RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 TRBV20-1A0A075B6N2 111 aa8.22□□□□□ -1.09
GARNL3-215ENST00000478702 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
GARNL3-215ENST00000478702 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
GARNL3-215ENST00000478702 KRTAP16-1A8MUX0 517 aa8.21□□□□□ -1.1
GARNL3-215ENST00000478702 DEFB116Q30KQ4 102 aa8.21□□□□□ -1.1
GARNL3-215ENST00000478702 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
GARNL3-215ENST00000478702 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-215ENST00000478702 LINC00313P59037 77 aa8.19□□□□□ -1.1
GARNL3-215ENST00000478702 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
GARNL3-215ENST00000478702 Q6ZQT0 140 aa8.18□□□□□ -1.1
GARNL3-215ENST00000478702 C9orf118A6NHY6 69 aa8.17□□□□□ -1.1
GARNL3-215ENST00000478702 PDE6GP18545 87 aa8.17□□□□□ -1.1
GARNL3-215ENST00000478702 NOTCH2NLQ7Z3S9 236 aa8.17□□□□□ -1.1
GARNL3-215ENST00000478702 IGHV6-1A0A0B4J1U7 121 aa8.16□□□□□ -1.1
GARNL3-215ENST00000478702 A0A1B0GVX0 72 aa8.15□□□□□ -1.1
GARNL3-215ENST00000478702 TAX1BP3O14907 124 aa8.14□□□□□ -1.11
GARNL3-215ENST00000478702 A0A1B0GW54 56 aa8.13□□□□□ -1.11
GARNL3-215ENST00000478702 A0A1W2PPM0 123 aa8.13□□□□□ -1.11
GARNL3-215ENST00000478702 C8orf87E5RJ46 101 aa8.13□□□□□ -1.11
GARNL3-215ENST00000478702 J3KT08 172 aa8.13□□□□□ -1.11
GARNL3-215ENST00000478702 C14orf132Q9NPU4 83 aa8.13□□□□□ -1.11
GARNL3-215ENST00000478702 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
GARNL3-215ENST00000478702 H3BT86 120 aa8.1□□□□□ -1.11
GARNL3-215ENST00000478702 USH2AO75445 5202 aa8.08□□□□□ -1.12
GARNL3-215ENST00000478702 NDUFB1O75438 58 aa8.07□□□□□ -1.12
GARNL3-215ENST00000478702 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
GARNL3-215ENST00000478702 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
GARNL3-215ENST00000478702 SPCS1Q9Y6A9 102 aa8.04□□□□□ -1.12
GARNL3-215ENST00000478702 A8MWP4 228 aa8.03□□□□□ -1.12
GARNL3-215ENST00000478702 NREPQ16612 68 aa8.03□□□□□ -1.12
GARNL3-215ENST00000478702 COL5A1-AS1Q5SY13 56 aa8.03□□□□□ -1.12
GARNL3-215ENST00000478702 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
GARNL3-215ENST00000478702 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
GARNL3-215ENST00000478702 Q8N9P0 234 aaPredicted RBP7.98□□□□□ -1.13
GARNL3-215ENST00000478702 HRES1P13985 223 aa7.97□□□□□ -1.13
GARNL3-215ENST00000478702 ZCCHC13Q8WW36 166 aaKnown RBP7.97□□□□□ -1.13
GARNL3-215ENST00000478702 PRR15Q8IV56 129 aa7.96□□□□□ -1.14
GARNL3-215ENST00000478702 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
GARNL3-215ENST00000478702 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
GARNL3-215ENST00000478702 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
GARNL3-215ENST00000478702 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
GARNL3-215ENST00000478702 Q6ZVQ6 151 aa7.92□□□□□ -1.14
GARNL3-215ENST00000478702 FAM236DA0A1B0GTK5 79 aa7.91□□□□□ -1.14
GARNL3-215ENST00000478702 K7EP34 96 aa7.91□□□□□ -1.14
GARNL3-215ENST00000478702 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
GARNL3-215ENST00000478702 RBM12B-AS1Q9P1G2 102 aa7.91□□□□□ -1.14
GARNL3-215ENST00000478702 PCP4L1A6NKN8 68 aa7.9□□□□□ -1.14
GARNL3-215ENST00000478702 K7EQZ3 153 aa7.9□□□□□ -1.14
GARNL3-215ENST00000478702 PRO0461Q9UI25 63 aa7.9□□□□□ -1.14
GARNL3-215ENST00000478702 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
GARNL3-215ENST00000478702 BPY2O14599 106 aa7.88□□□□□ -1.15
GARNL3-215ENST00000478702 MT2AP02795 61 aa7.88□□□□□ -1.15
GARNL3-215ENST00000478702 TMEM254Q8TBM7 123 aa7.88□□□□□ -1.15
GARNL3-215ENST00000478702 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
GARNL3-215ENST00000478702 SPINK7P58062 85 aa7.86□□□□□ -1.15
GARNL3-215ENST00000478702 GTF2H5Q6ZYL4 71 aa7.86□□□□□ -1.15
GARNL3-215ENST00000478702 hDV103S1A0JD37 113 aa7.83□□□□□ -1.16
GARNL3-215ENST00000478702 MT1FP04733 61 aa7.83□□□□□ -1.16
GARNL3-215ENST00000478702 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
GARNL3-215ENST00000478702 NDUFS5O43920 106 aa7.81□□□□□ -1.16
GARNL3-215ENST00000478702 KRTAP9-3Q9BYQ3 159 aa7.81□□□□□ -1.16
GARNL3-215ENST00000478702 UBL5Q9BZL1 73 aa7.81□□□□□ -1.16
GARNL3-215ENST00000478702 WFDC13Q8IUB5 93 aa7.79□□□□□ -1.16
GARNL3-215ENST00000478702 Q8N9L7 120 aa7.79□□□□□ -1.16
GARNL3-215ENST00000478702 F8W1H4 67 aa7.78□□□□□ -1.16
GARNL3-215ENST00000478702 LINC00846Q9NV44 126 aa7.78□□□□□ -1.16
GARNL3-215ENST00000478702 SYNE2Q8WXH0 6885 aaKnown RBP7.77□□□□□ -1.17
GARNL3-215ENST00000478702 CASC2Q6XLA1 102 aa7.75□□□□□ -1.17
GARNL3-215ENST00000478702 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
GARNL3-215ENST00000478702 ETDBQ3ZM63 59 aa7.72□□□□□ -1.17
GARNL3-215ENST00000478702 HCG22E2RYF7 251 aa7.69□□□□□ -1.18
GARNL3-215ENST00000478702 Q5W150 140 aa7.69□□□□□ -1.18
GARNL3-215ENST00000478702 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
GARNL3-215ENST00000478702 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
GARNL3-215ENST00000478702 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
GARNL3-215ENST00000478702 CXCL6P80162 114 aa7.65□□□□□ -1.18
GARNL3-215ENST00000478702 KRTAP19-6Q3LI70 58 aa7.64□□□□□ -1.19
GARNL3-215ENST00000478702 ACYP1P07311 99 aa7.58□□□□□ -1.2
GARNL3-215ENST00000478702 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
GARNL3-215ENST00000478702 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
GARNL3-215ENST00000478702 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
GARNL3-215ENST00000478702 C4orf26Q17RF5 130 aa7.51□□□□□ -1.21
GARNL3-215ENST00000478702 KRTAP6-3Q3LI67 103 aa7.51□□□□□ -1.21
GARNL3-215ENST00000478702 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
GARNL3-215ENST00000478702 A0A1B0GV90 55 aa7.45□□□□□ -1.22
GARNL3-215ENST00000478702 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
GARNL3-215ENST00000478702 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
GARNL3-215ENST00000478702 LINC00643Q86TS7 51 aa7.39□□□□□ -1.23
GARNL3-215ENST00000478702 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
GARNL3-215ENST00000478702 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
GARNL3-215ENST00000478702 S4R3F8 94 aa7.35□□□□□ -1.23
GARNL3-215ENST00000478702 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
GARNL3-215ENST00000478702 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.23
GARNL3-215ENST00000478702 UQCRQO14949 82 aa7.33□□□□□ -1.24
GARNL3-215ENST00000478702 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
GARNL3-215ENST00000478702 A0A087WVE0 104 aa7.31□□□□□ -1.24
GARNL3-215ENST00000478702 J3QR89 54 aa7.31□□□□□ -1.24
GARNL3-215ENST00000478702 NEBP20929 6669 aa7.3□□□□□ -1.24
GARNL3-215ENST00000478702 LCA10Q71F78 164 aa7.3□□□□□ -1.24
GARNL3-215ENST00000478702 ATOX1O00244 68 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms