RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 A0A1B0GVX0 72 aa7.52□□□□□ -1.21
SMARCAL1-211ENST00000479008 NDUFB1O75438 58 aa7.52□□□□□ -1.21
SMARCAL1-211ENST00000479008 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
SMARCAL1-211ENST00000479008 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
SMARCAL1-211ENST00000479008 LPAP08519 4548 aa7.49□□□□□ -1.21
SMARCAL1-211ENST00000479008 K7EQZ3 153 aa7.49□□□□□ -1.21
SMARCAL1-211ENST00000479008 CXCL6P80162 114 aa7.48□□□□□ -1.21
SMARCAL1-211ENST00000479008 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
SMARCAL1-211ENST00000479008 Q8N9L7 120 aa7.48□□□□□ -1.21
SMARCAL1-211ENST00000479008 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
SMARCAL1-211ENST00000479008 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
SMARCAL1-211ENST00000479008 LINC00313P59037 77 aa7.47□□□□□ -1.21
SMARCAL1-211ENST00000479008 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
SMARCAL1-211ENST00000479008 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
SMARCAL1-211ENST00000479008 ATP5EP2Q5VTU8 51 aa7.45□□□□□ -1.22
SMARCAL1-211ENST00000479008 C8orf17Q9NRJ1 99 aa7.45□□□□□ -1.22
SMARCAL1-211ENST00000479008 XP32Q5T750 250 aa7.44□□□□□ -1.22
SMARCAL1-211ENST00000479008 MMP24-AS1A0A0U1RRL7 71 aa7.41□□□□□ -1.22
SMARCAL1-211ENST00000479008 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
SMARCAL1-211ENST00000479008 LRP2P98164 4655 aa7.39□□□□□ -1.23
SMARCAL1-211ENST00000479008 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
SMARCAL1-211ENST00000479008 WFDC13Q8IUB5 93 aa7.38□□□□□ -1.23
SMARCAL1-211ENST00000479008 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
SMARCAL1-211ENST00000479008 HCG22E2RYF7 251 aa7.36□□□□□ -1.23
SMARCAL1-211ENST00000479008 CASC2Q6XLA1 102 aa7.36□□□□□ -1.23
SMARCAL1-211ENST00000479008 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
SMARCAL1-211ENST00000479008 A8MUU9 505 aa7.35□□□□□ -1.23
SMARCAL1-211ENST00000479008 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
SMARCAL1-211ENST00000479008 Q75L30 129 aa7.35□□□□□ -1.23
SMARCAL1-211ENST00000479008 C20orf166-AS1Q96NR2 134 aa7.35□□□□□ -1.23
SMARCAL1-211ENST00000479008 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
SMARCAL1-211ENST00000479008 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
SMARCAL1-211ENST00000479008 A0A087WVE0 104 aa7.32□□□□□ -1.24
SMARCAL1-211ENST00000479008 Q8N9P0 234 aaPredicted RBP7.31□□□□□ -1.24
SMARCAL1-211ENST00000479008 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
SMARCAL1-211ENST00000479008 MUC17Q685J3 4493 aa7.29□□□□□ -1.24
SMARCAL1-211ENST00000479008 NDUFS5O43920 106 aa7.29□□□□□ -1.24
SMARCAL1-211ENST00000479008 PCOTHQ58A44 107 aa7.28□□□□□ -1.24
SMARCAL1-211ENST00000479008 ATP11AUNQ6ZP68 121 aa7.27□□□□□ -1.25
SMARCAL1-211ENST00000479008 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
SMARCAL1-211ENST00000479008 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
SMARCAL1-211ENST00000479008 TP53AIP1Q9HCN2 124 aa7.18□□□□□ -1.26
SMARCAL1-211ENST00000479008 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
SMARCAL1-211ENST00000479008 FAM236AA0A1B0GUQ0 79 aa7.16□□□□□ -1.26
SMARCAL1-211ENST00000479008 FAM236BA0A1B0GV22 79 aa7.16□□□□□ -1.26
SMARCAL1-211ENST00000479008 Q5W150 140 aa7.16□□□□□ -1.26
SMARCAL1-211ENST00000479008 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
SMARCAL1-211ENST00000479008 SCGB1A1P11684 91 aa7.15□□□□□ -1.26
SMARCAL1-211ENST00000479008 UQCRQO14949 82 aa7.12□□□□□ -1.27
SMARCAL1-211ENST00000479008 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
SMARCAL1-211ENST00000479008 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
SMARCAL1-211ENST00000479008 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
SMARCAL1-211ENST00000479008 SPINK7P58062 85 aa7.07□□□□□ -1.28
SMARCAL1-211ENST00000479008 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
SMARCAL1-211ENST00000479008 H0Y9P7 68 aa7.06□□□□□ -1.28
SMARCAL1-211ENST00000479008 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
SMARCAL1-211ENST00000479008 ATOX1O00244 68 aa7.05□□□□□ -1.28
SMARCAL1-211ENST00000479008 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
SMARCAL1-211ENST00000479008 SMIM20Q8N5G0 67 aa7.04□□□□□ -1.28
SMARCAL1-211ENST00000479008 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
SMARCAL1-211ENST00000479008 MP68P56378 58 aa7.01□□□□□ -1.29
SMARCAL1-211ENST00000479008 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
SMARCAL1-211ENST00000479008 HRES1P13985 223 aa7□□□□□ -1.29
SMARCAL1-211ENST00000479008 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
SMARCAL1-211ENST00000479008 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
SMARCAL1-211ENST00000479008 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
SMARCAL1-211ENST00000479008 MUC2Q02817 5179 aa6.98□□□□□ -1.29
SMARCAL1-211ENST00000479008 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.3
SMARCAL1-211ENST00000479008 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
SMARCAL1-211ENST00000479008 H3BPC8 53 aa6.94□□□□□ -1.3
SMARCAL1-211ENST00000479008 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
SMARCAL1-211ENST00000479008 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
SMARCAL1-211ENST00000479008 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
SMARCAL1-211ENST00000479008 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
SMARCAL1-211ENST00000479008 COX6B2Q6YFQ2 88 aa6.91□□□□□ -1.3
SMARCAL1-211ENST00000479008 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
SMARCAL1-211ENST00000479008 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
SMARCAL1-211ENST00000479008 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
SMARCAL1-211ENST00000479008 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
SMARCAL1-211ENST00000479008 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
SMARCAL1-211ENST00000479008 COX7CP15954 63 aa6.87□□□□□ -1.31
SMARCAL1-211ENST00000479008 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
SMARCAL1-211ENST00000479008 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
SMARCAL1-211ENST00000479008 SNURFQ9Y675 71 aa6.86□□□□□ -1.31
SMARCAL1-211ENST00000479008 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
SMARCAL1-211ENST00000479008 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
SMARCAL1-211ENST00000479008 H1FX-AS1Q4G0G2 97 aa6.76□□□□□ -1.33
SMARCAL1-211ENST00000479008 MT1HP80294 61 aa6.75□□□□□ -1.33
SMARCAL1-211ENST00000479008 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
SMARCAL1-211ENST00000479008 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
SMARCAL1-211ENST00000479008 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
SMARCAL1-211ENST00000479008 A8MUN3 132 aa6.7□□□□□ -1.34
SMARCAL1-211ENST00000479008 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
SMARCAL1-211ENST00000479008 M0R2T5 61 aa6.68□□□□□ -1.34
SMARCAL1-211ENST00000479008 NDUFC1O43677 76 aa6.68□□□□□ -1.34
SMARCAL1-211ENST00000479008 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
SMARCAL1-211ENST00000479008 H7BZZ5 65 aa6.66□□□□□ -1.34
SMARCAL1-211ENST00000479008 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
SMARCAL1-211ENST00000479008 S4R3F8 94 aa6.66□□□□□ -1.34
SMARCAL1-211ENST00000479008 LCA10Q71F78 164 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms