RNA–Protein interactions for RNA: ENST00000477666.1

NUB1-206, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 3

Gene NUB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-206ENST00000477666 CHD9Q3L8U1 2897 aa0.92□□□□□ -2.26
NUB1-206ENST00000477666 F8P00451 2351 aa0.91□□□□□ -2.26
NUB1-206ENST00000477666 SPTBN1Q01082 2364 aaKnown RBP0.91□□□□□ -2.26
NUB1-206ENST00000477666 ZNF292O60281 2723 aa0.91□□□□□ -2.26
NUB1-206ENST00000477666 KRTAP19-3Q7Z4W3 81 aa0.91□□□□□ -2.26
NUB1-206ENST00000477666 CRYBG3Q68DQ2 2970 aa0.91□□□□□ -2.26
NUB1-206ENST00000477666 CHD6Q8TD26 2715 aa0.91□□□□□ -2.26
NUB1-206ENST00000477666 COL6A3P12111 3177 aa0.91□□□□□ -2.26
NUB1-206ENST00000477666 NBPF19A0A087WUL8 3843 aa0.9□□□□□ -2.27
NUB1-206ENST00000477666 U3KQA8 63 aa0.9□□□□□ -2.27
NUB1-206ENST00000477666 CACNA1HO95180 2353 aa0.9□□□□□ -2.27
NUB1-206ENST00000477666 ZFHX4Q86UP3 3567 aa0.9□□□□□ -2.27
NUB1-206ENST00000477666 VPS13DQ5THJ4 4388 aa0.89□□□□□ -2.27
NUB1-206ENST00000477666 RPS29P62273 56 aaKnown RBP0.89□□□□□ -2.27
NUB1-206ENST00000477666 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
NUB1-206ENST00000477666 TTC28Q96AY4 2481 aa0.89□□□□□ -2.27
NUB1-206ENST00000477666 PKD1L2Q7Z442 2459 aa0.88□□□□□ -2.27
NUB1-206ENST00000477666 CD52P31358 61 aa0.88□□□□□ -2.27
NUB1-206ENST00000477666 CSMD3Q7Z407 3707 aa0.88□□□□□ -2.27
NUB1-206ENST00000477666 UBR5O95071 2799 aaPredicted RBP0.88□□□□□ -2.27
NUB1-206ENST00000477666 PRM1P04553 51 aa0.87□□□□□ -2.27
NUB1-206ENST00000477666 ABCA12Q86UK0 2595 aa0.87□□□□□ -2.27
NUB1-206ENST00000477666 SPTBN4Q9H254 2564 aa0.87□□□□□ -2.27
NUB1-206ENST00000477666 ACACAQ13085 2346 aa0.87□□□□□ -2.27
NUB1-206ENST00000477666 FRYQ5TBA9 3013 aa0.86□□□□□ -2.27
NUB1-206ENST00000477666 SPTA1P02549 2419 aa0.86□□□□□ -2.27
NUB1-206ENST00000477666 HTN3P15516 51 aa0.86□□□□□ -2.27
NUB1-206ENST00000477666 AKAP9Q99996 3911 aa0.86□□□□□ -2.27
NUB1-206ENST00000477666 DNAH11Q96DT5 4516 aa0.86□□□□□ -2.27
NUB1-206ENST00000477666 APC2O95996 2303 aa0.85□□□□□ -2.27
NUB1-206ENST00000477666 LYSTQ99698 3801 aa0.85□□□□□ -2.27
NUB1-206ENST00000477666 PDZD2O15018 2839 aa0.85□□□□□ -2.27
NUB1-206ENST00000477666 WDR87Q6ZQQ6 2873 aa0.85□□□□□ -2.27
NUB1-206ENST00000477666 RANBP2P49792 3224 aaKnown RBP0.84□□□□□ -2.27
NUB1-206ENST00000477666 NCOR1O75376 2440 aa0.84□□□□□ -2.28
NUB1-206ENST00000477666 CEP290O15078 2479 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 KMT2AQ03164 3969 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 SACSQ9NZJ4 4579 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 FRYLO94915 3013 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 HECTD1Q9ULT8 2610 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 DMBT1Q9UGM3 2413 aaPredicted RBP0.83□□□□□ -2.28
NUB1-206ENST00000477666 CFAP54Q96N23 3096 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 BSNQ9UPA5 3926 aa0.83□□□□□ -2.28
NUB1-206ENST00000477666 DCHS2Q6V1P9 2916 aa0.82□□□□□ -2.28
NUB1-206ENST00000477666 GVINP1Q7Z2Y8 2422 aa0.82□□□□□ -2.28
NUB1-206ENST00000477666 CEP350Q5VT06 3117 aa0.82□□□□□ -2.28
NUB1-206ENST00000477666 COL7A1Q02388 2944 aa0.82□□□□□ -2.28
NUB1-206ENST00000477666 SPENQ96T58 3664 aaKnown RBP0.82□□□□□ -2.28
NUB1-206ENST00000477666 POLQO75417 2590 aa0.81□□□□□ -2.28
NUB1-206ENST00000477666 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
NUB1-206ENST00000477666 CCDC168Q8NDH2 2452 aa0.81□□□□□ -2.28
NUB1-206ENST00000477666 NAV2Q8IVL1 2488 aa0.8□□□□□ -2.28
NUB1-206ENST00000477666 RELNP78509 3460 aa0.8□□□□□ -2.28
NUB1-206ENST00000477666 ITPR3Q14573 2671 aa0.8□□□□□ -2.28
NUB1-206ENST00000477666 SMR3BP02814 79 aaPredicted RBP0.79□□□□□ -2.28
NUB1-206ENST00000477666 COL12A1Q99715 3063 aa0.79□□□□□ -2.28
NUB1-206ENST00000477666 DNAH8Q96JB1 4490 aa0.79□□□□□ -2.28
NUB1-206ENST00000477666 NF1P21359 2839 aa0.78□□□□□ -2.28
NUB1-206ENST00000477666 ANK2Q01484 3957 aa0.78□□□□□ -2.29
NUB1-206ENST00000477666 TNXBP22105 4242 aa0.78□□□□□ -2.29
NUB1-206ENST00000477666 PRUNE2Q8WUY3 3088 aa0.78□□□□□ -2.29
NUB1-206ENST00000477666 C5orf42Q9H799 3197 aa0.78□□□□□ -2.29
NUB1-206ENST00000477666 BOD1L1Q8NFC6 3051 aa0.77□□□□□ -2.29
NUB1-206ENST00000477666 DEFB4AO15263 64 aa0.77□□□□□ -2.29
NUB1-206ENST00000477666 NBEAQ8NFP9 2946 aa0.77□□□□□ -2.29
NUB1-206ENST00000477666 DMXL1Q9Y485 3027 aa0.77□□□□□ -2.29
NUB1-206ENST00000477666 ATRQ13535 2644 aa0.76□□□□□ -2.29
NUB1-206ENST00000477666 APCP25054 2843 aa0.76□□□□□ -2.29
NUB1-206ENST00000477666 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
NUB1-206ENST00000477666 CELSR3Q9NYQ7 3312 aa0.75□□□□□ -2.29
NUB1-206ENST00000477666 PRKDCP78527 4128 aaKnown RBP0.75□□□□□ -2.29
NUB1-206ENST00000477666 MKI67P46013 3256 aaKnown RBP0.75□□□□□ -2.29
NUB1-206ENST00000477666 TRIOO75962 3097 aa0.75□□□□□ -2.29
NUB1-206ENST00000477666 USP24Q9UPU5 2620 aa0.74□□□□□ -2.29
NUB1-206ENST00000477666 ATMQ13315 3056 aa0.74□□□□□ -2.29
NUB1-206ENST00000477666 DNAH12Q6ZR08 3092 aa0.74□□□□□ -2.29
NUB1-206ENST00000477666 TACC2O95359 2948 aa0.74□□□□□ -2.29
NUB1-206ENST00000477666 MT1AP04731 61 aa0.74□□□□□ -2.29
NUB1-206ENST00000477666 STAB1Q9NY15 2570 aa0.74□□□□□ -2.29
NUB1-206ENST00000477666 SZT2Q5T011 3432 aa0.73□□□□□ -2.29
NUB1-206ENST00000477666 ZZEF1O43149 2961 aa0.73□□□□□ -2.29
NUB1-206ENST00000477666 SETD2Q9BYW2 2564 aaPredicted RBP0.73□□□□□ -2.29
NUB1-206ENST00000477666 SMG1Q96Q15 3661 aaKnown RBP0.73□□□□□ -2.29
NUB1-206ENST00000477666 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
NUB1-206ENST00000477666 FAT2Q9NYQ8 4349 aa0.73□□□□□ -2.29
NUB1-206ENST00000477666 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
NUB1-206ENST00000477666 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
NUB1-206ENST00000477666 CUBNO60494 3623 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 NIPBLQ6KC79 2804 aaeCLIP0.72□□□□□ -2.291e-5■□□□□ 11.1
NUB1-206ENST00000477666 DMDP11532 3685 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 FLNCQ14315 2725 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 DNAH3Q8TD57 4116 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 SPRR2DP22532 72 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 KRTAP19-5Q3LI72 72 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 GCN1Q92616 2671 aaKnown RBP0.72□□□□□ -2.29
NUB1-206ENST00000477666 HECTD4Q9Y4D8 3996 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 CREBBPQ92793 2442 aa0.72□□□□□ -2.29
NUB1-206ENST00000477666 LRBAP50851 2863 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms