RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
PTP4A1-203ENST00000473334 C8orf87E5RJ46 101 aa11.55□□□□□ -0.56
PTP4A1-203ENST00000473334 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
PTP4A1-203ENST00000473334 Q6ZQT0 140 aa11.54□□□□□ -0.56
PTP4A1-203ENST00000473334 J3KT08 172 aa11.53□□□□□ -0.56
PTP4A1-203ENST00000473334 LOC110117498A0A087WWA1 95 aa11.51□□□□□ -0.57
PTP4A1-203ENST00000473334 BATFQ16520 125 aa11.51□□□□□ -0.57
PTP4A1-203ENST00000473334 A0A1B0GW54 56 aa11.49□□□□□ -0.57
PTP4A1-203ENST00000473334 PDE6GP18545 87 aa11.48□□□□□ -0.57
PTP4A1-203ENST00000473334 C14orf132Q9NPU4 83 aa11.45□□□□□ -0.58
PTP4A1-203ENST00000473334 CRCT1Q9UGL9 99 aa11.44□□□□□ -0.58
PTP4A1-203ENST00000473334 LOC105371267A0A1B0GV96 52 aa11.43□□□□□ -0.58
PTP4A1-203ENST00000473334 NDUFB1O75438 58 aa11.43□□□□□ -0.58
PTP4A1-203ENST00000473334 FSIP2Q5CZC0 6907 aa11.38□□□□□ -0.59
PTP4A1-203ENST00000473334 C9orf118A6NHY6 69 aa11.38□□□□□ -0.59
PTP4A1-203ENST00000473334 A8MWP4 228 aa11.38□□□□□ -0.59
PTP4A1-203ENST00000473334 HRES1P13985 223 aa11.38□□□□□ -0.59
PTP4A1-203ENST00000473334 FAM236DA0A1B0GTK5 79 aa11.37□□□□□ -0.59
PTP4A1-203ENST00000473334 FAM236CP0DP71 79 aa11.37□□□□□ -0.59
PTP4A1-203ENST00000473334 MPLKIPQ8TAP9 179 aa11.36□□□□□ -0.59
PTP4A1-203ENST00000473334 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-203ENST00000473334 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
PTP4A1-203ENST00000473334 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
PTP4A1-203ENST00000473334 C8orf17Q9NRJ1 99 aa11.35□□□□□ -0.59
PTP4A1-203ENST00000473334 A0A1W2PPM0 123 aa11.34□□□□□ -0.59
PTP4A1-203ENST00000473334 H3BT86 120 aa11.34□□□□□ -0.59
PTP4A1-203ENST00000473334 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
PTP4A1-203ENST00000473334 IGKV3D-7A0A0C4DH55 119 aa11.33□□□□□ -0.6
PTP4A1-203ENST00000473334 NREPQ16612 68 aa11.32□□□□□ -0.6
PTP4A1-203ENST00000473334 MTURNQ8N3F0 131 aa11.29□□□□□ -0.6
PTP4A1-203ENST00000473334 PRR15Q8IV56 129 aa11.27□□□□□ -0.61
PTP4A1-203ENST00000473334 Q6ZVQ6 151 aa11.25□□□□□ -0.61
PTP4A1-203ENST00000473334 SPINK7P58062 85 aa11.24□□□□□ -0.61
PTP4A1-203ENST00000473334 KRTAP9-8Q9BYQ0 159 aa11.23□□□□□ -0.61
PTP4A1-203ENST00000473334 MMP24-AS1A0A0U1RRL7 71 aa11.19□□□□□ -0.62
PTP4A1-203ENST00000473334 SPCS1Q9Y6A9 102 aa11.19□□□□□ -0.62
PTP4A1-203ENST00000473334 TMEM254Q8TBM7 123 aa11.18□□□□□ -0.62
PTP4A1-203ENST00000473334 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-203ENST00000473334 K7EQZ3 153 aa11.16□□□□□ -0.62
PTP4A1-203ENST00000473334 hDV103S1A0JD37 113 aa11.12□□□□□ -0.63
PTP4A1-203ENST00000473334 BPY2O14599 106 aa11.12□□□□□ -0.63
PTP4A1-203ENST00000473334 COL5A1-AS1Q5SY13 56 aa11.09□□□□□ -0.63
PTP4A1-203ENST00000473334 WFDC13Q8IUB5 93 aa11.09□□□□□ -0.63
PTP4A1-203ENST00000473334 MT2AP02795 61 aa11.08□□□□□ -0.64
PTP4A1-203ENST00000473334 SMCPP49901 116 aaPredicted RBP11.08□□□□□ -0.64
PTP4A1-203ENST00000473334 NDUFS5O43920 106 aa11.06□□□□□ -0.64
PTP4A1-203ENST00000473334 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
PTP4A1-203ENST00000473334 K7EP34 96 aa11□□□□□ -0.65
PTP4A1-203ENST00000473334 MT1FP04733 61 aa10.99□□□□□ -0.65
PTP4A1-203ENST00000473334 Q8N9L7 120 aa10.99□□□□□ -0.65
PTP4A1-203ENST00000473334 CASC2Q6XLA1 102 aa10.96□□□□□ -0.65
PTP4A1-203ENST00000473334 USH2AO75445 5202 aa10.95□□□□□ -0.66
PTP4A1-203ENST00000473334 KRTAP10-10P60014 251 aa10.95□□□□□ -0.66
PTP4A1-203ENST00000473334 UBL5Q9BZL1 73 aa10.94□□□□□ -0.66
PTP4A1-203ENST00000473334 LINC00846Q9NV44 126 aa10.93□□□□□ -0.66
PTP4A1-203ENST00000473334 Q5W150 140 aa10.91□□□□□ -0.66
PTP4A1-203ENST00000473334 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
PTP4A1-203ENST00000473334 HCG22E2RYF7 251 aa10.9□□□□□ -0.66
PTP4A1-203ENST00000473334 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
PTP4A1-203ENST00000473334 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
PTP4A1-203ENST00000473334 KRTAP9-3Q9BYQ3 159 aa10.88□□□□□ -0.67
PTP4A1-203ENST00000473334 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
PTP4A1-203ENST00000473334 H1FX-AS1Q4G0G2 97 aa10.85□□□□□ -0.67
PTP4A1-203ENST00000473334 SSPOA2VEC9 5147 aa10.84□□□□□ -0.67
PTP4A1-203ENST00000473334 CXCL6P80162 114 aa10.83□□□□□ -0.68
PTP4A1-203ENST00000473334 LCE2BO14633 110 aa10.82□□□□□ -0.68
PTP4A1-203ENST00000473334 PCP4L1A6NKN8 68 aa10.8□□□□□ -0.68
PTP4A1-203ENST00000473334 F8W1H4 67 aa10.79□□□□□ -0.68
PTP4A1-203ENST00000473334 ETDBQ3ZM63 59 aa10.74□□□□□ -0.69
PTP4A1-203ENST00000473334 C4orf26Q17RF5 130 aa10.7□□□□□ -0.7
PTP4A1-203ENST00000473334 KRTAP19-1Q8IUB9 90 aa10.64□□□□□ -0.71
PTP4A1-203ENST00000473334 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.63□□□□□ -0.71
PTP4A1-203ENST00000473334 TP53AIP1Q9HCN2 124 aa10.63□□□□□ -0.71
PTP4A1-203ENST00000473334 KRTAP9-7A8MTY7 169 aa10.6□□□□□ -0.71
PTP4A1-203ENST00000473334 FCGBPQ9Y6R7 5405 aaPredicted RBP10.6□□□□□ -0.71
PTP4A1-203ENST00000473334 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
PTP4A1-203ENST00000473334 ACYP1P07311 99 aa10.52□□□□□ -0.73
PTP4A1-203ENST00000473334 C1orf64Q8NEQ6 169 aa10.51□□□□□ -0.73
PTP4A1-203ENST00000473334 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
PTP4A1-203ENST00000473334 S4R3F8 94 aa10.48□□□□□ -0.73
PTP4A1-203ENST00000473334 FAM240AA0A1B0GVK7 77 aa10.47□□□□□ -0.73
PTP4A1-203ENST00000473334 KRTAP19-6Q3LI70 58 aa10.46□□□□□ -0.73
PTP4A1-203ENST00000473334 ATP5EP2Q5VTU8 51 aa10.44□□□□□ -0.74
PTP4A1-203ENST00000473334 TRAV22A0A0B4J277 110 aa10.41□□□□□ -0.74
PTP4A1-203ENST00000473334 LCA10Q71F78 164 aa10.4□□□□□ -0.74
PTP4A1-203ENST00000473334 CYP4F30PQ9H0H9 118 aa10.4□□□□□ -0.74
PTP4A1-203ENST00000473334 CSAG1Q6PB30 78 aa10.38□□□□□ -0.75
PTP4A1-203ENST00000473334 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
PTP4A1-203ENST00000473334 FAM236AA0A1B0GUQ0 79 aa10.36□□□□□ -0.75
PTP4A1-203ENST00000473334 FAM236BA0A1B0GV22 79 aa10.36□□□□□ -0.75
PTP4A1-203ENST00000473334 LOC101927531A0A1B0GV80 90 aa10.35□□□□□ -0.75
PTP4A1-203ENST00000473334 UQCRQO14949 82 aa10.29□□□□□ -0.76
PTP4A1-203ENST00000473334 LINC00643Q86TS7 51 aa10.26□□□□□ -0.77
PTP4A1-203ENST00000473334 H0Y9P7 68 aa10.25□□□□□ -0.77
PTP4A1-203ENST00000473334 ATOX1O00244 68 aa10.24□□□□□ -0.77
PTP4A1-203ENST00000473334 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
PTP4A1-203ENST00000473334 A0A087WVE0 104 aa10.23□□□□□ -0.77
PTP4A1-203ENST00000473334 MACF1Q9UPN3 7388 aaKnown RBP10.23□□□□□ -0.77
PTP4A1-203ENST00000473334 A0A1B0GV90 55 aa10.2□□□□□ -0.78
PTP4A1-203ENST00000473334 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms