RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PSMB2P49721 201 aa7.76□□□□□ -1.17
VTI1A-203ENST00000472892 K7ERJ3 54 aa7.75□□□□□ -1.17
VTI1A-203ENST00000472892 COX6CP09669 75 aa7.75□□□□□ -1.17
VTI1A-203ENST00000472892 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
VTI1A-203ENST00000472892 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
VTI1A-203ENST00000472892 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
VTI1A-203ENST00000472892 A0A1B0GV72 72 aa7.74□□□□□ -1.17
VTI1A-203ENST00000472892 NOTCH2NLQ7Z3S9 236 aa7.74□□□□□ -1.17
VTI1A-203ENST00000472892 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
VTI1A-203ENST00000472892 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
VTI1A-203ENST00000472892 CCKP06307 115 aa7.72□□□□□ -1.17
VTI1A-203ENST00000472892 UBE2V1Q13404 147 aa7.72□□□□□ -1.17
VTI1A-203ENST00000472892 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
VTI1A-203ENST00000472892 TMA7Q9Y2S6 64 aaKnown RBP7.71□□□□□ -1.18
VTI1A-203ENST00000472892 TRACP01848 142 aa7.7□□□□□ -1.18
VTI1A-203ENST00000472892 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
VTI1A-203ENST00000472892 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
VTI1A-203ENST00000472892 UQCR10Q9UDW1 63 aa7.67□□□□□ -1.18
VTI1A-203ENST00000472892 HRES1P13985 223 aa7.66□□□□□ -1.18
VTI1A-203ENST00000472892 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
VTI1A-203ENST00000472892 USH2AO75445 5202 aa7.65□□□□□ -1.19
VTI1A-203ENST00000472892 FAM236DA0A1B0GTK5 79 aa7.64□□□□□ -1.19
VTI1A-203ENST00000472892 FAM236CP0DP71 79 aa7.64□□□□□ -1.19
VTI1A-203ENST00000472892 SCGB1C2P0DMR2 95 aa7.63□□□□□ -1.19
VTI1A-203ENST00000472892 VPS25Q9BRG1 176 aa7.63□□□□□ -1.19
VTI1A-203ENST00000472892 RBM12B-AS1Q9P1G2 102 aa7.63□□□□□ -1.19
VTI1A-203ENST00000472892 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
VTI1A-203ENST00000472892 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
VTI1A-203ENST00000472892 DSCR8Q96T75 97 aa7.62□□□□□ -1.19
VTI1A-203ENST00000472892 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
VTI1A-203ENST00000472892 MT2AP02795 61 aa7.6□□□□□ -1.19
VTI1A-203ENST00000472892 BAALC-AS2P0C853 105 aa7.59□□□□□ -1.19
VTI1A-203ENST00000472892 J3KT08 172 aa7.58□□□□□ -1.2
VTI1A-203ENST00000472892 C9JAW5 83 aa7.57□□□□□ -1.2
VTI1A-203ENST00000472892 Q6ZQT0 140 aa7.57□□□□□ -1.2
VTI1A-203ENST00000472892 ZCCHC13Q8WW36 166 aaKnown RBP7.55□□□□□ -1.2
VTI1A-203ENST00000472892 MT1FP04733 61 aa7.54□□□□□ -1.2
VTI1A-203ENST00000472892 SPINK7P58062 85 aa7.52□□□□□ -1.21
VTI1A-203ENST00000472892 MTURNQ8N3F0 131 aa7.52□□□□□ -1.21
VTI1A-203ENST00000472892 Q8N9P0 234 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-203ENST00000472892 NDUFB1O75438 58 aa7.51□□□□□ -1.21
VTI1A-203ENST00000472892 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
VTI1A-203ENST00000472892 A0A1B0GW54 56 aa7.5□□□□□ -1.21
VTI1A-203ENST00000472892 KRTAP10-10P60014 251 aa7.5□□□□□ -1.21
VTI1A-203ENST00000472892 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
VTI1A-203ENST00000472892 ATXN8Q156A1 80 aa7.49□□□□□ -1.21
VTI1A-203ENST00000472892 LOC110117498A0A087WWA1 95 aa7.48□□□□□ -1.21
VTI1A-203ENST00000472892 A8MWP4 228 aa7.47□□□□□ -1.21
VTI1A-203ENST00000472892 PDE6GP18545 87 aa7.46□□□□□ -1.22
VTI1A-203ENST00000472892 C8orf17Q9NRJ1 99 aa7.46□□□□□ -1.22
VTI1A-203ENST00000472892 M0R143 59 aa7.45□□□□□ -1.22
VTI1A-203ENST00000472892 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
VTI1A-203ENST00000472892 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
VTI1A-203ENST00000472892 FCGBPQ9Y6R7 5405 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-203ENST00000472892 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
VTI1A-203ENST00000472892 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
VTI1A-203ENST00000472892 Q6ZVQ6 151 aa7.4□□□□□ -1.22
VTI1A-203ENST00000472892 PRR15Q8IV56 129 aa7.4□□□□□ -1.22
VTI1A-203ENST00000472892 WFDC13Q8IUB5 93 aa7.39□□□□□ -1.23
VTI1A-203ENST00000472892 NREPQ16612 68 aa7.37□□□□□ -1.23
VTI1A-203ENST00000472892 TMEM254Q8TBM7 123 aa7.34□□□□□ -1.23
VTI1A-203ENST00000472892 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
VTI1A-203ENST00000472892 MRPL34Q9BQ48 92 aaKnown RBP7.33□□□□□ -1.24
VTI1A-203ENST00000472892 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
VTI1A-203ENST00000472892 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
VTI1A-203ENST00000472892 hDV103S1A0JD37 113 aa7.29□□□□□ -1.24
VTI1A-203ENST00000472892 K7EQZ3 153 aa7.27□□□□□ -1.25
VTI1A-203ENST00000472892 H1FX-AS1Q4G0G2 97 aa7.27□□□□□ -1.25
VTI1A-203ENST00000472892 KRTAP19-6Q3LI70 58 aa7.26□□□□□ -1.25
VTI1A-203ENST00000472892 H3BT86 120 aa7.25□□□□□ -1.25
VTI1A-203ENST00000472892 BATFQ16520 125 aa7.25□□□□□ -1.25
VTI1A-203ENST00000472892 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
VTI1A-203ENST00000472892 NDUFS5O43920 106 aa7.24□□□□□ -1.25
VTI1A-203ENST00000472892 LINC00846Q9NV44 126 aa7.24□□□□□ -1.25
VTI1A-203ENST00000472892 MACF1Q9UPN3 7388 aaKnown RBP7.23□□□□□ -1.25
VTI1A-203ENST00000472892 BPY2O14599 106 aa7.22□□□□□ -1.25
VTI1A-203ENST00000472892 Q5W150 140 aa7.22□□□□□ -1.25
VTI1A-203ENST00000472892 A0A1W2PPM0 123 aa7.2□□□□□ -1.26
VTI1A-203ENST00000472892 TAX1BP3O14907 124 aa7.2□□□□□ -1.26
VTI1A-203ENST00000472892 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
VTI1A-203ENST00000472892 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
VTI1A-203ENST00000472892 IGKV2-30P06310 120 aa7.18□□□□□ -1.26
VTI1A-203ENST00000472892 C7orf65Q6ZTY9 151 aa7.17□□□□□ -1.26
VTI1A-203ENST00000472892 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
VTI1A-203ENST00000472892 Q8N9L7 120 aa7.14□□□□□ -1.27
VTI1A-203ENST00000472892 HCG22E2RYF7 251 aa7.12□□□□□ -1.27
VTI1A-203ENST00000472892 CXCL6P80162 114 aa7.1□□□□□ -1.27
VTI1A-203ENST00000472892 C4orf26Q17RF5 130 aa7.1□□□□□ -1.27
VTI1A-203ENST00000472892 SPCS1Q9Y6A9 102 aa7.08□□□□□ -1.28
VTI1A-203ENST00000472892 LOC105371267A0A1B0GV96 52 aa7.07□□□□□ -1.28
VTI1A-203ENST00000472892 UBL5Q9BZL1 73 aa7.02□□□□□ -1.29
VTI1A-203ENST00000472892 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
VTI1A-203ENST00000472892 PRO0461Q9UI25 63 aa7.01□□□□□ -1.29
VTI1A-203ENST00000472892 C5orf47Q569G3 176 aa7□□□□□ -1.29
VTI1A-203ENST00000472892 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
VTI1A-203ENST00000472892 COL5A1-AS1Q5SY13 56 aa6.95□□□□□ -1.3
VTI1A-203ENST00000472892 C1orf64Q8NEQ6 169 aa6.95□□□□□ -1.3
VTI1A-203ENST00000472892 S4R3F8 94 aa6.95□□□□□ -1.3
VTI1A-203ENST00000472892 K7EP34 96 aa6.94□□□□□ -1.3
VTI1A-203ENST00000472892 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms