RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 FRAS1Q86XX4 4008 aa12.14□□□□□ -0.47
FSCN1-205ENST00000473330 PLAC8Q9NZF1 115 aa12.14□□□□□ -0.47
FSCN1-205ENST00000473330 LOC101927531A0A1B0GV80 90 aa12.13□□□□□ -0.47
FSCN1-205ENST00000473330 Q75L30 129 aa12.11□□□□□ -0.47
FSCN1-205ENST00000473330 PMAIP1Q13794 54 aa12.1□□□□□ -0.47
FSCN1-205ENST00000473330 HRES1P13985 223 aa12.06□□□□□ -0.48
FSCN1-205ENST00000473330 DNAH17Q9UFH2 4485 aa12.06□□□□□ -0.48
FSCN1-205ENST00000473330 SPAG11AQ6PDA7 123 aa12.05□□□□□ -0.48
FSCN1-205ENST00000473330 LCA10Q71F78 164 aa12.04□□□□□ -0.48
FSCN1-205ENST00000473330 SPINK6Q6UWN8 80 aa12.03□□□□□ -0.48
FSCN1-205ENST00000473330 LINC01558Q9Y6Z2 57 aa12.03□□□□□ -0.48
FSCN1-205ENST00000473330 DNAH2Q9P225 4427 aa12.03□□□□□ -0.48
FSCN1-205ENST00000473330 PRKDCP78527 4128 aaKnown RBP12.03□□□□□ -0.48
FSCN1-205ENST00000473330 Q5W150 140 aa12.02□□□□□ -0.48
FSCN1-205ENST00000473330 KMT2AQ03164 3969 aa12.02□□□□□ -0.49
FSCN1-205ENST00000473330 A6NED7 52 aa12.01□□□□□ -0.49
FSCN1-205ENST00000473330 KRTAP13-3Q3SY46 172 aa12□□□□□ -0.49
FSCN1-205ENST00000473330 IGLV7-43P04211 117 aa11.99□□□□□ -0.49
FSCN1-205ENST00000473330 CIRBP-AS1Q8TBR5 109 aa11.98□□□□□ -0.49
FSCN1-205ENST00000473330 SPTSSBQ8NFR3 76 aa11.94□□□□□ -0.5
FSCN1-205ENST00000473330 FBN3Q75N90 2809 aa11.94□□□□□ -0.5
FSCN1-205ENST00000473330 ATP11AUNQ6ZP68 121 aa11.92□□□□□ -0.5
FSCN1-205ENST00000473330 SEC61GP60059 68 aa11.91□□□□□ -0.5
FSCN1-205ENST00000473330 CDC42SE1Q9NRR8 79 aa11.91□□□□□ -0.5
FSCN1-205ENST00000473330 ALMS1Q8TCU4 4167 aa11.9□□□□□ -0.5
FSCN1-205ENST00000473330 C1orf134Q5TEV5 83 aa11.88□□□□□ -0.51
FSCN1-205ENST00000473330 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
FSCN1-205ENST00000473330 C8orf87E5RJ46 101 aa11.87□□□□□ -0.51
FSCN1-205ENST00000473330 PRR26Q8N8Z3 221 aa11.87□□□□□ -0.51
FSCN1-205ENST00000473330 SPINK7P58062 85 aa11.85□□□□□ -0.51
FSCN1-205ENST00000473330 MEGF8Q7Z7M0 2845 aa11.83□□□□□ -0.52
FSCN1-205ENST00000473330 A6NN06 94 aa11.8□□□□□ -0.52
FSCN1-205ENST00000473330 ACYP2P14621 99 aa11.8□□□□□ -0.52
FSCN1-205ENST00000473330 TGP01266 2768 aa11.8□□□□□ -0.52
FSCN1-205ENST00000473330 LINC00313P59037 77 aa11.79□□□□□ -0.52
FSCN1-205ENST00000473330 DNAH11Q96DT5 4516 aa11.79□□□□□ -0.52
FSCN1-205ENST00000473330 KTN1-AS1Q86SY8 53 aa11.78□□□□□ -0.52
FSCN1-205ENST00000473330 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
FSCN1-205ENST00000473330 DMAC1Q96GE9 116 aa11.75□□□□□ -0.53
FSCN1-205ENST00000473330 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
FSCN1-205ENST00000473330 KRTAP13-2Q52LG2 175 aa11.75□□□□□ -0.53
FSCN1-205ENST00000473330 RETNLBQ9BQ08 111 aa11.75□□□□□ -0.53
FSCN1-205ENST00000473330 FAM229AH3BQW9 127 aa11.74□□□□□ -0.53
FSCN1-205ENST00000473330 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
FSCN1-205ENST00000473330 LY6G6CO95867 125 aa11.71□□□□□ -0.53
FSCN1-205ENST00000473330 IGKV2-30P06310 120 aa11.7□□□□□ -0.54
FSCN1-205ENST00000473330 KRTAP16-1A8MUX0 517 aa11.67□□□□□ -0.54
FSCN1-205ENST00000473330 Q6ZSA8 131 aa11.59□□□□□ -0.55
FSCN1-205ENST00000473330 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
FSCN1-205ENST00000473330 KRTAP10-1P60331 282 aa11.59□□□□□ -0.55
FSCN1-205ENST00000473330 KRTAP1-4P0C5Y4 121 aa11.58□□□□□ -0.56
FSCN1-205ENST00000473330 C7orf65Q6ZTY9 151 aa11.57□□□□□ -0.56
FSCN1-205ENST00000473330 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
FSCN1-205ENST00000473330 A0A1B0GU69 56 aa11.55□□□□□ -0.56
FSCN1-205ENST00000473330 PKD1P98161 4303 aa11.53□□□□□ -0.56
FSCN1-205ENST00000473330 IGKV2D-30A0A075B6S6 120 aa11.52□□□□□ -0.57
FSCN1-205ENST00000473330 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
FSCN1-205ENST00000473330 FAT2Q9NYQ8 4349 aa11.44□□□□□ -0.58
FSCN1-205ENST00000473330 SPATA8Q6RVD6 105 aa11.43□□□□□ -0.58
FSCN1-205ENST00000473330 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
FSCN1-205ENST00000473330 C4orf48Q5BLP8 95 aa11.42□□□□□ -0.58
FSCN1-205ENST00000473330 HYDINQ4G0P3 5121 aa11.42□□□□□ -0.58
FSCN1-205ENST00000473330 DNHD1Q96M86 4753 aa11.41□□□□□ -0.58
FSCN1-205ENST00000473330 TYMSOSQ8TAI1 123 aa11.4□□□□□ -0.58
FSCN1-205ENST00000473330 SPINK1P00995 79 aa11.38□□□□□ -0.59
FSCN1-205ENST00000473330 UQCR11O14957 56 aa11.35□□□□□ -0.59
FSCN1-205ENST00000473330 MIR22HGQ0VDD5 57 aa11.35□□□□□ -0.59
FSCN1-205ENST00000473330 Q8N1X5 172 aa11.27□□□□□ -0.61
FSCN1-205ENST00000473330 PRAC1Q96KF2 57 aa11.27□□□□□ -0.61
FSCN1-205ENST00000473330 ADM2Q7Z4H4 148 aa11.25□□□□□ -0.61
FSCN1-205ENST00000473330 LINC00304Q8N9R0 145 aa11.24□□□□□ -0.61
FSCN1-205ENST00000473330 RPS29P62273 56 aaKnown RBP11.21□□□□□ -0.62
FSCN1-205ENST00000473330 SACSQ9NZJ4 4579 aa11.17□□□□□ -0.62
FSCN1-205ENST00000473330 PKHD1P08F94 4074 aa11.1□□□□□ -0.63
FSCN1-205ENST00000473330 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
FSCN1-205ENST00000473330 A8MUU9 505 aa11.08□□□□□ -0.64
FSCN1-205ENST00000473330 C20orf166-AS1Q96NR2 134 aa11.07□□□□□ -0.64
FSCN1-205ENST00000473330 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
FSCN1-205ENST00000473330 KRTAP3-1Q9BYR8 98 aa11.04□□□□□ -0.64
FSCN1-205ENST00000473330 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
FSCN1-205ENST00000473330 DYNC1H1Q14204 4646 aaKnown RBP10.98□□□□□ -0.65
FSCN1-205ENST00000473330 H0YAA0 97 aa10.97□□□□□ -0.65
FSCN1-205ENST00000473330 LINC01554Q52M75 96 aa10.94□□□□□ -0.66
FSCN1-205ENST00000473330 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
FSCN1-205ENST00000473330 APOBP04114 4563 aaKnown RBP10.93□□□□□ -0.66
FSCN1-205ENST00000473330 CSAG1Q6PB30 78 aa10.92□□□□□ -0.66
FSCN1-205ENST00000473330 FAT1Q14517 4588 aa10.9□□□□□ -0.66
FSCN1-205ENST00000473330 A0A1B0GU33 70 aa10.88□□□□□ -0.67
FSCN1-205ENST00000473330 H1FX-AS1Q4G0G2 97 aa10.84□□□□□ -0.67
FSCN1-205ENST00000473330 A0A1B0GVY2 172 aa10.83□□□□□ -0.68
FSCN1-205ENST00000473330 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
FSCN1-205ENST00000473330 FLG2Q5D862 2391 aaPredicted RBP10.7□□□□□ -0.7
FSCN1-205ENST00000473330 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
FSCN1-205ENST00000473330 KRTAP25-1Q3LHN0 102 aa10.61□□□□□ -0.71
FSCN1-205ENST00000473330 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
FSCN1-205ENST00000473330 KRTAP21-3Q3LHN1 58 aa10.55□□□□□ -0.72
FSCN1-205ENST00000473330 TNXBP22105 4242 aa10.55□□□□□ -0.72
FSCN1-205ENST00000473330 RYR2Q92736 4967 aa10.54□□□□□ -0.72
FSCN1-205ENST00000473330 K7ERS5 55 aa10.53□□□□□ -0.72
FSCN1-205ENST00000473330 KRTAP10-6P60371 365 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms