU9 505 aa8.07□□□□□ -1.12
SNRNP200-205ENST00000480835 TRAV22A0A0B4J277 110 aa8.05□□□□□ -1.12
SNRNP200-205ENST00000480835 Q75L30 129 aa8.05□□□□□ -1.12
SNRNP200-205ENST00000480835 MP68P56378 58 aa8.04□□□□□ -1.12
SNRNP200-205ENST00000480835 H3BPC8 53 aa8.03□□□□□ -1.12
SNRNP200-205ENST00000480835 H0Y9P7 68 aa8.02□□□□□ -1.13
SNRNP200-205ENST00000480835 XP32Q5T750 250 aa8.01□□□□□ -1.13
SNRNP200-205ENST00000480835 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
SNRNP200-205ENST00000480835 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
SNRNP200-205ENST00000480835 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
SNRNP200-205ENST00000480835 A0A0U1RQV1 116 aa7.98□□□□□ -1.13
SNRNP200-205ENST00000480835 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
SNRNP200-205ENST00000480835 Q5W150 140 aa7.98□□□□□ -1.13
SNRNP200-205ENST00000480835 KLKP1Q107X0 134 aa7.96□□□□□ -1.14
SNRNP200-205ENST00000480835 LINC00208Q96KT6 92 aa7.96□□□□□ -1.14
SNRNP200-205ENST00000480835 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.14
SNRNP200-205ENST00000480835 C1orf64Q8NEQ6 169 aa7.94□□□□□ -1.14
SNRNP200-205ENST00000480835 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
SNRNP200-205ENST00000480835 ATP11AUNQ6ZP68 121 aa7.93□□□□□ -1.14
SNRNP200-205ENST00000480835 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
SNRNP200-205ENST00000480835 NDUFC1O43677 76 aa7.9□□□□□ -1.14
SNRNP200-205ENST00000480835 IGKV2-30P06310 120 aa7.89□□□□□ -1.15
SNRNP200-205ENST00000480835 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
SNRNP200-205ENST00000480835 CYP4F30PQ9H0H9 118 aa7.85□□□□□ -1.15
SNRNP200-205ENST00000480835 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
SNRNP200-205ENST00000480835 CYSTM1Q9H1C7 97 aa7.83□□□□□ -1.16
SNRNP200-205ENST00000480835 H7BZZ5 65 aa7.82□□□□□ -1.16
SNRNP200-205ENST00000480835 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
SNRNP200-205ENST00000480835 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
SNRNP200-205ENST00000480835 SPINK7P58062 85 aa7.78□□□□□ -1.16
SNRNP200-205ENST00000480835 TMEM258P61165 79 aa7.76□□□□□ -1.17
SNRNP200-205ENST00000480835 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
SNRNP200-205ENST00000480835 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
SNRNP200-205ENST00000480835 LPAP08519 4548 aa7.72□□□□□ -1.17
SNRNP200-205ENST00000480835 HRES1P13985 223 aa7.71□□□□□ -1.18
SNRNP200-205ENST00000480835 FAM236DA0A1B0GTK5 79 aa7.69□□□□□ -1.18
SNRNP200-205ENST00000480835 FAM236CP0DP71 79 aa7.69□□□□□ -1.18
SNRNP200-205ENST00000480835 LRP2P98164 4655 aa7.69□□□□□ -1.18
SNRNP200-205ENST00000480835 HERC1Q15751 4861 aa7.68□□□□□ -1.18
SNRNP200-205ENST00000480835 HMCN2Q8NDA2 5059 aa7.67□□□□□ -1.18
SNRNP200-205ENST00000480835 MUC17Q685J3 4493 aa7.63□□□□□ -1.19
SNRNP200-205ENST00000480835 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
SNRNP200-205ENST00000480835 A8MUN3 132 aa7.6□□□□□ -1.19
SNRNP200-205ENST00000480835 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
SNRNP200-205ENST00000480835 COX6B2Q6YFQ2 88 aa7.59□□□□□ -1.19
SNRNP200-205ENST00000480835 ACYP2P14621 99 aa7.56□□□□□ -1.2
SNRNP200-205ENST00000480835 MPLKIPQ8TAP9 179 aa7.56□□□□□ -1.2
SNRNP200-205ENST00000480835 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
SNRNP200-205ENST00000480835 KRTAP4-1Q9BYQ7 146 aa7.55□□□□□ -1.2
SNRNP200-205ENST00000480835 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
SNRNP200-205ENST00000480835 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
SNRNP200-205ENST00000480835 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
SNRNP200-205ENST00000480835 COA5Q86WW8 74 aa7.47□□□□□ -1.21
SNRNP200-205ENST00000480835 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
SNRNP200-205ENST00000480835 CHKB-CPT1BH3BT56 60 aa7.42□□□□□ -1.22
SNRNP200-205ENST00000480835 KRTAP19-2Q3LHN2 52 aa7.36□□□□□ -1.23
SNRNP200-205ENST00000480835 SPTSSBQ8NFR3 76 aa7.36□□□□□ -1.23
SNRNP200-205ENST00000480835 S4R3F8 94 aa7.36□□□□□ -1.23
SNRNP200-205ENST00000480835 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms