RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
SCAMP3-207ENST00000480219 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
SCAMP3-207ENST00000480219 NDUFB1O75438 58 aa9.33□□□□□ -0.92
SCAMP3-207ENST00000480219 K7EQZ3 153 aa9.32□□□□□ -0.92
SCAMP3-207ENST00000480219 PRR4Q16378 134 aa9.31□□□□□ -0.92
SCAMP3-207ENST00000480219 C8orf87E5RJ46 101 aa9.3□□□□□ -0.92
SCAMP3-207ENST00000480219 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
SCAMP3-207ENST00000480219 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
SCAMP3-207ENST00000480219 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
SCAMP3-207ENST00000480219 Q8N9L7 120 aa9.28□□□□□ -0.92
SCAMP3-207ENST00000480219 IGHV6-1A0A0B4J1U7 121 aa9.26□□□□□ -0.93
SCAMP3-207ENST00000480219 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
SCAMP3-207ENST00000480219 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
SCAMP3-207ENST00000480219 MMP24-AS1A0A0U1RRL7 71 aa9.24□□□□□ -0.93
SCAMP3-207ENST00000480219 LINC00313P59037 77 aa9.24□□□□□ -0.93
SCAMP3-207ENST00000480219 NOTCH2NLQ7Z3S9 236 aa9.24□□□□□ -0.93
SCAMP3-207ENST00000480219 MT-ATP8P03928 68 aa9.23□□□□□ -0.93
SCAMP3-207ENST00000480219 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
SCAMP3-207ENST00000480219 LPAP08519 4548 aa9.19□□□□□ -0.94
SCAMP3-207ENST00000480219 C9orf92A6NGG3 77 aa9.18□□□□□ -0.94
SCAMP3-207ENST00000480219 HCG22E2RYF7 251 aa9.18□□□□□ -0.94
SCAMP3-207ENST00000480219 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
SCAMP3-207ENST00000480219 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
SCAMP3-207ENST00000480219 hDV103S1A0JD37 113 aa9.16□□□□□ -0.94
SCAMP3-207ENST00000480219 XP32Q5T750 250 aa9.15□□□□□ -0.94
SCAMP3-207ENST00000480219 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
SCAMP3-207ENST00000480219 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
SCAMP3-207ENST00000480219 A0A087WVE0 104 aa9.14□□□□□ -0.95
SCAMP3-207ENST00000480219 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
SCAMP3-207ENST00000480219 A8MUU9 505 aa9.13□□□□□ -0.95
SCAMP3-207ENST00000480219 MRPL34Q9BQ48 92 aaKnown RBP9.13□□□□□ -0.95
SCAMP3-207ENST00000480219 LRP2P98164 4655 aa9.12□□□□□ -0.95
SCAMP3-207ENST00000480219 Q75L30 129 aa9.11□□□□□ -0.95
SCAMP3-207ENST00000480219 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
SCAMP3-207ENST00000480219 RPL37P61927 97 aaKnown RBP9.07□□□□□ -0.96
SCAMP3-207ENST00000480219 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
SCAMP3-207ENST00000480219 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
SCAMP3-207ENST00000480219 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
SCAMP3-207ENST00000480219 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
SCAMP3-207ENST00000480219 OCR1Q9BZK8 76 aa8.97□□□□□ -0.97
SCAMP3-207ENST00000480219 NDUFS5O43920 106 aa8.95□□□□□ -0.98
SCAMP3-207ENST00000480219 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
SCAMP3-207ENST00000480219 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
SCAMP3-207ENST00000480219 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
SCAMP3-207ENST00000480219 ATOX1O00244 68 aa8.92□□□□□ -0.98
SCAMP3-207ENST00000480219 UQCRQO14949 82 aa8.91□□□□□ -0.98
SCAMP3-207ENST00000480219 SCGB1A1P11684 91 aa8.91□□□□□ -0.98
SCAMP3-207ENST00000480219 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
SCAMP3-207ENST00000480219 Q5W150 140 aa8.9□□□□□ -0.98
SCAMP3-207ENST00000480219 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
SCAMP3-207ENST00000480219 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
SCAMP3-207ENST00000480219 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
SCAMP3-207ENST00000480219 C5orf47Q569G3 176 aa8.82□□□□□ -1
SCAMP3-207ENST00000480219 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
SCAMP3-207ENST00000480219 H0Y9P7 68 aa8.79□□□□□ -1
SCAMP3-207ENST00000480219 SERP2Q8N6R1 65 aa8.79□□□□□ -1
SCAMP3-207ENST00000480219 H3BPC8 53 aa8.77□□□□□ -1.01
SCAMP3-207ENST00000480219 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
SCAMP3-207ENST00000480219 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
SCAMP3-207ENST00000480219 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
SCAMP3-207ENST00000480219 MP68P56378 58 aa8.74□□□□□ -1.01
SCAMP3-207ENST00000480219 SPINK7P58062 85 aa8.73□□□□□ -1.01
SCAMP3-207ENST00000480219 C7orf65Q6ZTY9 151 aa8.73□□□□□ -1.01
SCAMP3-207ENST00000480219 RNF213Q63HN8 5207 aa8.73□□□□□ -1.01
SCAMP3-207ENST00000480219 COX7CP15954 63 aa8.7□□□□□ -1.02
SCAMP3-207ENST00000480219 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
SCAMP3-207ENST00000480219 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
SCAMP3-207ENST00000480219 CYP4F30PQ9H0H9 118 aa8.69□□□□□ -1.02
SCAMP3-207ENST00000480219 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
SCAMP3-207ENST00000480219 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
SCAMP3-207ENST00000480219 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
SCAMP3-207ENST00000480219 MUC2Q02817 5179 aa8.67□□□□□ -1.02
SCAMP3-207ENST00000480219 HRES1P13985 223 aa8.66□□□□□ -1.02
SCAMP3-207ENST00000480219 MPLKIPQ8TAP9 179 aa8.66□□□□□ -1.02
SCAMP3-207ENST00000480219 KLKP1Q107X0 134 aa8.63□□□□□ -1.03
SCAMP3-207ENST00000480219 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
SCAMP3-207ENST00000480219 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
SCAMP3-207ENST00000480219 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
SCAMP3-207ENST00000480219 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
SCAMP3-207ENST00000480219 RBM12B-AS1Q9P1G2 102 aa8.51□□□□□ -1.05
SCAMP3-207ENST00000480219 COX6B2Q6YFQ2 88 aa8.5□□□□□ -1.05
SCAMP3-207ENST00000480219 NDUFC1O43677 76 aa8.49□□□□□ -1.05
SCAMP3-207ENST00000480219 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
SCAMP3-207ENST00000480219 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
SCAMP3-207ENST00000480219 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
SCAMP3-207ENST00000480219 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
SCAMP3-207ENST00000480219 H7BZZ5 65 aa8.44□□□□□ -1.06
SCAMP3-207ENST00000480219 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
SCAMP3-207ENST00000480219 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
SCAMP3-207ENST00000480219 A8MUN3 132 aa8.41□□□□□ -1.06
SCAMP3-207ENST00000480219 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.06
SCAMP3-207ENST00000480219 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
SCAMP3-207ENST00000480219 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
SCAMP3-207ENST00000480219 PCP4P48539 62 aa8.38□□□□□ -1.07
SCAMP3-207ENST00000480219 DMAC1Q96GE9 116 aa8.38□□□□□ -1.07
SCAMP3-207ENST00000480219 H1FX-AS1Q4G0G2 97 aa8.37□□□□□ -1.07
SCAMP3-207ENST00000480219 TMEM258P61165 79 aa8.26□□□□□ -1.09
SCAMP3-207ENST00000480219 MT1HP80294 61 aa8.26□□□□□ -1.09
SCAMP3-207ENST00000480219 ACYP2P14621 99 aa8.25□□□□□ -1.09
SCAMP3-207ENST00000480219 ATP5EP56381 51 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms