RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 PDE6GP18545 87 aa13.33□□□□□ -0.28
ARHGEF3-208ENST00000477440 KRTAP16-1A8MUX0 517 aa13.32□□□□□ -0.28
ARHGEF3-208ENST00000477440 IGHV6-1A0A0B4J1U7 121 aa13.31□□□□□ -0.28
ARHGEF3-208ENST00000477440 SPCS1Q9Y6A9 102 aa13.28□□□□□ -0.28
ARHGEF3-208ENST00000477440 A0A1B0GVX0 72 aa13.27□□□□□ -0.29
ARHGEF3-208ENST00000477440 A0A1B0GW54 56 aa13.27□□□□□ -0.29
ARHGEF3-208ENST00000477440 COL5A1-AS1Q5SY13 56 aa13.27□□□□□ -0.29
ARHGEF3-208ENST00000477440 J3KT08 172 aa13.25□□□□□ -0.29
ARHGEF3-208ENST00000477440 C8orf87E5RJ46 101 aa13.2□□□□□ -0.3
ARHGEF3-208ENST00000477440 PCP4L1A6NKN8 68 aa13.17□□□□□ -0.3
ARHGEF3-208ENST00000477440 MT1HP80294 61 aa13.17□□□□□ -0.3
ARHGEF3-208ENST00000477440 SMCPP49901 116 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF3-208ENST00000477440 NDUFB1O75438 58 aa13.13□□□□□ -0.31
ARHGEF3-208ENST00000477440 NREPQ16612 68 aa13.13□□□□□ -0.31
ARHGEF3-208ENST00000477440 COX6B2Q6YFQ2 88 aa13.13□□□□□ -0.31
ARHGEF3-208ENST00000477440 A8MWP4 228 aa13.12□□□□□ -0.31
ARHGEF3-208ENST00000477440 K7EP34 96 aa13.11□□□□□ -0.31
ARHGEF3-208ENST00000477440 IGKV3D-7A0A0C4DH55 119 aa13.09□□□□□ -0.31
ARHGEF3-208ENST00000477440 PRO0461Q9UI25 63 aa13.08□□□□□ -0.32
ARHGEF3-208ENST00000477440 C8orf17Q9NRJ1 99 aa13.06□□□□□ -0.32
ARHGEF3-208ENST00000477440 FLGP20930 4061 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF3-208ENST00000477440 PRR15Q8IV56 129 aa13.01□□□□□ -0.33
ARHGEF3-208ENST00000477440 Q8N9P0 234 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF3-208ENST00000477440 KRTAP9-2Q9BYQ4 174 aa12.97□□□□□ -0.33
ARHGEF3-208ENST00000477440 GTF2H5Q6ZYL4 71 aa12.95□□□□□ -0.34
ARHGEF3-208ENST00000477440 ZCCHC13Q8WW36 166 aaKnown RBP12.95□□□□□ -0.34
ARHGEF3-208ENST00000477440 K7EQZ3 153 aa12.94□□□□□ -0.34
ARHGEF3-208ENST00000477440 Q6ZVQ6 151 aa12.94□□□□□ -0.34
ARHGEF3-208ENST00000477440 MMP24-AS1A0A0U1RRL7 71 aa12.93□□□□□ -0.34
ARHGEF3-208ENST00000477440 M0R2T5 61 aa12.91□□□□□ -0.34
ARHGEF3-208ENST00000477440 BPY2O14599 106 aa12.91□□□□□ -0.34
ARHGEF3-208ENST00000477440 HRES1P13985 223 aa12.87□□□□□ -0.35
ARHGEF3-208ENST00000477440 KRTAP10-6P60371 365 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF3-208ENST00000477440 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
ARHGEF3-208ENST00000477440 LORP23490 312 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF3-208ENST00000477440 MRPL34Q9BQ48 92 aaKnown RBP12.85□□□□□ -0.35
ARHGEF3-208ENST00000477440 LINC00846Q9NV44 126 aa12.85□□□□□ -0.35
ARHGEF3-208ENST00000477440 F8W1H4 67 aa12.84□□□□□ -0.35
ARHGEF3-208ENST00000477440 MPLKIPQ8TAP9 179 aa12.83□□□□□ -0.36
ARHGEF3-208ENST00000477440 hDV103S1A0JD37 113 aa12.82□□□□□ -0.36
ARHGEF3-208ENST00000477440 Q8N9L7 120 aa12.82□□□□□ -0.36
ARHGEF3-208ENST00000477440 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
ARHGEF3-208ENST00000477440 SPINK7P58062 85 aa12.78□□□□□ -0.36
ARHGEF3-208ENST00000477440 UBL5Q9BZL1 73 aa12.78□□□□□ -0.36
ARHGEF3-208ENST00000477440 FAM236DA0A1B0GTK5 79 aa12.77□□□□□ -0.37
ARHGEF3-208ENST00000477440 FAM236CP0DP71 79 aa12.77□□□□□ -0.37
ARHGEF3-208ENST00000477440 RBM12B-AS1Q9P1G2 102 aa12.76□□□□□ -0.37
ARHGEF3-208ENST00000477440 NDUFS5O43920 106 aa12.73□□□□□ -0.37
ARHGEF3-208ENST00000477440 WFDC13Q8IUB5 93 aa12.72□□□□□ -0.37
ARHGEF3-208ENST00000477440 LCE2DQ5TA82 110 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF3-208ENST00000477440 CASC2Q6XLA1 102 aa12.68□□□□□ -0.38
ARHGEF3-208ENST00000477440 HCG22E2RYF7 251 aa12.6□□□□□ -0.39
ARHGEF3-208ENST00000477440 Q5W150 140 aa12.59□□□□□ -0.39
ARHGEF3-208ENST00000477440 CXCL6P80162 114 aa12.53□□□□□ -0.4
ARHGEF3-208ENST00000477440 IGKV2D-30A0A075B6S6 120 aa12.49□□□□□ -0.41
ARHGEF3-208ENST00000477440 IGKV2-30P06310 120 aa12.49□□□□□ -0.41
ARHGEF3-208ENST00000477440 KRTAP9-8Q9BYQ0 159 aa12.49□□□□□ -0.41
ARHGEF3-208ENST00000477440 A0A1B0GV90 55 aa12.46□□□□□ -0.41
ARHGEF3-208ENST00000477440 C7orf65Q6ZTY9 151 aa12.46□□□□□ -0.41
ARHGEF3-208ENST00000477440 ACYP1P07311 99 aa12.44□□□□□ -0.42
ARHGEF3-208ENST00000477440 KRTAP9-6A0A140TA67 174 aa12.43□□□□□ -0.42
ARHGEF3-208ENST00000477440 FAM240AA0A1B0GVK7 77 aa12.42□□□□□ -0.42
ARHGEF3-208ENST00000477440 MT2AP02795 61 aa12.35□□□□□ -0.43
ARHGEF3-208ENST00000477440 FSIP2Q5CZC0 6907 aa12.32□□□□□ -0.44
ARHGEF3-208ENST00000477440 TP53AIP1Q9HCN2 124 aa12.3□□□□□ -0.44
ARHGEF3-208ENST00000477440 ATP5EP2Q5VTU8 51 aa12.29□□□□□ -0.44
ARHGEF3-208ENST00000477440 H1FX-AS1Q4G0G2 97 aa12.28□□□□□ -0.44
ARHGEF3-208ENST00000477440 CRCT1Q9UGL9 99 aa12.28□□□□□ -0.44
ARHGEF3-208ENST00000477440 MT1FP04733 61 aa12.26□□□□□ -0.45
ARHGEF3-208ENST00000477440 C4orf26Q17RF5 130 aa12.25□□□□□ -0.45
ARHGEF3-208ENST00000477440 HIST1H4AP62805 103 aaKnown RBP12.21□□□□□ -0.45
ARHGEF3-208ENST00000477440 KRTAP10-10P60014 251 aa12.17□□□□□ -0.46
ARHGEF3-208ENST00000477440 LINC00643Q86TS7 51 aa12.17□□□□□ -0.46
ARHGEF3-208ENST00000477440 A0A087WVE0 104 aa12.12□□□□□ -0.47
ARHGEF3-208ENST00000477440 TRAV22A0A0B4J277 110 aa12.1□□□□□ -0.47
ARHGEF3-208ENST00000477440 KRTAP9-3Q9BYQ3 159 aa12.09□□□□□ -0.47
ARHGEF3-208ENST00000477440 KRTAP3-1Q9BYR8 98 aa12.09□□□□□ -0.47
ARHGEF3-208ENST00000477440 USH2AO75445 5202 aa12.04□□□□□ -0.48
ARHGEF3-208ENST00000477440 C1orf64Q8NEQ6 169 aa12.04□□□□□ -0.48
ARHGEF3-208ENST00000477440 CYP4F30PQ9H0H9 118 aa12.04□□□□□ -0.48
ARHGEF3-208ENST00000477440 J3QR89 54 aa12.01□□□□□ -0.49
ARHGEF3-208ENST00000477440 UQCRQO14949 82 aa12□□□□□ -0.49
ARHGEF3-208ENST00000477440 LOC101927531A0A1B0GV80 90 aa11.99□□□□□ -0.49
ARHGEF3-208ENST00000477440 LCE2BO14633 110 aa11.99□□□□□ -0.49
ARHGEF3-208ENST00000477440 H0Y9P7 68 aa11.96□□□□□ -0.49
ARHGEF3-208ENST00000477440 S4R3F8 94 aa11.94□□□□□ -0.5
ARHGEF3-208ENST00000477440 C5orf47Q569G3 176 aa11.91□□□□□ -0.5
ARHGEF3-208ENST00000477440 ATOX1O00244 68 aa11.9□□□□□ -0.5
ARHGEF3-208ENST00000477440 SSPOA2VEC9 5147 aa11.88□□□□□ -0.51
ARHGEF3-208ENST00000477440 LCA10Q71F78 164 aa11.87□□□□□ -0.51
ARHGEF3-208ENST00000477440 OCR1Q9BZK8 76 aa11.85□□□□□ -0.51
ARHGEF3-208ENST00000477440 CSAG1Q6PB30 78 aa11.78□□□□□ -0.52
ARHGEF3-208ENST00000477440 LINC00208Q96KT6 92 aa11.78□□□□□ -0.52
ARHGEF3-208ENST00000477440 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
ARHGEF3-208ENST00000477440 MP68P56378 58 aa11.73□□□□□ -0.53
ARHGEF3-208ENST00000477440 KLKP1Q107X0 134 aa11.71□□□□□ -0.53
ARHGEF3-208ENST00000477440 K7ERU9 68 aa11.68□□□□□ -0.54
ARHGEF3-208ENST00000477440 FAM236AA0A1B0GUQ0 79 aa11.67□□□□□ -0.54
ARHGEF3-208ENST00000477440 FAM236BA0A1B0GV22 79 aa11.67□□□□□ -0.54
ARHGEF3-208ENST00000477440 KRTAP19-1Q8IUB9 90 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms