RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NDUFB1O75438 58 aa8.91□□□□□ -0.98
VHL-203ENST00000477538 HMCN2Q8NDA2 5059 aa8.9□□□□□ -0.98
VHL-203ENST00000477538 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
VHL-203ENST00000477538 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
VHL-203ENST00000477538 DSCR10P59022 87 aa8.9□□□□□ -0.98
VHL-203ENST00000477538 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
VHL-203ENST00000477538 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
VHL-203ENST00000477538 K7ERU9 68 aa8.87□□□□□ -0.99
VHL-203ENST00000477538 LPAP08519 4548 aa8.85□□□□□ -0.99
VHL-203ENST00000477538 C8orf87E5RJ46 101 aa8.85□□□□□ -0.99
VHL-203ENST00000477538 K7EQZ3 153 aa8.85□□□□□ -0.99
VHL-203ENST00000477538 LINC00313P59037 77 aa8.85□□□□□ -0.99
VHL-203ENST00000477538 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
VHL-203ENST00000477538 CXCL6P80162 114 aa8.84□□□□□ -0.99
VHL-203ENST00000477538 XP32Q5T750 250 aa8.84□□□□□ -0.99
VHL-203ENST00000477538 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
VHL-203ENST00000477538 Q8N9L7 120 aa8.83□□□□□ -1
VHL-203ENST00000477538 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
VHL-203ENST00000477538 LINC00643Q86TS7 51 aa8.81□□□□□ -1
VHL-203ENST00000477538 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
VHL-203ENST00000477538 LRP2P98164 4655 aa8.77□□□□□ -1
VHL-203ENST00000477538 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
VHL-203ENST00000477538 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
VHL-203ENST00000477538 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
VHL-203ENST00000477538 C20orf166-AS1Q96NR2 134 aa8.73□□□□□ -1.01
VHL-203ENST00000477538 hDV103S1A0JD37 113 aa8.72□□□□□ -1.01
VHL-203ENST00000477538 Q75L30 129 aa8.72□□□□□ -1.01
VHL-203ENST00000477538 A8MUU9 505 aa8.71□□□□□ -1.02
VHL-203ENST00000477538 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.02
VHL-203ENST00000477538 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.02
VHL-203ENST00000477538 HIST1H4AP62805 103 aaKnown RBP8.7□□□□□ -1.02
VHL-203ENST00000477538 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
VHL-203ENST00000477538 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
VHL-203ENST00000477538 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
VHL-203ENST00000477538 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
VHL-203ENST00000477538 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
VHL-203ENST00000477538 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
VHL-203ENST00000477538 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
VHL-203ENST00000477538 A0A087WVE0 104 aa8.62□□□□□ -1.03
VHL-203ENST00000477538 NDUFS5O43920 106 aa8.62□□□□□ -1.03
VHL-203ENST00000477538 MT-ATP8P03928 68 aa8.62□□□□□ -1.03
VHL-203ENST00000477538 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
VHL-203ENST00000477538 IMUPQ9GZP8 106 aa8.57□□□□□ -1.04
VHL-203ENST00000477538 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
VHL-203ENST00000477538 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
VHL-203ENST00000477538 KRTAP4-1Q9BYQ7 146 aa8.5□□□□□ -1.05
VHL-203ENST00000477538 TP53AIP1Q9HCN2 124 aa8.49□□□□□ -1.05
VHL-203ENST00000477538 Q5W150 140 aa8.47□□□□□ -1.05
VHL-203ENST00000477538 RNF213Q63HN8 5207 aa8.46□□□□□ -1.06
VHL-203ENST00000477538 FAM236AA0A1B0GUQ0 79 aa8.43□□□□□ -1.06
VHL-203ENST00000477538 FAM236BA0A1B0GV22 79 aa8.43□□□□□ -1.06
VHL-203ENST00000477538 SCGB1A1P11684 91 aa8.42□□□□□ -1.06
VHL-203ENST00000477538 UQCRQO14949 82 aa8.4□□□□□ -1.06
VHL-203ENST00000477538 OCR1Q9BZK8 76 aa8.4□□□□□ -1.06
VHL-203ENST00000477538 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
VHL-203ENST00000477538 SPINK7P58062 85 aa8.38□□□□□ -1.07
VHL-203ENST00000477538 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
VHL-203ENST00000477538 IGKV2-30P06310 120 aa8.35□□□□□ -1.07
VHL-203ENST00000477538 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
VHL-203ENST00000477538 H0Y9P7 68 aa8.33□□□□□ -1.08
VHL-203ENST00000477538 MUC2Q02817 5179 aa8.33□□□□□ -1.08
VHL-203ENST00000477538 ATOX1O00244 68 aa8.32□□□□□ -1.08
VHL-203ENST00000477538 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
VHL-203ENST00000477538 HRES1P13985 223 aa8.3□□□□□ -1.08
VHL-203ENST00000477538 TRAV7A0A075B6U4 112 aa8.28□□□□□ -1.08
VHL-203ENST00000477538 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
VHL-203ENST00000477538 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
VHL-203ENST00000477538 MP68P56378 58 aa8.27□□□□□ -1.09
VHL-203ENST00000477538 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
VHL-203ENST00000477538 C1orf64Q8NEQ6 169 aa8.24□□□□□ -1.09
VHL-203ENST00000477538 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
VHL-203ENST00000477538 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
VHL-203ENST00000477538 MPLKIPQ8TAP9 179 aa8.23□□□□□ -1.09
VHL-203ENST00000477538 CYP4F30PQ9H0H9 118 aa8.23□□□□□ -1.09
VHL-203ENST00000477538 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
VHL-203ENST00000477538 H3BPC8 53 aa8.21□□□□□ -1.1
VHL-203ENST00000477538 COX6B2Q6YFQ2 88 aa8.21□□□□□ -1.1
VHL-203ENST00000477538 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
VHL-203ENST00000477538 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
VHL-203ENST00000477538 SERP2Q8N6R1 65 aa8.19□□□□□ -1.1
VHL-203ENST00000477538 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
VHL-203ENST00000477538 C4orf26Q17RF5 130 aa8.15□□□□□ -1.1
VHL-203ENST00000477538 KLKP1Q107X0 134 aa8.12□□□□□ -1.11
VHL-203ENST00000477538 FAT4Q6V0I7 4981 aa8.1□□□□□ -1.11
VHL-203ENST00000477538 COX7CP15954 63 aa8.08□□□□□ -1.12
VHL-203ENST00000477538 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
VHL-203ENST00000477538 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
VHL-203ENST00000477538 SNURFQ9Y675 71 aa8.07□□□□□ -1.12
VHL-203ENST00000477538 MT1HP80294 61 aa8.03□□□□□ -1.12
VHL-203ENST00000477538 H1FX-AS1Q4G0G2 97 aa8.02□□□□□ -1.13
VHL-203ENST00000477538 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
VHL-203ENST00000477538 FLGP20930 4061 aaPredicted RBP8□□□□□ -1.13
VHL-203ENST00000477538 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
VHL-203ENST00000477538 M0R2T5 61 aa7.95□□□□□ -1.14
VHL-203ENST00000477538 A8MUN3 132 aa7.93□□□□□ -1.14
VHL-203ENST00000477538 CCDC179H3BU77 68 aa7.9□□□□□ -1.14
VHL-203ENST00000477538 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
VHL-203ENST00000477538 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
VHL-203ENST00000477538 S4R3F8 94 aa7.89□□□□□ -1.15
VHL-203ENST00000477538 NDUFC1O43677 76 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms