RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 MYCBP2O75592 4640 aa1.04□□□□□ -2.24
NUP58-209ENST00000476553 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
NUP58-209ENST00000476553 SETXQ7Z333 2677 aaKnown RBP1.03□□□□□ -2.24
NUP58-209ENST00000476553 SACSQ9NZJ4 4579 aa1.03□□□□□ -2.24
NUP58-209ENST00000476553 HIVEP3Q5T1R4 2406 aa1.03□□□□□ -2.25
NUP58-209ENST00000476553 PDZD2O15018 2839 aa1.02□□□□□ -2.25
NUP58-209ENST00000476553 LRP1Q07954 4544 aaKnown RBP1.01□□□□□ -2.25
NUP58-209ENST00000476553 M0QZ58 72 aa1.01□□□□□ -2.25
NUP58-209ENST00000476553 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
NUP58-209ENST00000476553 RPL39LQ96EH5 51 aaKnown RBP1□□□□□ -2.25
NUP58-209ENST00000476553 KMT2AQ03164 3969 aa1□□□□□ -2.25
NUP58-209ENST00000476553 ACANP16112 2415 aa0.99□□□□□ -2.25
NUP58-209ENST00000476553 NF1P21359 2839 aa0.99□□□□□ -2.25
NUP58-209ENST00000476553 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
NUP58-209ENST00000476553 DNAH11Q96DT5 4516 aa0.99□□□□□ -2.25
NUP58-209ENST00000476553 H3BNG1 76 aa0.98□□□□□ -2.25
NUP58-209ENST00000476553 WNK1Q9H4A3 2382 aa0.97□□□□□ -2.25
NUP58-209ENST00000476553 SPRR2DP22532 72 aa0.96□□□□□ -2.26
NUP58-209ENST00000476553 LPAP08519 4548 aa0.96□□□□□ -2.26
NUP58-209ENST00000476553 PKD1P98161 4303 aa0.95□□□□□ -2.26
NUP58-209ENST00000476553 TENM3Q9P273 2699 aa0.94□□□□□ -2.26
NUP58-209ENST00000476553 ZZEF1O43149 2961 aa0.94□□□□□ -2.26
NUP58-209ENST00000476553 NAV2Q8IVL1 2488 aa0.94□□□□□ -2.26
NUP58-209ENST00000476553 GCN1Q92616 2671 aaKnown RBP0.93□□□□□ -2.26
NUP58-209ENST00000476553 APC2O95996 2303 aa0.93□□□□□ -2.26
NUP58-209ENST00000476553 TNP1P09430 55 aa0.93□□□□□ -2.26
NUP58-209ENST00000476553 FLNCQ14315 2725 aa0.92□□□□□ -2.26
NUP58-209ENST00000476553 SETD2Q9BYW2 2564 aaPredicted RBP0.92□□□□□ -2.26
NUP58-209ENST00000476553 NSD1Q96L73 2696 aaPredicted RBP0.92□□□□□ -2.26
NUP58-209ENST00000476553 ARHGAP5-AS1Q96IT6 56 aa0.91□□□□□ -2.26
NUP58-209ENST00000476553 DNAH3Q8TD57 4116 aa0.91□□□□□ -2.26
NUP58-209ENST00000476553 COL6A5A8TX70 2615 aa0.9□□□□□ -2.26
NUP58-209ENST00000476553 LEAP2Q969E1 77 aa0.9□□□□□ -2.27
NUP58-209ENST00000476553 NCOR2Q9Y618 2525 aa0.89□□□□□ -2.27
NUP58-209ENST00000476553 TOMM7Q9P0U1 55 aa0.89□□□□□ -2.27
NUP58-209ENST00000476553 FLNBO75369 2602 aaKnown RBP0.89□□□□□ -2.27
NUP58-209ENST00000476553 SPRR2BP35325 72 aa0.88□□□□□ -2.27
NUP58-209ENST00000476553 USP24Q9UPU5 2620 aa0.88□□□□□ -2.27
NUP58-209ENST00000476553 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
NUP58-209ENST00000476553 CACNA1AO00555 2505 aa0.87□□□□□ -2.27
NUP58-209ENST00000476553 VPS13DQ5THJ4 4388 aa0.87□□□□□ -2.27
NUP58-209ENST00000476553 TACC2O95359 2948 aa0.86□□□□□ -2.27
NUP58-209ENST00000476553 DMXL1Q9Y485 3027 aa0.86□□□□□ -2.27
NUP58-209ENST00000476553 HSPG2P98160 4391 aa0.86□□□□□ -2.27
NUP58-209ENST00000476553 SPTBN4Q9H254 2564 aa0.86□□□□□ -2.27
NUP58-209ENST00000476553 DNAH2Q9P225 4427 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 CHD7Q9P2D1 2997 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 STAB1Q9NY15 2570 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 CUBNO60494 3623 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 ANK3Q12955 4377 aaKnown RBP0.85□□□□□ -2.27
NUP58-209ENST00000476553 SPENQ96T58 3664 aaKnown RBP0.85□□□□□ -2.27
NUP58-209ENST00000476553 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 HECTD4Q9Y4D8 3996 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 COL7A1Q02388 2944 aa0.85□□□□□ -2.27
NUP58-209ENST00000476553 ACACAQ13085 2346 aa0.84□□□□□ -2.27
NUP58-209ENST00000476553 DMBT1Q9UGM3 2413 aaPredicted RBP0.84□□□□□ -2.27
NUP58-209ENST00000476553 DEFB110Q30KQ9 67 aa0.84□□□□□ -2.27
NUP58-209ENST00000476553 MTORP42345 2549 aa0.83□□□□□ -2.28
NUP58-209ENST00000476553 DYNC2H1Q8NCM8 4307 aaKnown RBP0.83□□□□□ -2.28
NUP58-209ENST00000476553 DNAH9Q9NYC9 4486 aa0.82□□□□□ -2.28
NUP58-209ENST00000476553 IGSF10Q6WRI0 2623 aa0.81□□□□□ -2.28
NUP58-209ENST00000476553 DCHS2Q6V1P9 2916 aa0.81□□□□□ -2.28
NUP58-209ENST00000476553 ANKRD11Q6UB99 2663 aaPredicted RBP0.8□□□□□ -2.28
NUP58-209ENST00000476553 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
NUP58-209ENST00000476553 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
NUP58-209ENST00000476553 RIF1Q5UIP0 2472 aaKnown RBP0.78□□□□□ -2.28
NUP58-209ENST00000476553 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
NUP58-209ENST00000476553 APOBP04114 4563 aaKnown RBP0.76□□□□□ -2.29
NUP58-209ENST00000476553 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
NUP58-209ENST00000476553 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
NUP58-209ENST00000476553 EPG5Q9HCE0 2579 aa0.76□□□□□ -2.29
NUP58-209ENST00000476553 FAT4Q6V0I7 4981 aa0.75□□□□□ -2.29
NUP58-209ENST00000476553 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
NUP58-209ENST00000476553 FRYQ5TBA9 3013 aa0.75□□□□□ -2.29
NUP58-209ENST00000476553 ANKHD1Q8IWZ3 2542 aaKnown RBP0.75□□□□□ -2.29
NUP58-209ENST00000476553 UTP20O75691 2785 aaKnown RBP0.74□□□□□ -2.29
NUP58-209ENST00000476553 SPRR2AP35326 72 aa0.74□□□□□ -2.29
NUP58-209ENST00000476553 KALRNO60229 2985 aa0.74□□□□□ -2.29
NUP58-209ENST00000476553 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
NUP58-209ENST00000476553 DNAH6Q9C0G6 4158 aa0.73□□□□□ -2.29
NUP58-209ENST00000476553 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
NUP58-209ENST00000476553 SPART-AS1P0CW21 52 aa0.73□□□□□ -2.29
NUP58-209ENST00000476553 DNAH8Q96JB1 4490 aa0.73□□□□□ -2.29
NUP58-209ENST00000476553 FAT3Q8TDW7 4589 aa0.72□□□□□ -2.29
NUP58-209ENST00000476553 PKHD1P08F94 4074 aa0.72□□□□□ -2.29
NUP58-209ENST00000476553 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
NUP58-209ENST00000476553 TENM2Q9NT68 2774 aa0.72□□□□□ -2.29
NUP58-209ENST00000476553 NBPF19A0A087WUL8 3843 aa0.72□□□□□ -2.29
NUP58-209ENST00000476553 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.29
NUP58-209ENST00000476553 TTTY10Q9BZA0 68 aa0.71□□□□□ -2.3
NUP58-209ENST00000476553 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
NUP58-209ENST00000476553 AKAP9Q99996 3911 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 FAM186AA6NE01 2351 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 HMCN2Q8NDA2 5059 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 MT1AP04731 61 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 SPG11Q96JI7 2443 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 ACACBO00763 2458 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
NUP58-209ENST00000476553 COL6A3P12111 3177 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms