RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 UBR5O95071 2799 aaPredicted RBP7.88□□□□□ -1.15
SSPO-205ENST00000475488 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
SSPO-205ENST00000475488 Q6ZRN7 208 aaPredicted RBP7.87□□□□□ -1.15
SSPO-205ENST00000475488 FRYLO94915 3013 aa7.85□□□□□ -1.15
SSPO-205ENST00000475488 LRBAP50851 2863 aa7.84□□□□□ -1.15
SSPO-205ENST00000475488 ASH1LQ9NR48 2969 aaKnown RBP7.83□□□□□ -1.16
SSPO-205ENST00000475488 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
SSPO-205ENST00000475488 P0C880 135 aa7.8□□□□□ -1.16
SSPO-205ENST00000475488 NSD1Q96L73 2696 aaPredicted RBP7.8□□□□□ -1.16
SSPO-205ENST00000475488 BOD1L1Q8NFC6 3051 aa7.79□□□□□ -1.16
SSPO-205ENST00000475488 IGSF10Q6WRI0 2623 aa7.78□□□□□ -1.16
SSPO-205ENST00000475488 TACC2O95359 2948 aa7.77□□□□□ -1.17
SSPO-205ENST00000475488 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
SSPO-205ENST00000475488 A6NN06 94 aa7.77□□□□□ -1.17
SSPO-205ENST00000475488 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
SSPO-205ENST00000475488 UTP20O75691 2785 aaKnown RBP7.75□□□□□ -1.17
SSPO-205ENST00000475488 COL12A1Q99715 3063 aa7.71□□□□□ -1.18
SSPO-205ENST00000475488 KRTAP21-3Q3LHN1 58 aa7.69□□□□□ -1.18
SSPO-205ENST00000475488 USP34Q70CQ2 3546 aa7.69□□□□□ -1.18
SSPO-205ENST00000475488 ITPR1Q14643 2758 aa7.68□□□□□ -1.18
SSPO-205ENST00000475488 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
SSPO-205ENST00000475488 ADGRG4Q8IZF6 3080 aa7.67□□□□□ -1.18
SSPO-205ENST00000475488 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
SSPO-205ENST00000475488 HIVEP1P15822 2718 aa7.65□□□□□ -1.19
SSPO-205ENST00000475488 ATMQ13315 3056 aa7.65□□□□□ -1.19
SSPO-205ENST00000475488 XP32Q5T750 250 aa7.64□□□□□ -1.19
SSPO-205ENST00000475488 NBEAQ8NFP9 2946 aa7.61□□□□□ -1.19
SSPO-205ENST00000475488 EYSQ5T1H1 3165 aa7.6□□□□□ -1.19
SSPO-205ENST00000475488 CELSR2Q9HCU4 2923 aa7.58□□□□□ -1.2
SSPO-205ENST00000475488 ZZEF1O43149 2961 aa7.54□□□□□ -1.2
SSPO-205ENST00000475488 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
SSPO-205ENST00000475488 SPTBN5Q9NRC6 3674 aaKnown RBP7.47□□□□□ -1.21
SSPO-205ENST00000475488 FLNCQ14315 2725 aa7.45□□□□□ -1.22
SSPO-205ENST00000475488 DCHS2Q6V1P9 2916 aa7.4□□□□□ -1.23
SSPO-205ENST00000475488 TNRC18O15417 2968 aaPredicted RBP7.4□□□□□ -1.23
SSPO-205ENST00000475488 DMXL1Q9Y485 3027 aa7.39□□□□□ -1.23
SSPO-205ENST00000475488 TENM4Q6N022 2769 aa7.38□□□□□ -1.23
SSPO-205ENST00000475488 H0YAA0 97 aa7.38□□□□□ -1.23
SSPO-205ENST00000475488 TENM1Q9UKZ4 2725 aa7.37□□□□□ -1.23
SSPO-205ENST00000475488 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
SSPO-205ENST00000475488 MYO15AQ9UKN7 3530 aa7.34□□□□□ -1.23
SSPO-205ENST00000475488 WDFY3Q8IZQ1 3526 aa7.34□□□□□ -1.23
SSPO-205ENST00000475488 LOC400499M0QZD8 3231 aa7.32□□□□□ -1.24
SSPO-205ENST00000475488 ASPMQ8IZT6 3477 aa7.3□□□□□ -1.24
SSPO-205ENST00000475488 NF1P21359 2839 aa7.28□□□□□ -1.24
SSPO-205ENST00000475488 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
SSPO-205ENST00000475488 CELSR1Q9NYQ6 3014 aa7.27□□□□□ -1.25
SSPO-205ENST00000475488 FBN2P35556 2912 aa7.23□□□□□ -1.25
SSPO-205ENST00000475488 ZANQ9Y493 2812 aa7.23□□□□□ -1.25
SSPO-205ENST00000475488 NIPBLQ6KC79 2804 aaeCLIP7.21□□□□□ -1.26
SSPO-205ENST00000475488 NBPF19A0A087WUL8 3843 aa7.17□□□□□ -1.26
SSPO-205ENST00000475488 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
SSPO-205ENST00000475488 DCHS1Q96JQ0 3298 aa7.13□□□□□ -1.27
SSPO-205ENST00000475488 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
SSPO-205ENST00000475488 ZFHX4Q86UP3 3567 aa7.1□□□□□ -1.27
SSPO-205ENST00000475488 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.27
SSPO-205ENST00000475488 RELNP78509 3460 aa7.05□□□□□ -1.28
SSPO-205ENST00000475488 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
SSPO-205ENST00000475488 HRNRQ86YZ3 2850 aaPredicted RBP7.04□□□□□ -1.28
SSPO-205ENST00000475488 LAMA5O15230 3695 aa7.03□□□□□ -1.28
SSPO-205ENST00000475488 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
SSPO-205ENST00000475488 VWFP04275 2813 aa7.02□□□□□ -1.29
SSPO-205ENST00000475488 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
SSPO-205ENST00000475488 TGP01266 2768 aa7□□□□□ -1.29
SSPO-205ENST00000475488 PDZD2O15018 2839 aa6.99□□□□□ -1.29
SSPO-205ENST00000475488 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.29
SSPO-205ENST00000475488 MXRA5Q9NR99 2828 aa6.87□□□□□ -1.31
SSPO-205ENST00000475488 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
SSPO-205ENST00000475488 ZFHX3Q15911 3703 aa6.86□□□□□ -1.31
SSPO-205ENST00000475488 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
SSPO-205ENST00000475488 CUBNO60494 3623 aa6.7□□□□□ -1.34
SSPO-205ENST00000475488 SMG1Q96Q15 3661 aaKnown RBP6.69□□□□□ -1.34
SSPO-205ENST00000475488 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
SSPO-205ENST00000475488 DMDP11532 3685 aa6.64□□□□□ -1.35
SSPO-205ENST00000475488 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
SSPO-205ENST00000475488 SVEP1Q4LDE5 3571 aa6.6□□□□□ -1.35
SSPO-205ENST00000475488 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
SSPO-205ENST00000475488 COL7A1Q02388 2944 aa6.58□□□□□ -1.36
SSPO-205ENST00000475488 FBN1P35555 2871 aaKnown RBP6.56□□□□□ -1.36
SSPO-205ENST00000475488 INE1O15225 51 aa6.53□□□□□ -1.36
SSPO-205ENST00000475488 CSMD2Q7Z408 3487 aa6.49□□□□□ -1.37
SSPO-205ENST00000475488 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
SSPO-205ENST00000475488 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
SSPO-205ENST00000475488 FBN3Q75N90 2809 aa6.47□□□□□ -1.37
SSPO-205ENST00000475488 MUC3AQ02505 3323 aa6.41□□□□□ -1.38
SSPO-205ENST00000475488 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
SSPO-205ENST00000475488 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
SSPO-205ENST00000475488 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
SSPO-205ENST00000475488 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
SSPO-205ENST00000475488 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
SSPO-205ENST00000475488 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
SSPO-205ENST00000475488 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.41
SSPO-205ENST00000475488 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
SSPO-205ENST00000475488 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
SSPO-205ENST00000475488 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
SSPO-205ENST00000475488 ANK3Q12955 4377 aaKnown RBP6.17□□□□□ -1.42
SSPO-205ENST00000475488 BSNQ9UPA5 3926 aa6.17□□□□□ -1.42
SSPO-205ENST00000475488 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
SSPO-205ENST00000475488 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
SSPO-205ENST00000475488 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms