RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
LAMP1-203ENST00000472564 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
LAMP1-203ENST00000472564 LOC400499M0QZD8 3231 aa9.93□□□□□ -0.82
LAMP1-203ENST00000472564 DMXL1Q9Y485 3027 aa9.92□□□□□ -0.82
LAMP1-203ENST00000472564 FBN2P35556 2912 aa9.91□□□□□ -0.82
LAMP1-203ENST00000472564 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
LAMP1-203ENST00000472564 R4GN34 69 aa9.9□□□□□ -0.83
LAMP1-203ENST00000472564 CRYBG3Q68DQ2 2970 aa9.89□□□□□ -0.83
LAMP1-203ENST00000472564 TNRC18O15417 2968 aaPredicted RBP9.88□□□□□ -0.83
LAMP1-203ENST00000472564 KRTAP13-1Q8IUC0 172 aa9.88□□□□□ -0.83
LAMP1-203ENST00000472564 HRNRQ86YZ3 2850 aaPredicted RBP9.87□□□□□ -0.83
LAMP1-203ENST00000472564 Q5VSD8 79 aa9.87□□□□□ -0.83
LAMP1-203ENST00000472564 SPATA8Q6RVD6 105 aa9.87□□□□□ -0.83
LAMP1-203ENST00000472564 ROMO1P60602 79 aa9.86□□□□□ -0.83
LAMP1-203ENST00000472564 H3BS24 57 aa9.85□□□□□ -0.83
LAMP1-203ENST00000472564 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
LAMP1-203ENST00000472564 USP34Q70CQ2 3546 aa9.81□□□□□ -0.84
LAMP1-203ENST00000472564 A6NN06 94 aa9.78□□□□□ -0.84
LAMP1-203ENST00000472564 SEC61BP60468 96 aaKnown RBP9.78□□□□□ -0.84
LAMP1-203ENST00000472564 M0R2T5 61 aa9.77□□□□□ -0.84
LAMP1-203ENST00000472564 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
LAMP1-203ENST00000472564 A8MU10 97 aa9.76□□□□□ -0.85
LAMP1-203ENST00000472564 MYO15AQ9UKN7 3530 aa9.74□□□□□ -0.85
LAMP1-203ENST00000472564 M0QZ58 72 aa9.72□□□□□ -0.85
LAMP1-203ENST00000472564 RPS29P62273 56 aaKnown RBP9.7□□□□□ -0.86
LAMP1-203ENST00000472564 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
LAMP1-203ENST00000472564 TENM3Q9P273 2699 aa9.67□□□□□ -0.86
LAMP1-203ENST00000472564 MXRA5Q9NR99 2828 aa9.63□□□□□ -0.87
LAMP1-203ENST00000472564 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
LAMP1-203ENST00000472564 A0A0A0MQY5 61 aa9.54□□□□□ -0.88
LAMP1-203ENST00000472564 CELSR1Q9NYQ6 3014 aa9.49□□□□□ -0.89
LAMP1-203ENST00000472564 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
LAMP1-203ENST00000472564 DCHS1Q96JQ0 3298 aa9.44□□□□□ -0.9
LAMP1-203ENST00000472564 RELNP78509 3460 aa9.42□□□□□ -0.9
LAMP1-203ENST00000472564 A8MUU9 505 aa9.41□□□□□ -0.9
LAMP1-203ENST00000472564 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
LAMP1-203ENST00000472564 WDFY3Q8IZQ1 3526 aa9.35□□□□□ -0.91
LAMP1-203ENST00000472564 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
LAMP1-203ENST00000472564 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
LAMP1-203ENST00000472564 PDZD2O15018 2839 aa9.31□□□□□ -0.92
LAMP1-203ENST00000472564 PKD1L1Q8TDX9 2849 aa9.31□□□□□ -0.92
LAMP1-203ENST00000472564 TGP01266 2768 aa9.28□□□□□ -0.92
LAMP1-203ENST00000472564 TENM2Q9NT68 2774 aa9.22□□□□□ -0.93
LAMP1-203ENST00000472564 NDUFAF8A1L188 74 aa9.19□□□□□ -0.94
LAMP1-203ENST00000472564 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
LAMP1-203ENST00000472564 ZFHX4Q86UP3 3567 aa9.16□□□□□ -0.94
LAMP1-203ENST00000472564 ASPMQ8IZT6 3477 aa9.15□□□□□ -0.94
LAMP1-203ENST00000472564 VWFP04275 2813 aa9.14□□□□□ -0.95
LAMP1-203ENST00000472564 LAMA5O15230 3695 aa9.14□□□□□ -0.95
LAMP1-203ENST00000472564 H0YAA0 97 aa9.13□□□□□ -0.95
LAMP1-203ENST00000472564 FBN1P35555 2871 aaKnown RBP9.12□□□□□ -0.95
LAMP1-203ENST00000472564 XP32Q5T750 250 aa9.09□□□□□ -0.95
LAMP1-203ENST00000472564 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
LAMP1-203ENST00000472564 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
LAMP1-203ENST00000472564 TNP1P09430 55 aa9□□□□□ -0.97
LAMP1-203ENST00000472564 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
LAMP1-203ENST00000472564 CSMD1Q96PZ7 3565 aa8.98□□□□□ -0.97
LAMP1-203ENST00000472564 MUC3AQ02505 3323 aa8.94□□□□□ -0.98
LAMP1-203ENST00000472564 SRRM2Q9UQ35 2752 aaKnown RBP8.9□□□□□ -0.99
LAMP1-203ENST00000472564 OTOGQ6ZRI0 2925 aa8.88□□□□□ -0.99
LAMP1-203ENST00000472564 SMG1Q96Q15 3661 aaKnown RBP8.86□□□□□ -0.99
LAMP1-203ENST00000472564 P0C880 135 aa8.86□□□□□ -0.99
LAMP1-203ENST00000472564 PP632Q6XCG6 107 aa8.84□□□□□ -0.99
LAMP1-203ENST00000472564 TPRXLQ17RH7 258 aa8.83□□□□□ -1
LAMP1-203ENST00000472564 DMDP11532 3685 aa8.82□□□□□ -1
LAMP1-203ENST00000472564 CUBNO60494 3623 aa8.76□□□□□ -1.01
LAMP1-203ENST00000472564 FBN3Q75N90 2809 aa8.75□□□□□ -1.01
LAMP1-203ENST00000472564 SVEP1Q4LDE5 3571 aa8.73□□□□□ -1.01
LAMP1-203ENST00000472564 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
LAMP1-203ENST00000472564 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
LAMP1-203ENST00000472564 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
LAMP1-203ENST00000472564 NBPF19A0A087WUL8 3843 aa8.69□□□□□ -1.02
LAMP1-203ENST00000472564 MEGF8Q7Z7M0 2845 aa8.58□□□□□ -1.04
LAMP1-203ENST00000472564 CSMD2Q7Z408 3487 aa8.54□□□□□ -1.04
LAMP1-203ENST00000472564 COL7A1Q02388 2944 aa8.54□□□□□ -1.04
LAMP1-203ENST00000472564 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
LAMP1-203ENST00000472564 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
LAMP1-203ENST00000472564 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
LAMP1-203ENST00000472564 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
LAMP1-203ENST00000472564 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.06
LAMP1-203ENST00000472564 SPENQ96T58 3664 aaKnown RBP8.39□□□□□ -1.07
LAMP1-203ENST00000472564 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
LAMP1-203ENST00000472564 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
LAMP1-203ENST00000472564 KRTAP13-4Q3LI77 160 aa8.28□□□□□ -1.08
LAMP1-203ENST00000472564 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
LAMP1-203ENST00000472564 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
LAMP1-203ENST00000472564 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
LAMP1-203ENST00000472564 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
LAMP1-203ENST00000472564 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
LAMP1-203ENST00000472564 VPS13CQ709C8 3753 aa7.93□□□□□ -1.14
LAMP1-203ENST00000472564 KRTAP10-4P60372 401 aaPredicted RBP7.88□□□□□ -1.15
LAMP1-203ENST00000472564 HUWE1Q7Z6Z7 4374 aaKnown RBP7.84□□□□□ -1.15
LAMP1-203ENST00000472564 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
LAMP1-203ENST00000472564 CSMD3Q7Z407 3707 aa7.76□□□□□ -1.17
LAMP1-203ENST00000472564 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
LAMP1-203ENST00000472564 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
LAMP1-203ENST00000472564 DNAH5Q8TE73 4624 aa7.49□□□□□ -1.21
LAMP1-203ENST00000472564 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
LAMP1-203ENST00000472564 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
LAMP1-203ENST00000472564 DNAH9Q9NYC9 4486 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms