RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
CNN3-205ENST00000474409 CXCL6P80162 114 aa4.64□□□□□ -1.67
CNN3-205ENST00000474409 LINC00643Q86TS7 51 aa4.64□□□□□ -1.67
CNN3-205ENST00000474409 K7EQZ3 153 aa4.63□□□□□ -1.67
CNN3-205ENST00000474409 DSCR10P59022 87 aa4.63□□□□□ -1.67
CNN3-205ENST00000474409 HERC1Q15751 4861 aa4.62□□□□□ -1.67
CNN3-205ENST00000474409 TPRXLQ17RH7 258 aa4.62□□□□□ -1.67
CNN3-205ENST00000474409 PRR15Q8IV56 129 aa4.62□□□□□ -1.67
CNN3-205ENST00000474409 Q8N9L7 120 aa4.62□□□□□ -1.67
CNN3-205ENST00000474409 CDIP1Q9H305 208 aa4.62□□□□□ -1.67
CNN3-205ENST00000474409 C8orf87E5RJ46 101 aa4.61□□□□□ -1.67
CNN3-205ENST00000474409 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
CNN3-205ENST00000474409 LINC00313P59037 77 aa4.6□□□□□ -1.67
CNN3-205ENST00000474409 HIST1H4AP62805 103 aaKnown RBP4.6□□□□□ -1.67
CNN3-205ENST00000474409 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
CNN3-205ENST00000474409 LPAP08519 4548 aa4.6□□□□□ -1.67
CNN3-205ENST00000474409 MMP24-AS1A0A0U1RRL7 71 aa4.58□□□□□ -1.68
CNN3-205ENST00000474409 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
CNN3-205ENST00000474409 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
CNN3-205ENST00000474409 HCG22E2RYF7 251 aa4.57□□□□□ -1.68
CNN3-205ENST00000474409 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
CNN3-205ENST00000474409 hDV103S1A0JD37 113 aa4.56□□□□□ -1.68
CNN3-205ENST00000474409 XP32Q5T750 250 aa4.56□□□□□ -1.68
CNN3-205ENST00000474409 A0A087WVE0 104 aa4.55□□□□□ -1.68
CNN3-205ENST00000474409 MT-ATP8P03928 68 aa4.55□□□□□ -1.68
CNN3-205ENST00000474409 CASC2Q6XLA1 102 aa4.55□□□□□ -1.68
CNN3-205ENST00000474409 TMEM254Q8TBM7 123 aa4.55□□□□□ -1.68
CNN3-205ENST00000474409 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
CNN3-205ENST00000474409 MRPL34Q9BQ48 92 aaKnown RBP4.54□□□□□ -1.68
CNN3-205ENST00000474409 NDUFS5O43920 106 aa4.53□□□□□ -1.68
CNN3-205ENST00000474409 LRP2P98164 4655 aa4.53□□□□□ -1.68
CNN3-205ENST00000474409 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
CNN3-205ENST00000474409 A8MUU9 505 aa4.51□□□□□ -1.69
CNN3-205ENST00000474409 RPL37P61927 97 aaKnown RBP4.51□□□□□ -1.69
CNN3-205ENST00000474409 Q75L30 129 aa4.51□□□□□ -1.69
CNN3-205ENST00000474409 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
CNN3-205ENST00000474409 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
CNN3-205ENST00000474409 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
CNN3-205ENST00000474409 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
CNN3-205ENST00000474409 ATP11AUNQ6ZP68 121 aa4.48□□□□□ -1.69
CNN3-205ENST00000474409 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
CNN3-205ENST00000474409 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
CNN3-205ENST00000474409 SCGB1A1P11684 91 aa4.46□□□□□ -1.7
CNN3-205ENST00000474409 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
CNN3-205ENST00000474409 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
CNN3-205ENST00000474409 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
CNN3-205ENST00000474409 TRAV22A0A0B4J277 110 aa4.41□□□□□ -1.7
CNN3-205ENST00000474409 ATOX1O00244 68 aa4.41□□□□□ -1.7
CNN3-205ENST00000474409 KRTAP3-3Q9BYR6 98 aa4.41□□□□□ -1.7
CNN3-205ENST00000474409 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
CNN3-205ENST00000474409 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
CNN3-205ENST00000474409 UQCRQO14949 82 aa4.4□□□□□ -1.71
CNN3-205ENST00000474409 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
CNN3-205ENST00000474409 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
CNN3-205ENST00000474409 Q5W150 140 aa4.39□□□□□ -1.71
CNN3-205ENST00000474409 H0Y9P7 68 aa4.38□□□□□ -1.71
CNN3-205ENST00000474409 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
CNN3-205ENST00000474409 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
CNN3-205ENST00000474409 MP68P56378 58 aa4.37□□□□□ -1.71
CNN3-205ENST00000474409 C7orf65Q6ZTY9 151 aa4.37□□□□□ -1.71
CNN3-205ENST00000474409 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
CNN3-205ENST00000474409 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
CNN3-205ENST00000474409 LOC101927531A0A1B0GV80 90 aa4.34□□□□□ -1.71
CNN3-205ENST00000474409 SPINK7P58062 85 aa4.34□□□□□ -1.71
CNN3-205ENST00000474409 C5orf47Q569G3 176 aa4.34□□□□□ -1.71
CNN3-205ENST00000474409 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
CNN3-205ENST00000474409 LINC00208Q96KT6 92 aa4.33□□□□□ -1.72
CNN3-205ENST00000474409 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
CNN3-205ENST00000474409 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
CNN3-205ENST00000474409 C1orf64Q8NEQ6 169 aa4.32□□□□□ -1.72
CNN3-205ENST00000474409 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
CNN3-205ENST00000474409 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
CNN3-205ENST00000474409 H3BPC8 53 aa4.31□□□□□ -1.72
CNN3-205ENST00000474409 CYP4F30PQ9H0H9 118 aa4.29□□□□□ -1.72
CNN3-205ENST00000474409 MUC2Q02817 5179 aa4.29□□□□□ -1.72
CNN3-205ENST00000474409 FAM236DA0A1B0GTK5 79 aa4.28□□□□□ -1.72
CNN3-205ENST00000474409 FAM236CP0DP71 79 aa4.28□□□□□ -1.72
CNN3-205ENST00000474409 HRES1P13985 223 aa4.28□□□□□ -1.72
CNN3-205ENST00000474409 COX7CP15954 63 aa4.28□□□□□ -1.72
CNN3-205ENST00000474409 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
CNN3-205ENST00000474409 RBM12B-AS1Q9P1G2 102 aa4.28□□□□□ -1.72
CNN3-205ENST00000474409 SNURFQ9Y675 71 aa4.27□□□□□ -1.73
CNN3-205ENST00000474409 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
CNN3-205ENST00000474409 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
CNN3-205ENST00000474409 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
CNN3-205ENST00000474409 KLKP1Q107X0 134 aa4.24□□□□□ -1.73
CNN3-205ENST00000474409 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
CNN3-205ENST00000474409 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
CNN3-205ENST00000474409 CCDC179H3BU77 68 aa4.2□□□□□ -1.74
CNN3-205ENST00000474409 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
CNN3-205ENST00000474409 NDUFC1O43677 76 aa4.18□□□□□ -1.74
CNN3-205ENST00000474409 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
CNN3-205ENST00000474409 A8MUN3 132 aa4.16□□□□□ -1.74
CNN3-205ENST00000474409 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
CNN3-205ENST00000474409 CYSTM1Q9H1C7 97 aa4.15□□□□□ -1.75
CNN3-205ENST00000474409 H7BZZ5 65 aa4.14□□□□□ -1.75
CNN3-205ENST00000474409 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
CNN3-205ENST00000474409 SPANXA2-OT1Q8N9U9 137 aa4.14□□□□□ -1.75
CNN3-205ENST00000474409 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
CNN3-205ENST00000474409 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms