RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 DEFB116Q30KQ4 102 aa12.26□□□□□ -0.45
TMEM54-205ENST00000475208 A0A1B0GV72 72 aa12.25□□□□□ -0.45
TMEM54-205ENST00000475208 SYNE2Q8WXH0 6885 aaKnown RBP12.25□□□□□ -0.45
TMEM54-205ENST00000475208 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
TMEM54-205ENST00000475208 LINC00472Q9H8W2 130 aa12.23□□□□□ -0.45
TMEM54-205ENST00000475208 UBE2V1Q13404 147 aa12.21□□□□□ -0.45
TMEM54-205ENST00000475208 TRACP01848 142 aa12.2□□□□□ -0.46
TMEM54-205ENST00000475208 SCGB1C2P0DMR2 95 aa12.17□□□□□ -0.46
TMEM54-205ENST00000475208 CCKP06307 115 aa12.16□□□□□ -0.46
TMEM54-205ENST00000475208 MTURNQ8N3F0 131 aa12.16□□□□□ -0.46
TMEM54-205ENST00000475208 C8orf87E5RJ46 101 aa12.11□□□□□ -0.47
TMEM54-205ENST00000475208 LINC00846Q9NV44 126 aa12.11□□□□□ -0.47
TMEM54-205ENST00000475208 A0A1B0GVX0 72 aa12.1□□□□□ -0.47
TMEM54-205ENST00000475208 RBM3P98179 157 aaKnown RBP12.08□□□□□ -0.48
TMEM54-205ENST00000475208 ZCCHC13Q8WW36 166 aaKnown RBP12.08□□□□□ -0.48
TMEM54-205ENST00000475208 KRTAP19-6Q3LI70 58 aa12.07□□□□□ -0.48
TMEM54-205ENST00000475208 BAALC-AS2P0C853 105 aa12.06□□□□□ -0.48
TMEM54-205ENST00000475208 SPINK7P58062 85 aa12.06□□□□□ -0.48
TMEM54-205ENST00000475208 M0R143 59 aa12.04□□□□□ -0.48
TMEM54-205ENST00000475208 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
TMEM54-205ENST00000475208 VPS25Q9BRG1 176 aa12.04□□□□□ -0.48
TMEM54-205ENST00000475208 NAA38Q9BRA0 125 aaKnown RBP11.99□□□□□ -0.49
TMEM54-205ENST00000475208 A8MWP4 228 aa11.98□□□□□ -0.49
TMEM54-205ENST00000475208 C9JAW5 83 aa11.98□□□□□ -0.49
TMEM54-205ENST00000475208 SMIM6P0DI80 62 aa11.98□□□□□ -0.49
TMEM54-205ENST00000475208 ATXN8Q156A1 80 aa11.97□□□□□ -0.49
TMEM54-205ENST00000475208 J3KT08 172 aa11.93□□□□□ -0.5
TMEM54-205ENST00000475208 C21orf62-AS1Q17RA5 79 aa11.93□□□□□ -0.5
TMEM54-205ENST00000475208 WFDC13Q8IUB5 93 aa11.93□□□□□ -0.5
TMEM54-205ENST00000475208 Q6ZQT0 140 aa11.92□□□□□ -0.5
TMEM54-205ENST00000475208 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
TMEM54-205ENST00000475208 JMJD7-PLA2G4BH0Y9G9 81 aa11.89□□□□□ -0.51
TMEM54-205ENST00000475208 LOC110117498A0A087WWA1 95 aa11.87□□□□□ -0.51
TMEM54-205ENST00000475208 NDUFB1O75438 58 aa11.85□□□□□ -0.51
TMEM54-205ENST00000475208 LYRM7Q5U5X0 104 aa11.85□□□□□ -0.51
TMEM54-205ENST00000475208 A0A1B0GW54 56 aa11.83□□□□□ -0.52
TMEM54-205ENST00000475208 TSTD3H0UI37 97 aa11.82□□□□□ -0.52
TMEM54-205ENST00000475208 C8orf17Q9NRJ1 99 aa11.82□□□□□ -0.52
TMEM54-205ENST00000475208 PDE6GP18545 87 aa11.81□□□□□ -0.52
TMEM54-205ENST00000475208 BATFQ16520 125 aa11.78□□□□□ -0.52
TMEM54-205ENST00000475208 KRTAP6-3Q3LI67 103 aa11.78□□□□□ -0.52
TMEM54-205ENST00000475208 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
TMEM54-205ENST00000475208 IGKV3D-7A0A0C4DH55 119 aa11.73□□□□□ -0.53
TMEM54-205ENST00000475208 LOC105371267A0A1B0GV96 52 aa11.73□□□□□ -0.53
TMEM54-205ENST00000475208 Q6ZVQ6 151 aa11.71□□□□□ -0.53
TMEM54-205ENST00000475208 C9orf118A6NHY6 69 aa11.7□□□□□ -0.54
TMEM54-205ENST00000475208 H1FX-AS1Q4G0G2 97 aa11.68□□□□□ -0.54
TMEM54-205ENST00000475208 TAX1BP3O14907 124 aa11.67□□□□□ -0.54
TMEM54-205ENST00000475208 NREPQ16612 68 aa11.65□□□□□ -0.54
TMEM54-205ENST00000475208 A0A1W2PPM0 123 aa11.64□□□□□ -0.55
TMEM54-205ENST00000475208 H3BT86 120 aa11.64□□□□□ -0.55
TMEM54-205ENST00000475208 PRR15Q8IV56 129 aa11.63□□□□□ -0.55
TMEM54-205ENST00000475208 TMEM254Q8TBM7 123 aa11.58□□□□□ -0.56
TMEM54-205ENST00000475208 MRPL34Q9BQ48 92 aaKnown RBP11.58□□□□□ -0.56
TMEM54-205ENST00000475208 MMP24-AS1A0A0U1RRL7 71 aa11.57□□□□□ -0.56
TMEM54-205ENST00000475208 NEBP20929 6669 aa11.55□□□□□ -0.56
TMEM54-205ENST00000475208 K7EQZ3 153 aa11.5□□□□□ -0.57
TMEM54-205ENST00000475208 NDUFS5O43920 106 aa11.5□□□□□ -0.57
TMEM54-205ENST00000475208 IGKV2D-30A0A075B6S6 120 aa11.48□□□□□ -0.57
TMEM54-205ENST00000475208 hDV103S1A0JD37 113 aa11.48□□□□□ -0.57
TMEM54-205ENST00000475208 IGKV2-30P06310 120 aa11.48□□□□□ -0.57
TMEM54-205ENST00000475208 SPCS1Q9Y6A9 102 aa11.46□□□□□ -0.57
TMEM54-205ENST00000475208 BPY2O14599 106 aa11.44□□□□□ -0.58
TMEM54-205ENST00000475208 C7orf65Q6ZTY9 151 aa11.44□□□□□ -0.58
TMEM54-205ENST00000475208 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
TMEM54-205ENST00000475208 Q5W150 140 aa11.39□□□□□ -0.59
TMEM54-205ENST00000475208 A6NN06 94 aa11.36□□□□□ -0.59
TMEM54-205ENST00000475208 COL5A1-AS1Q5SY13 56 aa11.35□□□□□ -0.59
TMEM54-205ENST00000475208 MUC12Q9UKN1 5478 aa11.33□□□□□ -0.6
TMEM54-205ENST00000475208 Q8N9L7 120 aa11.33□□□□□ -0.6
TMEM54-205ENST00000475208 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
TMEM54-205ENST00000475208 C4orf26Q17RF5 130 aa11.32□□□□□ -0.6
TMEM54-205ENST00000475208 FAM236AA0A1B0GUQ0 79 aa11.31□□□□□ -0.6
TMEM54-205ENST00000475208 FAM236BA0A1B0GV22 79 aa11.31□□□□□ -0.6
TMEM54-205ENST00000475208 MT1BP07438 61 aa11.3□□□□□ -0.6
TMEM54-205ENST00000475208 C5orf47Q569G3 176 aa11.3□□□□□ -0.6
TMEM54-205ENST00000475208 CASC2Q6XLA1 102 aa11.28□□□□□ -0.6
TMEM54-205ENST00000475208 K7EP34 96 aa11.27□□□□□ -0.61
TMEM54-205ENST00000475208 Q5VV11 94 aa11.26□□□□□ -0.61
TMEM54-205ENST00000475208 HCG22E2RYF7 251 aa11.23□□□□□ -0.61
TMEM54-205ENST00000475208 UBL5Q9BZL1 73 aa11.21□□□□□ -0.61
TMEM54-205ENST00000475208 KRTAP19-8Q3LI54 63 aa11.2□□□□□ -0.62
TMEM54-205ENST00000475208 SPRR2GQ9BYE4 73 aa11.18□□□□□ -0.62
TMEM54-205ENST00000475208 CXCL6P80162 114 aa11.16□□□□□ -0.62
TMEM54-205ENST00000475208 S4R3F8 94 aa11.16□□□□□ -0.62
TMEM54-205ENST00000475208 KRTAP20-1Q3LI63 56 aa11.15□□□□□ -0.62
TMEM54-205ENST00000475208 KRTAP3-1Q9BYR8 98 aa11.14□□□□□ -0.63
TMEM54-205ENST00000475208 KRTAP10-5P60370 271 aa11.13□□□□□ -0.63
TMEM54-205ENST00000475208 CSAG1Q6PB30 78 aa11.12□□□□□ -0.63
TMEM54-205ENST00000475208 GTF2H5Q6ZYL4 71 aa11.11□□□□□ -0.63
TMEM54-205ENST00000475208 LCA10Q71F78 164 aa11.08□□□□□ -0.64
TMEM54-205ENST00000475208 F8W1H4 67 aa11.07□□□□□ -0.64
TMEM54-205ENST00000475208 KRTAP5-9P26371 169 aa11.05□□□□□ -0.64
TMEM54-205ENST00000475208 C1orf64Q8NEQ6 169 aa11.05□□□□□ -0.64
TMEM54-205ENST00000475208 ETDBQ3ZM63 59 aa11.03□□□□□ -0.64
TMEM54-205ENST00000475208 PCP4L1A6NKN8 68 aa11.02□□□□□ -0.65
TMEM54-205ENST00000475208 KLKP1Q107X0 134 aa11.01□□□□□ -0.65
TMEM54-205ENST00000475208 KMT2DO14686 5537 aa10.99□□□□□ -0.65
TMEM54-205ENST00000475208 MDN1Q9NU22 5596 aa10.98□□□□□ -0.65
TMEM54-205ENST00000475208 TP53AIP1Q9HCN2 124 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms