RNA–Protein interactions for RNA: ENST00000477666.1

NUB1-206, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 3

Gene NUB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-206ENST00000477666 AEBP2Q6ZN18 517 aaPredicted RBP31.18■■■□□ 2.58
NUB1-206ENST00000477666 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
NUB1-206ENST00000477666 PHF23Q9BUL5 403 aaPredicted RBP27.01■■□□□ 1.91
NUB1-206ENST00000477666 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.83
NUB1-206ENST00000477666 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
NUB1-206ENST00000477666 FOXD1Q16676 465 aa24.54■■□□□ 1.52
NUB1-206ENST00000477666 ADRA2BP18089 450 aa23.82■■□□□ 1.4
NUB1-206ENST00000477666 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
NUB1-206ENST00000477666 PIAS4Q8N2W9 510 aaPredicted RBP23.26■■□□□ 1.31
NUB1-206ENST00000477666 MSH5O43196 834 aa22.59■■□□□ 1.21
NUB1-206ENST00000477666 PPP4R3CPQ6ZMV5 832 aa22.15■■□□□ 1.14
NUB1-206ENST00000477666 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
NUB1-206ENST00000477666 KCNA4P22459 653 aa21.87■■□□□ 1.09
NUB1-206ENST00000477666 NCBP3Q53F19 620 aaKnown RBP21.72■■□□□ 1.07
NUB1-206ENST00000477666 MAPK8IP2Q13387 824 aaPredicted RBP21.54■■□□□ 1.04
NUB1-206ENST00000477666 CNKSR2Q8WXI2 1034 aa21.49■■□□□ 1.03
NUB1-206ENST00000477666 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
NUB1-206ENST00000477666 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
NUB1-206ENST00000477666 RNF216Q9NWF9 866 aaPredicted RBP20.99■□□□□ 0.95
NUB1-206ENST00000477666 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
NUB1-206ENST00000477666 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
NUB1-206ENST00000477666 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
NUB1-206ENST00000477666 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
NUB1-206ENST00000477666 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
NUB1-206ENST00000477666 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
NUB1-206ENST00000477666 POTEDQ86YR6 584 aa20.12■□□□□ 0.81
NUB1-206ENST00000477666 FOXD4L1Q9NU39 408 aa20.08■□□□□ 0.81
NUB1-206ENST00000477666 ZBTB22O15209 634 aa20.07■□□□□ 0.8
NUB1-206ENST00000477666 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
NUB1-206ENST00000477666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
NUB1-206ENST00000477666 MYCNP04198 464 aaPredicted RBP19.7■□□□□ 0.74
NUB1-206ENST00000477666 U3KPZ7 1027 aaPredicted RBP19.54■□□□□ 0.72
NUB1-206ENST00000477666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
NUB1-206ENST00000477666 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
NUB1-206ENST00000477666 SAMD1Q6SPF0 538 aaPredicted RBP19.4■□□□□ 0.7
NUB1-206ENST00000477666 ATXN8OSP0DMR3 200 aa19.37■□□□□ 0.69
NUB1-206ENST00000477666 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
NUB1-206ENST00000477666 APLP2Q06481 763 aa19.25■□□□□ 0.67
NUB1-206ENST00000477666 C1QBPQ07021 282 aaKnown RBP19.16■□□□□ 0.66
NUB1-206ENST00000477666 ATF5Q9Y2D1 282 aaPredicted RBP19.11■□□□□ 0.65
NUB1-206ENST00000477666 CAPN15O75808 1086 aa18.96■□□□□ 0.63
NUB1-206ENST00000477666 SPINK5Q9NQ38 1064 aaPredicted RBP18.95■□□□□ 0.62
NUB1-206ENST00000477666 TRHP20396 242 aaPredicted RBP18.92■□□□□ 0.62
NUB1-206ENST00000477666 ZNF219Q9P2Y4 722 aaPredicted RBP18.89■□□□□ 0.61
NUB1-206ENST00000477666 CACNB1Q02641 598 aaPredicted RBP18.76■□□□□ 0.59
NUB1-206ENST00000477666 POLA2Q14181 598 aa18.64■□□□□ 0.57
NUB1-206ENST00000477666 ABCB7O75027 752 aa18.58■□□□□ 0.56
NUB1-206ENST00000477666 DSG3P32926 999 aa18.48■□□□□ 0.55
NUB1-206ENST00000477666 FBLN2P98095 1184 aa18.41■□□□□ 0.54
NUB1-206ENST00000477666 ZBTB12Q9Y330 459 aaPredicted RBP18.36■□□□□ 0.53
NUB1-206ENST00000477666 FKBP8Q14318 412 aa18.31■□□□□ 0.52
NUB1-206ENST00000477666 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
NUB1-206ENST00000477666 SPDYE4A6NLX3 237 aa18.07■□□□□ 0.48
NUB1-206ENST00000477666 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
NUB1-206ENST00000477666 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
NUB1-206ENST00000477666 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
NUB1-206ENST00000477666 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
NUB1-206ENST00000477666 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
NUB1-206ENST00000477666 PROM2Q8N271 834 aa17.67■□□□□ 0.42
NUB1-206ENST00000477666 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
NUB1-206ENST00000477666 SSUH2Q9Y2M2 353 aa17.67■□□□□ 0.42
NUB1-206ENST00000477666 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
NUB1-206ENST00000477666 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
NUB1-206ENST00000477666 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
NUB1-206ENST00000477666 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
NUB1-206ENST00000477666 VASPP50552 380 aaPredicted RBP17.32■□□□□ 0.36
NUB1-206ENST00000477666 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
NUB1-206ENST00000477666 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
NUB1-206ENST00000477666 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
NUB1-206ENST00000477666 MIER1Q8N108 512 aa17.19■□□□□ 0.34
NUB1-206ENST00000477666 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
NUB1-206ENST00000477666 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
NUB1-206ENST00000477666 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
NUB1-206ENST00000477666 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
NUB1-206ENST00000477666 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
NUB1-206ENST00000477666 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
NUB1-206ENST00000477666 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
NUB1-206ENST00000477666 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
NUB1-206ENST00000477666 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
NUB1-206ENST00000477666 SPOCK2Q92563 424 aa16.91■□□□□ 0.3
NUB1-206ENST00000477666 CREBZFQ9NS37 354 aa16.86■□□□□ 0.29
NUB1-206ENST00000477666 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
NUB1-206ENST00000477666 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
NUB1-206ENST00000477666 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
NUB1-206ENST00000477666 FXR2P51116 673 aaKnown RBP eCLIP16.7■□□□□ 0.26
NUB1-206ENST00000477666 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
NUB1-206ENST00000477666 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
NUB1-206ENST00000477666 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
NUB1-206ENST00000477666 PIP4P2Q8N4L2 257 aa16.64■□□□□ 0.25
NUB1-206ENST00000477666 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
NUB1-206ENST00000477666 NUBP1P53384 320 aa16.59■□□□□ 0.25
NUB1-206ENST00000477666 PKD2Q13563 968 aa16.59■□□□□ 0.25
NUB1-206ENST00000477666 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
NUB1-206ENST00000477666 GSE1Q14687 1217 aa16.56■□□□□ 0.24
NUB1-206ENST00000477666 ECM2O94769 699 aaPredicted RBP16.54■□□□□ 0.24
NUB1-206ENST00000477666 FAM212AQ96EL1 285 aa16.54■□□□□ 0.24
NUB1-206ENST00000477666 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
NUB1-206ENST00000477666 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
NUB1-206ENST00000477666 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
NUB1-206ENST00000477666 TSPYL2Q9H2G4 693 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms