RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PKHD1L1Q86WI1 4243 aa11.34□□□□□ -0.59
SSR1-204ENST00000474597 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
SSR1-204ENST00000474597 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
SSR1-204ENST00000474597 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
SSR1-204ENST00000474597 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
SSR1-204ENST00000474597 OCR1Q9BZK8 76 aa11.31□□□□□ -0.6
SSR1-204ENST00000474597 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
SSR1-204ENST00000474597 KRTAP17-1Q9BYP8 105 aa11.28□□□□□ -0.6
SSR1-204ENST00000474597 EPPK1P58107 5090 aaKnown RBP11.26□□□□□ -0.61
SSR1-204ENST00000474597 C8orf87E5RJ46 101 aa11.25□□□□□ -0.61
SSR1-204ENST00000474597 NOTCH2NLQ7Z3S9 236 aa11.23□□□□□ -0.61
SSR1-204ENST00000474597 KIAA1109Q2LD37 5005 aa11.22□□□□□ -0.61
SSR1-204ENST00000474597 C20orf197Q8N268 126 aa11.22□□□□□ -0.61
SSR1-204ENST00000474597 LINC00313P59037 77 aa11.21□□□□□ -0.62
SSR1-204ENST00000474597 KRTAP10-8P60410 259 aa11.21□□□□□ -0.62
SSR1-204ENST00000474597 TMEM254Q8TBM7 123 aa11.21□□□□□ -0.62
SSR1-204ENST00000474597 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.62
SSR1-204ENST00000474597 NDUFS5O43920 106 aa11.18□□□□□ -0.62
SSR1-204ENST00000474597 C5orf47Q569G3 176 aa11.14□□□□□ -0.63
SSR1-204ENST00000474597 TP53AIP1Q9HCN2 124 aa11.14□□□□□ -0.63
SSR1-204ENST00000474597 SNURFQ9Y675 71 aa11.12□□□□□ -0.63
SSR1-204ENST00000474597 KLKP1Q107X0 134 aa11.11□□□□□ -0.63
SSR1-204ENST00000474597 MP68P56378 58 aa11.09□□□□□ -0.63
SSR1-204ENST00000474597 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
SSR1-204ENST00000474597 CYSTM1Q9H1C7 97 aa11.08□□□□□ -0.64
SSR1-204ENST00000474597 A0A0U1RQV1 116 aa11.07□□□□□ -0.64
SSR1-204ENST00000474597 H0Y9P7 68 aa11.07□□□□□ -0.64
SSR1-204ENST00000474597 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
SSR1-204ENST00000474597 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
SSR1-204ENST00000474597 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
SSR1-204ENST00000474597 OXTP01178 125 aa11.03□□□□□ -0.64
SSR1-204ENST00000474597 TNXBP22105 4242 aa11.03□□□□□ -0.64
SSR1-204ENST00000474597 KRTAP16-1A8MUX0 517 aa11.02□□□□□ -0.65
SSR1-204ENST00000474597 MT1HL1P0DM35 61 aa11.02□□□□□ -0.65
SSR1-204ENST00000474597 NDUFC1O43677 76 aa11.01□□□□□ -0.65
SSR1-204ENST00000474597 Q8N9P0 234 aaPredicted RBP11.01□□□□□ -0.65
SSR1-204ENST00000474597 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
SSR1-204ENST00000474597 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
SSR1-204ENST00000474597 H3BPC8 53 aa11□□□□□ -0.65
SSR1-204ENST00000474597 LINC00208Q96KT6 92 aa11□□□□□ -0.65
SSR1-204ENST00000474597 H7BZZ5 65 aa10.97□□□□□ -0.65
SSR1-204ENST00000474597 TMEM258P61165 79 aa10.96□□□□□ -0.65
SSR1-204ENST00000474597 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
SSR1-204ENST00000474597 C1orf64Q8NEQ6 169 aa10.95□□□□□ -0.66
SSR1-204ENST00000474597 ZCCHC13Q8WW36 166 aaKnown RBP10.95□□□□□ -0.66
SSR1-204ENST00000474597 FP248Q71RG6 208 aaPredicted RBP10.93□□□□□ -0.66
SSR1-204ENST00000474597 DMBT1Q9UGM3 2413 aaPredicted RBP10.91□□□□□ -0.66
SSR1-204ENST00000474597 Q5W150 140 aa10.9□□□□□ -0.66
SSR1-204ENST00000474597 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
SSR1-204ENST00000474597 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
SSR1-204ENST00000474597 BIRC6Q9NR09 4857 aa10.85□□□□□ -0.67
SSR1-204ENST00000474597 FAM236DA0A1B0GTK5 79 aa10.84□□□□□ -0.67
SSR1-204ENST00000474597 FAM236CP0DP71 79 aa10.84□□□□□ -0.67
SSR1-204ENST00000474597 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
SSR1-204ENST00000474597 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
SSR1-204ENST00000474597 C20orf166-AS1Q96NR2 134 aa10.81□□□□□ -0.68
SSR1-204ENST00000474597 A8MUU9 505 aa10.8□□□□□ -0.68
SSR1-204ENST00000474597 PRR4Q16378 134 aa10.79□□□□□ -0.68
SSR1-204ENST00000474597 ATP5EP56381 51 aaPredicted RBP10.79□□□□□ -0.68
SSR1-204ENST00000474597 J3QL48 77 aa10.78□□□□□ -0.68
SSR1-204ENST00000474597 PCOTHQ58A44 107 aa10.78□□□□□ -0.68
SSR1-204ENST00000474597 CYP4F30PQ9H0H9 118 aa10.73□□□□□ -0.69
SSR1-204ENST00000474597 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
SSR1-204ENST00000474597 Q75L30 129 aa10.72□□□□□ -0.69
SSR1-204ENST00000474597 HERC2O95714 4834 aa10.71□□□□□ -0.69
SSR1-204ENST00000474597 IGKV2D-30A0A075B6S6 120 aa10.7□□□□□ -0.7
SSR1-204ENST00000474597 SPANXA2-OT1Q8N9U9 137 aa10.7□□□□□ -0.7
SSR1-204ENST00000474597 ABCA13Q86UQ4 5058 aa10.66□□□□□ -0.7
SSR1-204ENST00000474597 XP32Q5T750 250 aa10.65□□□□□ -0.71
SSR1-204ENST00000474597 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
SSR1-204ENST00000474597 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
SSR1-204ENST00000474597 SERP1Q9Y6X1 66 aa10.62□□□□□ -0.71
SSR1-204ENST00000474597 TPRXLQ17RH7 258 aa10.61□□□□□ -0.71
SSR1-204ENST00000474597 RPL37P61927 97 aaKnown RBP10.61□□□□□ -0.71
SSR1-204ENST00000474597 RPS28P62857 69 aaKnown RBP10.59□□□□□ -0.71
SSR1-204ENST00000474597 HRES1P13985 223 aa10.57□□□□□ -0.72
SSR1-204ENST00000474597 SPINK7P58062 85 aa10.49□□□□□ -0.73
SSR1-204ENST00000474597 ACYP2P14621 99 aa10.42□□□□□ -0.74
SSR1-204ENST00000474597 DMAC1Q96GE9 116 aa10.42□□□□□ -0.74
SSR1-204ENST00000474597 COA5Q86WW8 74 aa10.4□□□□□ -0.74
SSR1-204ENST00000474597 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
SSR1-204ENST00000474597 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
SSR1-204ENST00000474597 A8MUN3 132 aa10.3□□□□□ -0.76
SSR1-204ENST00000474597 LPAP08519 4548 aa10.3□□□□□ -0.76
SSR1-204ENST00000474597 PCLOQ9Y6V0 5065 aa10.29□□□□□ -0.76
SSR1-204ENST00000474597 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
SSR1-204ENST00000474597 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
SSR1-204ENST00000474597 LRP2P98164 4655 aa10.24□□□□□ -0.77
SSR1-204ENST00000474597 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
SSR1-204ENST00000474597 MPLKIPQ8TAP9 179 aa10.21□□□□□ -0.78
SSR1-204ENST00000474597 KRTAP3-1Q9BYR8 98 aa10.18□□□□□ -0.78
SSR1-204ENST00000474597 V9GYY9 64 aa10.12□□□□□ -0.79
SSR1-204ENST00000474597 Q1T7F1 81 aa10.12□□□□□ -0.79
SSR1-204ENST00000474597 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
SSR1-204ENST00000474597 SPTSSBQ8NFR3 76 aa10.05□□□□□ -0.8
SSR1-204ENST00000474597 HERC1Q15751 4861 aa10.03□□□□□ -0.8
SSR1-204ENST00000474597 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
SSR1-204ENST00000474597 PSPHP1O15172 72 aa9.98□□□□□ -0.81
SSR1-204ENST00000474597 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
SSR1-204ENST00000474597 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms