RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 MT1HP80294 61 aa6.97□□□□□ -1.29
SHROOM3-204ENST00000473602 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
SHROOM3-204ENST00000473602 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
SHROOM3-204ENST00000473602 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
SHROOM3-204ENST00000473602 TRACP01848 142 aa6.95□□□□□ -1.3
SHROOM3-204ENST00000473602 ANKRD29Q8N6D5 301 aa6.95□□□□□ -1.3
SHROOM3-204ENST00000473602 A0A087WSZ3 146 aa6.94□□□□□ -1.3
SHROOM3-204ENST00000473602 ACYP1P07311 99 aa6.94□□□□□ -1.3
SHROOM3-204ENST00000473602 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
SHROOM3-204ENST00000473602 A0A1B0GV72 72 aa6.92□□□□□ -1.3
SHROOM3-204ENST00000473602 A0A1W2PNM2 257 aa6.92□□□□□ -1.3
SHROOM3-204ENST00000473602 FAM240AA0A1B0GVK7 77 aa6.91□□□□□ -1.3
SHROOM3-204ENST00000473602 C9JAW5 83 aa6.9□□□□□ -1.3
SHROOM3-204ENST00000473602 OBSCN-AS1Q96MR7 158 aa6.9□□□□□ -1.3
SHROOM3-204ENST00000473602 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
SHROOM3-204ENST00000473602 Q75L30 129 aa6.89□□□□□ -1.31
SHROOM3-204ENST00000473602 Q96NJ1 140 aa6.89□□□□□ -1.31
SHROOM3-204ENST00000473602 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
SHROOM3-204ENST00000473602 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
SHROOM3-204ENST00000473602 CCKP06307 115 aa6.87□□□□□ -1.31
SHROOM3-204ENST00000473602 RBM3P98179 157 aaKnown RBP6.85□□□□□ -1.31
SHROOM3-204ENST00000473602 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
SHROOM3-204ENST00000473602 ATP11AUNQ6ZP68 121 aa6.85□□□□□ -1.31
SHROOM3-204ENST00000473602 DSCR8Q96T75 97 aa6.84□□□□□ -1.31
SHROOM3-204ENST00000473602 IMUPQ9GZP8 106 aa6.84□□□□□ -1.31
SHROOM3-204ENST00000473602 M0R2T5 61 aa6.83□□□□□ -1.32
SHROOM3-204ENST00000473602 BAALC-AS2P0C853 105 aa6.83□□□□□ -1.32
SHROOM3-204ENST00000473602 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
SHROOM3-204ENST00000473602 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
SHROOM3-204ENST00000473602 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
SHROOM3-204ENST00000473602 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
SHROOM3-204ENST00000473602 A8MUU9 505 aa6.8□□□□□ -1.32
SHROOM3-204ENST00000473602 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
SHROOM3-204ENST00000473602 JMJD7-PLA2G4BH0Y9G9 81 aa6.78□□□□□ -1.32
SHROOM3-204ENST00000473602 DSCR10P59022 87 aa6.78□□□□□ -1.32
SHROOM3-204ENST00000473602 LINC00313P59037 77 aa6.78□□□□□ -1.32
SHROOM3-204ENST00000473602 A0A1B0GW54 56 aa6.76□□□□□ -1.33
SHROOM3-204ENST00000473602 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
SHROOM3-204ENST00000473602 LINC00643Q86TS7 51 aa6.75□□□□□ -1.33
SHROOM3-204ENST00000473602 J3KT08 172 aa6.74□□□□□ -1.33
SHROOM3-204ENST00000473602 PDE6GP18545 87 aa6.74□□□□□ -1.33
SHROOM3-204ENST00000473602 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
SHROOM3-204ENST00000473602 USH2AO75445 5202 aa6.74□□□□□ -1.33
SHROOM3-204ENST00000473602 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
SHROOM3-204ENST00000473602 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
SHROOM3-204ENST00000473602 Q6ZQT0 140 aa6.73□□□□□ -1.33
SHROOM3-204ENST00000473602 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
SHROOM3-204ENST00000473602 IGHV6-1A0A0B4J1U7 121 aa6.72□□□□□ -1.33
SHROOM3-204ENST00000473602 C8orf87E5RJ46 101 aa6.72□□□□□ -1.33
SHROOM3-204ENST00000473602 ANAPC13Q9BS18 74 aa6.72□□□□□ -1.33
SHROOM3-204ENST00000473602 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
SHROOM3-204ENST00000473602 MT-ATP8P03928 68 aa6.7□□□□□ -1.34
SHROOM3-204ENST00000473602 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
SHROOM3-204ENST00000473602 C14orf132Q9NPU4 83 aa6.68□□□□□ -1.34
SHROOM3-204ENST00000473602 NDUFB1O75438 58 aa6.67□□□□□ -1.34
SHROOM3-204ENST00000473602 ATP5EP2Q5VTU8 51 aa6.67□□□□□ -1.34
SHROOM3-204ENST00000473602 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.35
SHROOM3-204ENST00000473602 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
SHROOM3-204ENST00000473602 A8MWP4 228 aa6.63□□□□□ -1.35
SHROOM3-204ENST00000473602 ATOX1O00244 68 aa6.61□□□□□ -1.35
SHROOM3-204ENST00000473602 NREPQ16612 68 aa6.61□□□□□ -1.35
SHROOM3-204ENST00000473602 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
SHROOM3-204ENST00000473602 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
SHROOM3-204ENST00000473602 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
SHROOM3-204ENST00000473602 UBL5Q9BZL1 73 aa6.59□□□□□ -1.35
SHROOM3-204ENST00000473602 IGKV3D-7A0A0C4DH55 119 aa6.58□□□□□ -1.36
SHROOM3-204ENST00000473602 C8orf17Q9NRJ1 99 aa6.58□□□□□ -1.36
SHROOM3-204ENST00000473602 UQCRQO14949 82 aa6.57□□□□□ -1.36
SHROOM3-204ENST00000473602 ZCCHC13Q8WW36 166 aaKnown RBP6.57□□□□□ -1.36
SHROOM3-204ENST00000473602 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
SHROOM3-204ENST00000473602 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
SHROOM3-204ENST00000473602 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
SHROOM3-204ENST00000473602 RBM12B-AS1Q9P1G2 102 aa6.55□□□□□ -1.36
SHROOM3-204ENST00000473602 HRES1P13985 223 aa6.54□□□□□ -1.36
SHROOM3-204ENST00000473602 MPLKIPQ8TAP9 179 aa6.54□□□□□ -1.36
SHROOM3-204ENST00000473602 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
SHROOM3-204ENST00000473602 FAM236DA0A1B0GTK5 79 aa6.53□□□□□ -1.36
SHROOM3-204ENST00000473602 FAM236CP0DP71 79 aa6.53□□□□□ -1.36
SHROOM3-204ENST00000473602 Q6ZVQ6 151 aa6.53□□□□□ -1.36
SHROOM3-204ENST00000473602 FAM236AA0A1B0GUQ0 79 aa6.52□□□□□ -1.37
SHROOM3-204ENST00000473602 FAM236BA0A1B0GV22 79 aa6.52□□□□□ -1.37
SHROOM3-204ENST00000473602 TMEM254Q8TBM7 123 aa6.51□□□□□ -1.37
SHROOM3-204ENST00000473602 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
SHROOM3-204ENST00000473602 SPINK7P58062 85 aa6.5□□□□□ -1.37
SHROOM3-204ENST00000473602 K7EQZ3 153 aa6.49□□□□□ -1.37
SHROOM3-204ENST00000473602 BPY2O14599 106 aa6.49□□□□□ -1.37
SHROOM3-204ENST00000473602 COX7CP15954 63 aa6.49□□□□□ -1.37
SHROOM3-204ENST00000473602 HIST1H4AP62805 103 aaKnown RBP6.49□□□□□ -1.37
SHROOM3-204ENST00000473602 CXCL6P80162 114 aa6.49□□□□□ -1.37
SHROOM3-204ENST00000473602 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
SHROOM3-204ENST00000473602 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
SHROOM3-204ENST00000473602 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
SHROOM3-204ENST00000473602 SERP2Q8N6R1 65 aa6.47□□□□□ -1.37
SHROOM3-204ENST00000473602 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
SHROOM3-204ENST00000473602 NDUFS5O43920 106 aa6.42□□□□□ -1.38
SHROOM3-204ENST00000473602 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
SHROOM3-204ENST00000473602 MT2AP02795 61 aa6.4□□□□□ -1.38
SHROOM3-204ENST00000473602 TMEM258P61165 79 aa6.4□□□□□ -1.38
SHROOM3-204ENST00000473602 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
SHROOM3-204ENST00000473602 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms