RNA–Protein interactions for RNA: ENST00000479351.5

CNTNAP3B-206, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 2,426 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-206ENST00000479351 VPS13BQ7Z7G8 4022 aa12.49□□□□□ -0.41
CNTNAP3B-206ENST00000479351 NDUFS5O43920 106 aa12.47□□□□□ -0.41
CNTNAP3B-206ENST00000479351 CDK2AP2O75956 126 aa12.46□□□□□ -0.41
CNTNAP3B-206ENST00000479351 PKHD1P08F94 4074 aa12.44□□□□□ -0.42
CNTNAP3B-206ENST00000479351 Q6ZSA8 131 aa12.43□□□□□ -0.42
CNTNAP3B-206ENST00000479351 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
CNTNAP3B-206ENST00000479351 KRTAP13-2Q52LG2 175 aa12.41□□□□□ -0.42
CNTNAP3B-206ENST00000479351 PCOTHQ58A44 107 aa12.4□□□□□ -0.42
CNTNAP3B-206ENST00000479351 H3BPC8 53 aa12.39□□□□□ -0.43
CNTNAP3B-206ENST00000479351 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
CNTNAP3B-206ENST00000479351 LINC00336Q6ZUF6 198 aa12.38□□□□□ -0.43
CNTNAP3B-206ENST00000479351 MRPL34Q9BQ48 92 aaKnown RBP12.38□□□□□ -0.43
CNTNAP3B-206ENST00000479351 SSBP3-AS1Q7Z2R9 100 aa12.33□□□□□ -0.44
CNTNAP3B-206ENST00000479351 TP53AIP1Q9HCN2 124 aa12.33□□□□□ -0.44
CNTNAP3B-206ENST00000479351 CD164Q04900 197 aa12.32□□□□□ -0.44
CNTNAP3B-206ENST00000479351 SPANXA2-OT1Q8N9U9 137 aa12.3□□□□□ -0.44
CNTNAP3B-206ENST00000479351 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
CNTNAP3B-206ENST00000479351 Q5W150 140 aa12.29□□□□□ -0.44
CNTNAP3B-206ENST00000479351 C1orf195Q5TG92 126 aa12.22□□□□□ -0.45
CNTNAP3B-206ENST00000479351 PSPHP1O15172 72 aa12.21□□□□□ -0.45
CNTNAP3B-206ENST00000479351 IGLV7-46A0A075B6I9 117 aa12.21□□□□□ -0.46
CNTNAP3B-206ENST00000479351 DYNC1H1Q14204 4646 aaKnown RBP12.21□□□□□ -0.46
CNTNAP3B-206ENST00000479351 RETNLBQ9BQ08 111 aa12.2□□□□□ -0.46
CNTNAP3B-206ENST00000479351 Q1T7F1 81 aa12.19□□□□□ -0.46
CNTNAP3B-206ENST00000479351 KRTAP13-3Q3SY46 172 aa12.18□□□□□ -0.46
CNTNAP3B-206ENST00000479351 BRK1Q8WUW1 75 aa12.18□□□□□ -0.46
CNTNAP3B-206ENST00000479351 COA5Q86WW8 74 aa12.17□□□□□ -0.46
CNTNAP3B-206ENST00000479351 KRTAP21-3Q3LHN1 58 aa12.16□□□□□ -0.46
CNTNAP3B-206ENST00000479351 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.46
CNTNAP3B-206ENST00000479351 Q8N9P0 234 aaPredicted RBP12.15□□□□□ -0.46
CNTNAP3B-206ENST00000479351 LINC00313P59037 77 aa12.14□□□□□ -0.47
CNTNAP3B-206ENST00000479351 SMR3BP02814 79 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP3B-206ENST00000479351 FAT1Q14517 4588 aa12.11□□□□□ -0.47
CNTNAP3B-206ENST00000479351 A8MUN3 132 aa12.11□□□□□ -0.47
CNTNAP3B-206ENST00000479351 C8orf87E5RJ46 101 aa12.11□□□□□ -0.47
CNTNAP3B-206ENST00000479351 TYMSOSQ8TAI1 123 aa12.08□□□□□ -0.48
CNTNAP3B-206ENST00000479351 PRO0628Q9UI54 55 aa12.08□□□□□ -0.48
CNTNAP3B-206ENST00000479351 LOC101927531A0A1B0GV80 90 aa12.05□□□□□ -0.48
CNTNAP3B-206ENST00000479351 PRR26Q8N8Z3 221 aa12.05□□□□□ -0.48
CNTNAP3B-206ENST00000479351 APOBP04114 4563 aaKnown RBP12.05□□□□□ -0.48
CNTNAP3B-206ENST00000479351 KRTAP16-1A8MUX0 517 aa12.04□□□□□ -0.48
CNTNAP3B-206ENST00000479351 HRES1P13985 223 aa12.03□□□□□ -0.48
CNTNAP3B-206ENST00000479351 LIMD2Q9BT23 127 aa12.01□□□□□ -0.49
CNTNAP3B-206ENST00000479351 C4orf48Q5BLP8 95 aa12□□□□□ -0.49
CNTNAP3B-206ENST00000479351 RYR2Q92736 4967 aa11.99□□□□□ -0.49
CNTNAP3B-206ENST00000479351 Q5VV11 94 aa11.99□□□□□ -0.49
CNTNAP3B-206ENST00000479351 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
CNTNAP3B-206ENST00000479351 PRR15LQ9BU68 103 aa11.97□□□□□ -0.49
CNTNAP3B-206ENST00000479351 A8MU10 97 aa11.95□□□□□ -0.5
CNTNAP3B-206ENST00000479351 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
CNTNAP3B-206ENST00000479351 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
CNTNAP3B-206ENST00000479351 FAM229AH3BQW9 127 aa11.94□□□□□ -0.5
CNTNAP3B-206ENST00000479351 V9GYY9 64 aa11.93□□□□□ -0.5
CNTNAP3B-206ENST00000479351 SPINK1P00995 79 aa11.91□□□□□ -0.5
CNTNAP3B-206ENST00000479351 LINC00304Q8N9R0 145 aa11.9□□□□□ -0.5
CNTNAP3B-206ENST00000479351 IGKV2-30P06310 120 aa11.88□□□□□ -0.51
CNTNAP3B-206ENST00000479351 PKHD1L1Q86WI1 4243 aa11.87□□□□□ -0.51
CNTNAP3B-206ENST00000479351 IGKV2D-30A0A075B6S6 120 aa11.86□□□□□ -0.51
CNTNAP3B-206ENST00000479351 CHKB-CPT1BH3BT56 60 aa11.86□□□□□ -0.51
CNTNAP3B-206ENST00000479351 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
CNTNAP3B-206ENST00000479351 DMAC1Q96GE9 116 aa11.78□□□□□ -0.52
CNTNAP3B-206ENST00000479351 LINC01558Q9Y6Z2 57 aa11.77□□□□□ -0.53
CNTNAP3B-206ENST00000479351 C9orf92A6NGG3 77 aa11.76□□□□□ -0.53
CNTNAP3B-206ENST00000479351 ACYP2P14621 99 aa11.76□□□□□ -0.53
CNTNAP3B-206ENST00000479351 Q75L30 129 aa11.75□□□□□ -0.53
CNTNAP3B-206ENST00000479351 A6NED7 52 aa11.69□□□□□ -0.54
CNTNAP3B-206ENST00000479351 LRP1Q07954 4544 aaKnown RBP11.69□□□□□ -0.54
CNTNAP3B-206ENST00000479351 RPS29P62273 56 aaKnown RBP11.68□□□□□ -0.54
CNTNAP3B-206ENST00000479351 LCA10Q71F78 164 aa11.68□□□□□ -0.54
CNTNAP3B-206ENST00000479351 SPINK7P58062 85 aa11.65□□□□□ -0.54
CNTNAP3B-206ENST00000479351 RYR3Q15413 4870 aa11.63□□□□□ -0.55
CNTNAP3B-206ENST00000479351 C7orf65Q6ZTY9 151 aa11.62□□□□□ -0.55
CNTNAP3B-206ENST00000479351 Q8N1X5 172 aa11.6□□□□□ -0.55
CNTNAP3B-206ENST00000479351 HSPG2P98160 4391 aa11.59□□□□□ -0.55
CNTNAP3B-206ENST00000479351 TNXBP22105 4242 aa11.57□□□□□ -0.56
CNTNAP3B-206ENST00000479351 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
CNTNAP3B-206ENST00000479351 SPTSSBQ8NFR3 76 aa11.55□□□□□ -0.56
CNTNAP3B-206ENST00000479351 FAT3Q8TDW7 4589 aa11.52□□□□□ -0.56
CNTNAP3B-206ENST00000479351 A8MUU9 505 aa11.5□□□□□ -0.57
CNTNAP3B-206ENST00000479351 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
CNTNAP3B-206ENST00000479351 CDC42SE1Q9NRR8 79 aa11.48□□□□□ -0.57
CNTNAP3B-206ENST00000479351 KRTAP17-1Q9BYP8 105 aa11.46□□□□□ -0.57
CNTNAP3B-206ENST00000479351 PMAIP1Q13794 54 aa11.45□□□□□ -0.58
CNTNAP3B-206ENST00000479351 A0A1B0GU69 56 aa11.43□□□□□ -0.58
CNTNAP3B-206ENST00000479351 RYR1P21817 5038 aa11.42□□□□□ -0.58
CNTNAP3B-206ENST00000479351 Q5VSD8 79 aa11.42□□□□□ -0.58
CNTNAP3B-206ENST00000479351 MYCBP2O75592 4640 aa11.38□□□□□ -0.59
CNTNAP3B-206ENST00000479351 ATP11AUNQ6ZP68 121 aa11.37□□□□□ -0.59
CNTNAP3B-206ENST00000479351 KIAA1109Q2LD37 5005 aa11.36□□□□□ -0.59
CNTNAP3B-206ENST00000479351 KRTAP3-1Q9BYR8 98 aa11.36□□□□□ -0.59
CNTNAP3B-206ENST00000479351 KRTAP10-8P60410 259 aa11.33□□□□□ -0.6
CNTNAP3B-206ENST00000479351 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-206ENST00000479351 SEC61GP60059 68 aa11.29□□□□□ -0.6
CNTNAP3B-206ENST00000479351 A6NN06 94 aa11.27□□□□□ -0.6
CNTNAP3B-206ENST00000479351 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-206ENST00000479351 MIR22HGQ0VDD5 57 aa11.15□□□□□ -0.63
CNTNAP3B-206ENST00000479351 SPATA8Q6RVD6 105 aa11.15□□□□□ -0.63
CNTNAP3B-206ENST00000479351 UQCR11O14957 56 aa11.14□□□□□ -0.63
CNTNAP3B-206ENST00000479351 KTN1-AS1Q86SY8 53 aa11.1□□□□□ -0.63
CNTNAP3B-206ENST00000479351 XP32Q5T750 250 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms