RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CELSR1Q9NYQ6 3014 aa2.63□□□□□ -1.99
CCNL1-215ENST00000474539 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
CCNL1-215ENST00000474539 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
CCNL1-215ENST00000474539 CFAP46Q8IYW2 2715 aa2.62□□□□□ -1.99
CCNL1-215ENST00000474539 A0A0D9SG42 100 aa2.62□□□□□ -1.99
CCNL1-215ENST00000474539 DCHS2Q6V1P9 2916 aa2.62□□□□□ -1.99
CCNL1-215ENST00000474539 ATRQ13535 2644 aa2.62□□□□□ -1.99
CCNL1-215ENST00000474539 ASH1LQ9NR48 2969 aaKnown RBP2.61□□□□□ -1.99
CCNL1-215ENST00000474539 CELSR2Q9HCU4 2923 aa2.61□□□□□ -1.99
CCNL1-215ENST00000474539 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
CCNL1-215ENST00000474539 Q8NDZ9 215 aa2.6□□□□□ -1.99
CCNL1-215ENST00000474539 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
CCNL1-215ENST00000474539 ADGRG4Q8IZF6 3080 aa2.59□□□□□ -1.99
CCNL1-215ENST00000474539 ADM2Q7Z4H4 148 aa2.58□□□□□ -2
CCNL1-215ENST00000474539 STAB1Q9NY15 2570 aa2.58□□□□□ -2
CCNL1-215ENST00000474539 A0A1B0GVY2 172 aa2.58□□□□□ -2
CCNL1-215ENST00000474539 UTP20O75691 2785 aaKnown RBP2.57□□□□□ -2
CCNL1-215ENST00000474539 TENM4Q6N022 2769 aa2.57□□□□□ -2
CCNL1-215ENST00000474539 CMYA5Q8N3K9 4069 aa2.57□□□□□ -2
CCNL1-215ENST00000474539 ANK2Q01484 3957 aa2.57□□□□□ -2
CCNL1-215ENST00000474539 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
CCNL1-215ENST00000474539 ROMO1P60602 79 aa2.56□□□□□ -2
CCNL1-215ENST00000474539 PRRC2CQ9Y520 2896 aaKnown RBP2.54□□□□□ -2
CCNL1-215ENST00000474539 XP32Q5T750 250 aa2.54□□□□□ -2
CCNL1-215ENST00000474539 KRTAP1-4P0C5Y4 121 aa2.53□□□□□ -2
CCNL1-215ENST00000474539 IGSF10Q6WRI0 2623 aa2.53□□□□□ -2
CCNL1-215ENST00000474539 TNP1P09430 55 aa2.53□□□□□ -2
CCNL1-215ENST00000474539 KRTAP10-8P60410 259 aa2.53□□□□□ -2
CCNL1-215ENST00000474539 PP632Q6XCG6 107 aa2.53□□□□□ -2
CCNL1-215ENST00000474539 NSD1Q96L73 2696 aaPredicted RBP2.53□□□□□ -2
CCNL1-215ENST00000474539 COL6A5A8TX70 2615 aa2.53□□□□□ -2
CCNL1-215ENST00000474539 Q5VV11 94 aa2.52□□□□□ -2.01
CCNL1-215ENST00000474539 CSMD3Q7Z407 3707 aa2.51□□□□□ -2.01
CCNL1-215ENST00000474539 KRTAP7-1Q8IUC3 87 aa2.51□□□□□ -2.01
CCNL1-215ENST00000474539 KRTAP13-3Q3SY46 172 aa2.51□□□□□ -2.01
CCNL1-215ENST00000474539 TEP1Q99973 2627 aaKnown RBP2.51□□□□□ -2.01
CCNL1-215ENST00000474539 TACC2O95359 2948 aa2.5□□□□□ -2.01
CCNL1-215ENST00000474539 FBN2P35556 2912 aa2.49□□□□□ -2.01
CCNL1-215ENST00000474539 LRBAP50851 2863 aa2.49□□□□□ -2.01
CCNL1-215ENST00000474539 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
CCNL1-215ENST00000474539 KRTAP11-1Q8IUC1 163 aa2.49□□□□□ -2.01
CCNL1-215ENST00000474539 GCN1Q92616 2671 aaKnown RBP2.49□□□□□ -2.01
CCNL1-215ENST00000474539 ITPR2Q14571 2701 aa2.47□□□□□ -2.01
CCNL1-215ENST00000474539 HRNRQ86YZ3 2850 aaPredicted RBP2.47□□□□□ -2.01
CCNL1-215ENST00000474539 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
CCNL1-215ENST00000474539 DNHD1Q96M86 4753 aa2.47□□□□□ -2.01
CCNL1-215ENST00000474539 ANK3Q12955 4377 aaKnown RBP2.46□□□□□ -2.01
CCNL1-215ENST00000474539 SETXQ7Z333 2677 aaKnown RBP2.46□□□□□ -2.02
CCNL1-215ENST00000474539 MAP1AP78559 2803 aaPredicted RBP2.45□□□□□ -2.02
CCNL1-215ENST00000474539 KRTAP3-3Q9BYR6 98 aa2.45□□□□□ -2.02
CCNL1-215ENST00000474539 KRTAP3-2Q9BYR7 98 aa2.45□□□□□ -2.02
CCNL1-215ENST00000474539 TRRAPQ9Y4A5 3859 aa2.45□□□□□ -2.02
CCNL1-215ENST00000474539 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
CCNL1-215ENST00000474539 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
CCNL1-215ENST00000474539 UBR5O95071 2799 aaPredicted RBP2.44□□□□□ -2.02
CCNL1-215ENST00000474539 TEX15Q9BXT5 2789 aa2.44□□□□□ -2.02
CCNL1-215ENST00000474539 H0YAA0 97 aa2.43□□□□□ -2.02
CCNL1-215ENST00000474539 CHD6Q8TD26 2715 aa2.41□□□□□ -2.02
CCNL1-215ENST00000474539 LYSTQ99698 3801 aa2.41□□□□□ -2.02
CCNL1-215ENST00000474539 DNAH3Q8TD57 4116 aa2.41□□□□□ -2.02
CCNL1-215ENST00000474539 FLNCQ14315 2725 aa2.41□□□□□ -2.02
CCNL1-215ENST00000474539 OTOGQ6ZRI0 2925 aa2.39□□□□□ -2.03
CCNL1-215ENST00000474539 HIVEP1P15822 2718 aa2.39□□□□□ -2.03
CCNL1-215ENST00000474539 PDZD2O15018 2839 aa2.39□□□□□ -2.03
CCNL1-215ENST00000474539 KRTAP16-1A8MUX0 517 aa2.38□□□□□ -2.03
CCNL1-215ENST00000474539 NBEAL1Q6ZS30 2694 aa2.38□□□□□ -2.03
CCNL1-215ENST00000474539 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
CCNL1-215ENST00000474539 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
CCNL1-215ENST00000474539 A6NN06 94 aa2.35□□□□□ -2.03
CCNL1-215ENST00000474539 NOTCH1P46531 2555 aa2.35□□□□□ -2.03
CCNL1-215ENST00000474539 DNAH7Q8WXX0 4024 aa2.34□□□□□ -2.03
CCNL1-215ENST00000474539 CENPEQ02224 2701 aa2.34□□□□□ -2.04
CCNL1-215ENST00000474539 LCE2BO14633 110 aa2.33□□□□□ -2.04
CCNL1-215ENST00000474539 STAB2Q8WWQ8 2551 aa2.32□□□□□ -2.04
CCNL1-215ENST00000474539 NF1P21359 2839 aa2.32□□□□□ -2.04
CCNL1-215ENST00000474539 FLG2Q5D862 2391 aaPredicted RBP2.32□□□□□ -2.04
CCNL1-215ENST00000474539 CYSTM1Q9H1C7 97 aa2.31□□□□□ -2.04
CCNL1-215ENST00000474539 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
CCNL1-215ENST00000474539 APCP25054 2843 aa2.31□□□□□ -2.04
CCNL1-215ENST00000474539 ZANQ9Y493 2812 aa2.31□□□□□ -2.04
CCNL1-215ENST00000474539 FRAS1Q86XX4 4008 aa2.3□□□□□ -2.04
CCNL1-215ENST00000474539 LCE2CQ5TA81 110 aa2.3□□□□□ -2.04
CCNL1-215ENST00000474539 MXRA5Q9NR99 2828 aa2.29□□□□□ -2.04
CCNL1-215ENST00000474539 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.04
CCNL1-215ENST00000474539 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
CCNL1-215ENST00000474539 MT1HL1P0DM35 61 aa2.26□□□□□ -2.05
CCNL1-215ENST00000474539 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
CCNL1-215ENST00000474539 A8MU10 97 aa2.25□□□□□ -2.05
CCNL1-215ENST00000474539 DNAH1Q9P2D7 4330 aa2.24□□□□□ -2.05
CCNL1-215ENST00000474539 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
CCNL1-215ENST00000474539 HYDINQ4G0P3 5121 aa2.22□□□□□ -2.05
CCNL1-215ENST00000474539 RYR3Q15413 4870 aa2.22□□□□□ -2.05
CCNL1-215ENST00000474539 KMT2CQ8NEZ4 4911 aaKnown RBP2.22□□□□□ -2.05
CCNL1-215ENST00000474539 COL7A1Q02388 2944 aa2.22□□□□□ -2.05
CCNL1-215ENST00000474539 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
CCNL1-215ENST00000474539 PKD1L1Q8TDX9 2849 aa2.22□□□□□ -2.05
CCNL1-215ENST00000474539 DYNC2H1Q8NCM8 4307 aaKnown RBP2.22□□□□□ -2.05
CCNL1-215ENST00000474539 PRAC1Q96KF2 57 aa2.21□□□□□ -2.06
CCNL1-215ENST00000474539 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.2□□□□□ -2.06
CCNL1-215ENST00000474539 VWFP04275 2813 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms