RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 NOP10Q9NPE3 64 aaKnown RBP0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 ABCC8Q09428 1581 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 WNK1Q9H4A3 2382 aa0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 ACANP16112 2415 aa0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 ANKHD1Q8IWZ3 2542 aaKnown RBP0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 MMP24-AS1A0A0U1RRL7 71 aa0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 MT1AP04731 61 aa0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 COL6A3P12111 3177 aa0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 MUC2Q02817 5179 aa0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 TOGARAM1Q9Y4F4 1720 aa0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 M0QY20 66 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 M0QZ58 72 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 NDUFA1O15239 70 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 KIF21BO75037 1637 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 NFAT5O94916 1531 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 APC2O95996 2303 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 TNP1P09430 55 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 SONP18583 2426 aaKnown RBP0□□□□□ -2.41
NECTIN3-204ENST00000478327 SPRR2EP22531 72 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 DEFB131AP59861 70 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 CDC42BPAQ5VT25 1732 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 LMO7Q8WWI1 1683 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 STAB1Q9NY15 2570 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 HECTD1Q9ULT8 2610 aa0□□□□□ -2.41
NECTIN3-204ENST00000478327 PRRC2CQ9Y520 2896 aaKnown RBP0□□□□□ -2.41
NECTIN3-204ENST00000478327 ZANQ9Y493 2812 aa-0□□□□□ -2.41
NECTIN3-204ENST00000478327 LPAP08519 4548 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 ABCA5Q8WWZ7 1642 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 NRXN3Q9Y4C0 1643 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 AKAP13Q12802 2813 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 A8MTW9 85 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 SPRR2FQ96RM1 72 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 PKD1L2Q7Z442 2459 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 PRKDCP78527 4128 aaKnown RBP-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 ANKRD36CQ5JPF3 1778 aa-0.01□□□□□ -2.41
NECTIN3-204ENST00000478327 KMT2CQ8NEZ4 4911 aaKnown RBP-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 HECTD4Q9Y4D8 3996 aa-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 SMR3BP02814 79 aaPredicted RBP-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 POLR2KP53803 58 aaKnown RBP-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 KRTAP19-5Q3LI72 72 aa-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 CLPSL2Q6UWE3 100 aa-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 LRP2P98164 4655 aa-0.02□□□□□ -2.41
NECTIN3-204ENST00000478327 CREBBPQ92793 2442 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 NBASA2RRP1 2371 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 FLNBO75369 2602 aaKnown RBP-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 SPTBN4Q9H254 2564 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 SPART-AS1P0CW21 52 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 KRTAP8-1Q8IUC2 63 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 IQGAP1P46940 1657 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 DSPP15924 2871 aaKnown RBP-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 TRPM2O94759 1503 aa-0.03□□□□□ -2.41
NECTIN3-204ENST00000478327 CUBNO60494 3623 aa-0.04□□□□□ -2.42
NECTIN3-204ENST00000478327 SVEP1Q4LDE5 3571 aa-0.04□□□□□ -2.42
NECTIN3-204ENST00000478327 KRTAP19-8Q3LI54 63 aa-0.04□□□□□ -2.42
NECTIN3-204ENST00000478327 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
NECTIN3-204ENST00000478327 LRP1BQ9NZR2 4599 aa-0.04□□□□□ -2.42
NECTIN3-204ENST00000478327 ALMS1Q8TCU4 4167 aa-0.04□□□□□ -2.42
NECTIN3-204ENST00000478327 IQGAP2Q13576 1575 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 SETD2Q9BYW2 2564 aaPredicted RBP-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 DEFB1P60022 68 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 RPL39P62891 51 aaKnown RBP-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 PCLOQ9Y6V0 5065 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 MTORP42345 2549 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 TNRC18O15417 2968 aaPredicted RBP-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 CEP290O15078 2479 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 FAM208AQ9UK61 1670 aaKnown RBP-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 RNF213Q63HN8 5207 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 RYR2Q92736 4967 aa-0.05□□□□□ -2.42
NECTIN3-204ENST00000478327 FASNP49327 2511 aaKnown RBP-0.06□□□□□ -2.42
NECTIN3-204ENST00000478327 LEAP2Q969E1 77 aa-0.06□□□□□ -2.42
NECTIN3-204ENST00000478327 A0A1B0GUL6 1792 aa-0.06□□□□□ -2.42
NECTIN3-204ENST00000478327 DDX60Q8IY21 1712 aaKnown RBP-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 ATP7AQ04656 1500 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 RYR3Q15413 4870 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 SPG11Q96JI7 2443 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 MT1HP80294 61 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 RPL39LQ96EH5 51 aaKnown RBP-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 TOMM7Q9P0U1 55 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 USH2AO75445 5202 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 ACACBO00763 2458 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 SAMD9LQ8IVG5 1584 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 LYSTQ99698 3801 aa-0.07□□□□□ -2.42
NECTIN3-204ENST00000478327 TOP2AP11388 1531 aaKnown RBP-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 ACACAQ13085 2346 aa-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 SNRPGP62308 76 aaKnown RBP-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 NBEAL1Q6ZS30 2694 aa-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 TEP1Q99973 2627 aaKnown RBP-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 TGP01266 2768 aa-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 EPG5Q9HCE0 2579 aa-0.08□□□□□ -2.42
NECTIN3-204ENST00000478327 HTTP42858 3142 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 CLTCL1P53675 1640 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 LAMA5O15230 3695 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 SRRM2Q9UQ35 2752 aaKnown RBP-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 MYO18BQ8IUG5 2567 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 MT1EP04732 61 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 DEFB104AQ8WTQ1 72 aa-0.09□□□□□ -2.42
NECTIN3-204ENST00000478327 GCN1Q92616 2671 aaKnown RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms