RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ASB16-AS1Q495Z4 193 aa10.32□□□□□ -0.76
VARS2-206ENST00000473916 SNURFQ9Y675 71 aa10.32□□□□□ -0.76
VARS2-206ENST00000473916 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
VARS2-206ENST00000473916 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
VARS2-206ENST00000473916 C8orf17Q9NRJ1 99 aa10.31□□□□□ -0.76
VARS2-206ENST00000473916 Q5VSD8 79 aa10.29□□□□□ -0.76
VARS2-206ENST00000473916 Q5XG85 94 aa10.29□□□□□ -0.76
VARS2-206ENST00000473916 hDV103S1A0JD37 113 aa10.29□□□□□ -0.76
VARS2-206ENST00000473916 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
VARS2-206ENST00000473916 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
VARS2-206ENST00000473916 LINC00304Q8N9R0 145 aa10.27□□□□□ -0.77
VARS2-206ENST00000473916 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
VARS2-206ENST00000473916 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
VARS2-206ENST00000473916 LIMD2Q9BT23 127 aa10.25□□□□□ -0.77
VARS2-206ENST00000473916 SPINK1P00995 79 aa10.24□□□□□ -0.77
VARS2-206ENST00000473916 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
VARS2-206ENST00000473916 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
VARS2-206ENST00000473916 RPS28P62857 69 aaKnown RBP10.19□□□□□ -0.78
VARS2-206ENST00000473916 H7BZZ5 65 aa10.17□□□□□ -0.78
VARS2-206ENST00000473916 MRPL34Q9BQ48 92 aaKnown RBP10.16□□□□□ -0.78
VARS2-206ENST00000473916 FLG2Q5D862 2391 aaPredicted RBP10.16□□□□□ -0.78
VARS2-206ENST00000473916 TNXBP22105 4242 aa10.16□□□□□ -0.78
VARS2-206ENST00000473916 NDUFS5O43920 106 aa10.15□□□□□ -0.78
VARS2-206ENST00000473916 SPAG11AQ6PDA7 123 aa10.15□□□□□ -0.78
VARS2-206ENST00000473916 RPS29P62273 56 aaKnown RBP10.13□□□□□ -0.79
VARS2-206ENST00000473916 H0Y9P7 68 aa10.12□□□□□ -0.79
VARS2-206ENST00000473916 LINC00313P59037 77 aa10.12□□□□□ -0.79
VARS2-206ENST00000473916 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
VARS2-206ENST00000473916 C8orf87E5RJ46 101 aa10.11□□□□□ -0.79
VARS2-206ENST00000473916 TMEM258P61165 79 aa10.11□□□□□ -0.79
VARS2-206ENST00000473916 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
VARS2-206ENST00000473916 Q8N1X5 172 aa10.09□□□□□ -0.79
VARS2-206ENST00000473916 LINC00208Q96KT6 92 aa10.09□□□□□ -0.79
VARS2-206ENST00000473916 MYCBP2O75592 4640 aa10.09□□□□□ -0.79
VARS2-206ENST00000473916 RETNLBQ9BQ08 111 aa10.08□□□□□ -0.8
VARS2-206ENST00000473916 TRAV22A0A0B4J277 110 aa10.07□□□□□ -0.8
VARS2-206ENST00000473916 KRTAP16-1A8MUX0 517 aa10.07□□□□□ -0.8
VARS2-206ENST00000473916 MP68P56378 58 aa10.07□□□□□ -0.8
VARS2-206ENST00000473916 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
VARS2-206ENST00000473916 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
VARS2-206ENST00000473916 NDUFC1O43677 76 aa10.04□□□□□ -0.8
VARS2-206ENST00000473916 Q5W150 140 aa10.04□□□□□ -0.8
VARS2-206ENST00000473916 C1orf64Q8NEQ6 169 aa10.02□□□□□ -0.81
VARS2-206ENST00000473916 FAM236DA0A1B0GTK5 79 aa10.01□□□□□ -0.81
VARS2-206ENST00000473916 FAM236CP0DP71 79 aa10.01□□□□□ -0.81
VARS2-206ENST00000473916 Q8N9P0 234 aaPredicted RBP10□□□□□ -0.81
VARS2-206ENST00000473916 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
VARS2-206ENST00000473916 DMBT1Q9UGM3 2413 aaPredicted RBP9.97□□□□□ -0.81
VARS2-206ENST00000473916 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
VARS2-206ENST00000473916 C9orf92A6NGG3 77 aa9.95□□□□□ -0.82
VARS2-206ENST00000473916 H3BPC8 53 aa9.95□□□□□ -0.82
VARS2-206ENST00000473916 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
VARS2-206ENST00000473916 PRR4Q16378 134 aa9.91□□□□□ -0.82
VARS2-206ENST00000473916 OXTP01178 125 aa9.9□□□□□ -0.82
VARS2-206ENST00000473916 C4orf26Q17RF5 130 aa9.9□□□□□ -0.82
VARS2-206ENST00000473916 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
VARS2-206ENST00000473916 PRO0628Q9UI54 55 aa9.89□□□□□ -0.83
VARS2-206ENST00000473916 ATP5EP56381 51 aaPredicted RBP9.83□□□□□ -0.84
VARS2-206ENST00000473916 ABCA13Q86UQ4 5058 aa9.82□□□□□ -0.84
VARS2-206ENST00000473916 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
VARS2-206ENST00000473916 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
VARS2-206ENST00000473916 SEC61GP60059 68 aa9.79□□□□□ -0.84
VARS2-206ENST00000473916 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
VARS2-206ENST00000473916 BIRC6Q9NR09 4857 aa9.78□□□□□ -0.84
VARS2-206ENST00000473916 C20orf166-AS1Q96NR2 134 aa9.77□□□□□ -0.85
VARS2-206ENST00000473916 A8MUU9 505 aa9.77□□□□□ -0.85
VARS2-206ENST00000473916 IGKV2-30P06310 120 aa9.76□□□□□ -0.85
VARS2-206ENST00000473916 SPANXA2-OT1Q8N9U9 137 aa9.75□□□□□ -0.85
VARS2-206ENST00000473916 IGKV2D-30A0A075B6S6 120 aa9.73□□□□□ -0.85
VARS2-206ENST00000473916 IGLV7-46A0A075B6I9 117 aa9.72□□□□□ -0.85
VARS2-206ENST00000473916 HERC2O95714 4834 aa9.72□□□□□ -0.85
VARS2-206ENST00000473916 FP248Q71RG6 208 aaPredicted RBP9.72□□□□□ -0.85
VARS2-206ENST00000473916 V9GYY9 64 aa9.72□□□□□ -0.85
VARS2-206ENST00000473916 HRES1P13985 223 aa9.68□□□□□ -0.86
VARS2-206ENST00000473916 Q75L30 129 aa9.65□□□□□ -0.87
VARS2-206ENST00000473916 XP32Q5T750 250 aa9.61□□□□□ -0.87
VARS2-206ENST00000473916 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
VARS2-206ENST00000473916 SMIM26A0A096LP01 95 aa9.58□□□□□ -0.88
VARS2-206ENST00000473916 COA5Q86WW8 74 aa9.57□□□□□ -0.88
VARS2-206ENST00000473916 LPAP08519 4548 aa9.56□□□□□ -0.88
VARS2-206ENST00000473916 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
VARS2-206ENST00000473916 SPINK7P58062 85 aa9.51□□□□□ -0.89
VARS2-206ENST00000473916 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
VARS2-206ENST00000473916 J3QL48 77 aa9.51□□□□□ -0.89
VARS2-206ENST00000473916 LRP2P98164 4655 aa9.51□□□□□ -0.89
VARS2-206ENST00000473916 ATP11AUNQ6ZP68 121 aa9.49□□□□□ -0.89
VARS2-206ENST00000473916 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
VARS2-206ENST00000473916 TPRXLQ17RH7 258 aa9.46□□□□□ -0.89
VARS2-206ENST00000473916 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
VARS2-206ENST00000473916 BRK1Q8WUW1 75 aa9.44□□□□□ -0.9
VARS2-206ENST00000473916 ACYP2P14621 99 aa9.44□□□□□ -0.9
VARS2-206ENST00000473916 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
VARS2-206ENST00000473916 PMAIP1Q13794 54 aa9.35□□□□□ -0.91
VARS2-206ENST00000473916 Q1T7F1 81 aa9.34□□□□□ -0.91
VARS2-206ENST00000473916 CHKB-CPT1BH3BT56 60 aa9.32□□□□□ -0.92
VARS2-206ENST00000473916 PSPHP1O15172 72 aa9.29□□□□□ -0.92
VARS2-206ENST00000473916 A8MUN3 132 aa9.27□□□□□ -0.93
VARS2-206ENST00000473916 HERC1Q15751 4861 aa9.27□□□□□ -0.93
VARS2-206ENST00000473916 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
VARS2-206ENST00000473916 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms