RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
BRCA1-212ENST00000473961 CHD6Q8TD26 2715 aa1.69□□□□□ -2.14
BRCA1-212ENST00000473961 CSMD1Q96PZ7 3565 aa1.69□□□□□ -2.14
BRCA1-212ENST00000473961 MAP1AP78559 2803 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-212ENST00000473961 SPG11Q96JI7 2443 aa1.68□□□□□ -2.14
BRCA1-212ENST00000473961 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
BRCA1-212ENST00000473961 ZFHX4Q86UP3 3567 aa1.68□□□□□ -2.14
BRCA1-212ENST00000473961 CELSR3Q9NYQ7 3312 aa1.68□□□□□ -2.14
BRCA1-212ENST00000473961 ZFHX2Q9C0A1 2572 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-212ENST00000473961 SPTA1P02549 2419 aa1.67□□□□□ -2.14
BRCA1-212ENST00000473961 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
BRCA1-212ENST00000473961 CRIPTQ9P021 101 aa1.67□□□□□ -2.14
BRCA1-212ENST00000473961 ITPR1Q14643 2758 aa1.67□□□□□ -2.14
BRCA1-212ENST00000473961 ANKRD17O75179 2603 aaKnown RBP1.67□□□□□ -2.14
BRCA1-212ENST00000473961 TENM2Q9NT68 2774 aa1.66□□□□□ -2.14
BRCA1-212ENST00000473961 NCOR2Q9Y618 2525 aa1.66□□□□□ -2.14
BRCA1-212ENST00000473961 NBDYA0A0U1RRE5 68 aa1.66□□□□□ -2.14
BRCA1-212ENST00000473961 SPINK1P00995 79 aa1.66□□□□□ -2.14
BRCA1-212ENST00000473961 NBASA2RRP1 2371 aa1.66□□□□□ -2.14
BRCA1-212ENST00000473961 SMG1Q96Q15 3661 aaKnown RBP1.66□□□□□ -2.14
BRCA1-212ENST00000473961 DCHS2Q6V1P9 2916 aa1.66□□□□□ -2.14
BRCA1-212ENST00000473961 SPENQ96T58 3664 aaKnown RBP1.65□□□□□ -2.14
BRCA1-212ENST00000473961 HRNRQ86YZ3 2850 aaPredicted RBP1.65□□□□□ -2.14
BRCA1-212ENST00000473961 RPL37P61927 97 aaKnown RBP1.65□□□□□ -2.15
BRCA1-212ENST00000473961 SPINK6Q6UWN8 80 aa1.65□□□□□ -2.15
BRCA1-212ENST00000473961 LRBAP50851 2863 aa1.65□□□□□ -2.15
BRCA1-212ENST00000473961 SPTBN4Q9H254 2564 aa1.65□□□□□ -2.15
BRCA1-212ENST00000473961 CSPG4Q6UVK1 2322 aa1.65□□□□□ -2.15
BRCA1-212ENST00000473961 MYO15AQ9UKN7 3530 aa1.64□□□□□ -2.15
BRCA1-212ENST00000473961 BOD1L1Q8NFC6 3051 aa1.63□□□□□ -2.15
BRCA1-212ENST00000473961 IGF2RP11717 2491 aa1.63□□□□□ -2.15
BRCA1-212ENST00000473961 DEFB123Q8N688 67 aa1.62□□□□□ -2.15
BRCA1-212ENST00000473961 GVINP1Q7Z2Y8 2422 aa1.62□□□□□ -2.15
BRCA1-212ENST00000473961 ADGRG4Q8IZF6 3080 aa1.62□□□□□ -2.15
BRCA1-212ENST00000473961 DMXL1Q9Y485 3027 aa1.61□□□□□ -2.15
BRCA1-212ENST00000473961 CELSR2Q9HCU4 2923 aa1.61□□□□□ -2.15
BRCA1-212ENST00000473961 PTPN13Q12923 2485 aa1.61□□□□□ -2.15
BRCA1-212ENST00000473961 CELSR1Q9NYQ6 3014 aa1.61□□□□□ -2.15
BRCA1-212ENST00000473961 TLN2Q9Y4G6 2542 aa1.61□□□□□ -2.15
BRCA1-212ENST00000473961 OTOGQ6ZRI0 2925 aa1.6□□□□□ -2.15
BRCA1-212ENST00000473961 TLN1Q9Y490 2541 aaKnown RBP1.6□□□□□ -2.15
BRCA1-212ENST00000473961 COL12A1Q99715 3063 aa1.6□□□□□ -2.15
BRCA1-212ENST00000473961 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
BRCA1-212ENST00000473961 ASH1LQ9NR48 2969 aaKnown RBP1.6□□□□□ -2.15
BRCA1-212ENST00000473961 APCP25054 2843 aa1.6□□□□□ -2.15
BRCA1-212ENST00000473961 SETXQ7Z333 2677 aaKnown RBP1.6□□□□□ -2.15
BRCA1-212ENST00000473961 FBN1P35555 2871 aaKnown RBP1.6□□□□□ -2.15
BRCA1-212ENST00000473961 OTOGLQ3ZCN5 2332 aa1.6□□□□□ -2.15
BRCA1-212ENST00000473961 ANKRD11Q6UB99 2663 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-212ENST00000473961 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.15
BRCA1-212ENST00000473961 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
BRCA1-212ENST00000473961 LOC400499M0QZD8 3231 aa1.59□□□□□ -2.16
BRCA1-212ENST00000473961 HIVEP3Q5T1R4 2406 aa1.58□□□□□ -2.16
BRCA1-212ENST00000473961 RIF1Q5UIP0 2472 aaKnown RBP1.58□□□□□ -2.16
BRCA1-212ENST00000473961 ATMQ13315 3056 aa1.58□□□□□ -2.16
BRCA1-212ENST00000473961 JMJD1CQ15652 2540 aa1.58□□□□□ -2.16
BRCA1-212ENST00000473961 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-212ENST00000473961 TEX15Q9BXT5 2789 aa1.57□□□□□ -2.16
BRCA1-212ENST00000473961 PLAC4Q8WY50 150 aa1.57□□□□□ -2.16
BRCA1-212ENST00000473961 F8P00451 2351 aa1.57□□□□□ -2.16
BRCA1-212ENST00000473961 AKAP9Q99996 3911 aa1.57□□□□□ -2.16
BRCA1-212ENST00000473961 CEP295Q9C0D2 2601 aa1.56□□□□□ -2.16
BRCA1-212ENST00000473961 ASPMQ8IZT6 3477 aa1.56□□□□□ -2.16
BRCA1-212ENST00000473961 INE1O15225 51 aa1.56□□□□□ -2.16
BRCA1-212ENST00000473961 APLNQ9ULZ1 77 aa1.56□□□□□ -2.16
BRCA1-212ENST00000473961 S4R3F8 94 aa1.56□□□□□ -2.16
BRCA1-212ENST00000473961 ZFYVE26Q68DK2 2539 aa1.56□□□□□ -2.16
BRCA1-212ENST00000473961 UTP20O75691 2785 aaKnown RBP1.55□□□□□ -2.16
BRCA1-212ENST00000473961 RELNP78509 3460 aa1.55□□□□□ -2.16
BRCA1-212ENST00000473961 NF1P21359 2839 aa1.55□□□□□ -2.16
BRCA1-212ENST00000473961 LAMA5O15230 3695 aa1.55□□□□□ -2.16
BRCA1-212ENST00000473961 NBPF19A0A087WUL8 3843 aa1.55□□□□□ -2.16
BRCA1-212ENST00000473961 A0A0D9SG42 100 aa1.54□□□□□ -2.16
BRCA1-212ENST00000473961 UBE2DNLQ8IWF7 75 aa1.54□□□□□ -2.16
BRCA1-212ENST00000473961 BSNQ9UPA5 3926 aa1.54□□□□□ -2.16
BRCA1-212ENST00000473961 MYO9AB2RTY4 2548 aa1.54□□□□□ -2.16
BRCA1-212ENST00000473961 SVEP1Q4LDE5 3571 aa1.53□□□□□ -2.16
BRCA1-212ENST00000473961 SONP18583 2426 aaKnown RBP1.53□□□□□ -2.16
BRCA1-212ENST00000473961 EYSQ5T1H1 3165 aa1.53□□□□□ -2.16
BRCA1-212ENST00000473961 CRYBG3Q68DQ2 2970 aa1.53□□□□□ -2.16
BRCA1-212ENST00000473961 GCN1Q92616 2671 aaKnown RBP1.53□□□□□ -2.16
BRCA1-212ENST00000473961 USP9XQ93008 2570 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-212ENST00000473961 NBEAL2Q6ZNJ1 2754 aa1.53□□□□□ -2.17
BRCA1-212ENST00000473961 MXRA5Q9NR99 2828 aa1.52□□□□□ -2.17
BRCA1-212ENST00000473961 RPS29P62273 56 aaKnown RBP1.52□□□□□ -2.17
BRCA1-212ENST00000473961 NAV2Q8IVL1 2488 aa1.51□□□□□ -2.17
BRCA1-212ENST00000473961 UBR5O95071 2799 aaPredicted RBP1.51□□□□□ -2.17
BRCA1-212ENST00000473961 DOPEY1Q5JWR5 2465 aa1.51□□□□□ -2.17
BRCA1-212ENST00000473961 MUC6Q6W4X9 2439 aa1.5□□□□□ -2.17
BRCA1-212ENST00000473961 UNC79Q9P2D8 2635 aa1.5□□□□□ -2.17
BRCA1-212ENST00000473961 M0QZ58 72 aa1.5□□□□□ -2.17
BRCA1-212ENST00000473961 MTORP42345 2549 aa1.5□□□□□ -2.17
BRCA1-212ENST00000473961 USP9YO00507 2555 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-212ENST00000473961 SRRM2Q9UQ35 2752 aaKnown RBP1.49□□□□□ -2.17
BRCA1-212ENST00000473961 PIEZO1Q92508 2521 aa1.48□□□□□ -2.17
BRCA1-212ENST00000473961 EPG5Q9HCE0 2579 aa1.48□□□□□ -2.17
BRCA1-212ENST00000473961 CHD8Q9HCK8 2581 aa1.48□□□□□ -2.17
BRCA1-212ENST00000473961 CCDC168Q8NDH2 2452 aa1.48□□□□□ -2.17
BRCA1-212ENST00000473961 FBN2P35556 2912 aa1.48□□□□□ -2.17
BRCA1-212ENST00000473961 VPS13CQ709C8 3753 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms