RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 J3KT08 172 aa7.21□□□□□ -1.26
CHD3-210ENST00000479080 K7ERU9 68 aa7.21□□□□□ -1.26
CHD3-210ENST00000479080 Q8N9L7 120 aa7.21□□□□□ -1.26
CHD3-210ENST00000479080 A8MWP4 228 aa7.2□□□□□ -1.26
CHD3-210ENST00000479080 K7EQZ3 153 aa7.2□□□□□ -1.26
CHD3-210ENST00000479080 BPY2O14599 106 aa7.2□□□□□ -1.26
CHD3-210ENST00000479080 A0A1B0GVX0 72 aa7.19□□□□□ -1.26
CHD3-210ENST00000479080 MUC17Q685J3 4493 aa7.18□□□□□ -1.26
CHD3-210ENST00000479080 C9orf92A6NGG3 77 aa7.18□□□□□ -1.26
CHD3-210ENST00000479080 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
CHD3-210ENST00000479080 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
CHD3-210ENST00000479080 LINC00643Q86TS7 51 aa7.17□□□□□ -1.26
CHD3-210ENST00000479080 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
CHD3-210ENST00000479080 IGHV6-1A0A0B4J1U7 121 aa7.16□□□□□ -1.26
CHD3-210ENST00000479080 CXCL6P80162 114 aa7.16□□□□□ -1.26
CHD3-210ENST00000479080 MMP24-AS1A0A0U1RRL7 71 aa7.14□□□□□ -1.27
CHD3-210ENST00000479080 XP32Q5T750 250 aa7.13□□□□□ -1.27
CHD3-210ENST00000479080 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
CHD3-210ENST00000479080 ATP5EP2Q5VTU8 51 aa7.12□□□□□ -1.27
CHD3-210ENST00000479080 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
CHD3-210ENST00000479080 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
CHD3-210ENST00000479080 NDUFB1O75438 58 aa7.1□□□□□ -1.27
CHD3-210ENST00000479080 LINC00313P59037 77 aa7.09□□□□□ -1.27
CHD3-210ENST00000479080 A0A087WVE0 104 aa7.08□□□□□ -1.28
CHD3-210ENST00000479080 WFDC13Q8IUB5 93 aa7.05□□□□□ -1.28
CHD3-210ENST00000479080 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
CHD3-210ENST00000479080 A8MUU9 505 aa7.04□□□□□ -1.28
CHD3-210ENST00000479080 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
CHD3-210ENST00000479080 HCG22E2RYF7 251 aa7.03□□□□□ -1.28
CHD3-210ENST00000479080 TMEM254Q8TBM7 123 aa7.03□□□□□ -1.28
CHD3-210ENST00000479080 hDV103S1A0JD37 113 aa7.02□□□□□ -1.29
CHD3-210ENST00000479080 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
CHD3-210ENST00000479080 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
CHD3-210ENST00000479080 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
CHD3-210ENST00000479080 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
CHD3-210ENST00000479080 Q75L30 129 aa7.01□□□□□ -1.29
CHD3-210ENST00000479080 MRPL34Q9BQ48 92 aaKnown RBP7.01□□□□□ -1.29
CHD3-210ENST00000479080 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
CHD3-210ENST00000479080 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
CHD3-210ENST00000479080 KRTAP4-1Q9BYQ7 146 aa6.94□□□□□ -1.3
CHD3-210ENST00000479080 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
CHD3-210ENST00000479080 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
CHD3-210ENST00000479080 Q5W150 140 aa6.92□□□□□ -1.3
CHD3-210ENST00000479080 ZCCHC13Q8WW36 166 aaKnown RBP6.9□□□□□ -1.3
CHD3-210ENST00000479080 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
CHD3-210ENST00000479080 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
CHD3-210ENST00000479080 NDUFS5O43920 106 aa6.88□□□□□ -1.31
CHD3-210ENST00000479080 MUC2Q02817 5179 aa6.88□□□□□ -1.31
CHD3-210ENST00000479080 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
CHD3-210ENST00000479080 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
CHD3-210ENST00000479080 ATP11AUNQ6ZP68 121 aa6.85□□□□□ -1.31
CHD3-210ENST00000479080 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
CHD3-210ENST00000479080 UQCRQO14949 82 aa6.78□□□□□ -1.32
CHD3-210ENST00000479080 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
CHD3-210ENST00000479080 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
CHD3-210ENST00000479080 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
CHD3-210ENST00000479080 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
CHD3-210ENST00000479080 H0Y9P7 68 aa6.74□□□□□ -1.33
CHD3-210ENST00000479080 ATOX1O00244 68 aa6.74□□□□□ -1.33
CHD3-210ENST00000479080 HRES1P13985 223 aa6.74□□□□□ -1.33
CHD3-210ENST00000479080 SPINK7P58062 85 aa6.74□□□□□ -1.33
CHD3-210ENST00000479080 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
CHD3-210ENST00000479080 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
CHD3-210ENST00000479080 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.34
CHD3-210ENST00000479080 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
CHD3-210ENST00000479080 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
CHD3-210ENST00000479080 SMIM20Q8N5G0 67 aa6.69□□□□□ -1.34
CHD3-210ENST00000479080 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
CHD3-210ENST00000479080 SERP2Q8N6R1 65 aa6.67□□□□□ -1.34
CHD3-210ENST00000479080 LINC00208Q96KT6 92 aa6.67□□□□□ -1.34
CHD3-210ENST00000479080 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
CHD3-210ENST00000479080 LOC101927531A0A1B0GV80 90 aa6.66□□□□□ -1.34
CHD3-210ENST00000479080 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
CHD3-210ENST00000479080 C1orf64Q8NEQ6 169 aa6.65□□□□□ -1.34
CHD3-210ENST00000479080 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
CHD3-210ENST00000479080 MP68P56378 58 aa6.63□□□□□ -1.35
CHD3-210ENST00000479080 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
CHD3-210ENST00000479080 H3BPC8 53 aa6.62□□□□□ -1.35
CHD3-210ENST00000479080 COX7CP15954 63 aa6.61□□□□□ -1.35
CHD3-210ENST00000479080 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
CHD3-210ENST00000479080 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
CHD3-210ENST00000479080 ANAPC13Q9BS18 74 aa6.59□□□□□ -1.35
CHD3-210ENST00000479080 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
CHD3-210ENST00000479080 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
CHD3-210ENST00000479080 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
CHD3-210ENST00000479080 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
CHD3-210ENST00000479080 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
CHD3-210ENST00000479080 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
CHD3-210ENST00000479080 RBM12B-AS1Q9P1G2 102 aa6.51□□□□□ -1.37
CHD3-210ENST00000479080 MT1HP80294 61 aa6.49□□□□□ -1.37
CHD3-210ENST00000479080 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
CHD3-210ENST00000479080 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
CHD3-210ENST00000479080 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
CHD3-210ENST00000479080 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
CHD3-210ENST00000479080 H7BZZ5 65 aa6.44□□□□□ -1.38
CHD3-210ENST00000479080 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
CHD3-210ENST00000479080 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
CHD3-210ENST00000479080 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
CHD3-210ENST00000479080 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
CHD3-210ENST00000479080 A8MUN3 132 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 515.1 ms