RNA–Protein interactions for RNA: ENST00000471809.5

IFT27-208, Transcript of intraflagellar transport 27, humanhuman

TSL 5

Gene IFT27, Length 6,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-208ENST00000471809 A0A1B0GVY2 172 aa6.4□□□□□ -1.38
IFT27-208ENST00000471809 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
IFT27-208ENST00000471809 FRYLO94915 3013 aa6.4□□□□□ -1.39
IFT27-208ENST00000471809 ATMQ13315 3056 aa6.39□□□□□ -1.39
IFT27-208ENST00000471809 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
IFT27-208ENST00000471809 LRBAP50851 2863 aa6.38□□□□□ -1.39
IFT27-208ENST00000471809 TACC2O95359 2948 aa6.37□□□□□ -1.39
IFT27-208ENST00000471809 H0YAA0 97 aa6.37□□□□□ -1.39
IFT27-208ENST00000471809 COL6A5A8TX70 2615 aa6.37□□□□□ -1.39
IFT27-208ENST00000471809 UNC79Q9P2D8 2635 aa6.36□□□□□ -1.39
IFT27-208ENST00000471809 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
IFT27-208ENST00000471809 COL12A1Q99715 3063 aa6.3□□□□□ -1.4
IFT27-208ENST00000471809 ADGRG4Q8IZF6 3080 aa6.3□□□□□ -1.4
IFT27-208ENST00000471809 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
IFT27-208ENST00000471809 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
IFT27-208ENST00000471809 P0C880 135 aa6.27□□□□□ -1.41
IFT27-208ENST00000471809 STAB2Q8WWQ8 2551 aa6.25□□□□□ -1.41
IFT27-208ENST00000471809 LOC400499M0QZD8 3231 aa6.24□□□□□ -1.41
IFT27-208ENST00000471809 ZNF292O60281 2723 aa6.24□□□□□ -1.41
IFT27-208ENST00000471809 IGSF10Q6WRI0 2623 aa6.21□□□□□ -1.42
IFT27-208ENST00000471809 UBR5O95071 2799 aaPredicted RBP6.2□□□□□ -1.42
IFT27-208ENST00000471809 ITPR2Q14571 2701 aa6.18□□□□□ -1.42
IFT27-208ENST00000471809 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
IFT27-208ENST00000471809 DCHS1Q96JQ0 3298 aa6.18□□□□□ -1.42
IFT27-208ENST00000471809 APCP25054 2843 aa6.18□□□□□ -1.42
IFT27-208ENST00000471809 ZFHX4Q86UP3 3567 aa6.18□□□□□ -1.42
IFT27-208ENST00000471809 HIVEP1P15822 2718 aa6.16□□□□□ -1.42
IFT27-208ENST00000471809 KMT2BQ9UMN6 2715 aaPredicted RBP6.16□□□□□ -1.42
IFT27-208ENST00000471809 XP32Q5T750 250 aa6.16□□□□□ -1.42
IFT27-208ENST00000471809 ZZEF1O43149 2961 aa6.14□□□□□ -1.43
IFT27-208ENST00000471809 DMXL1Q9Y485 3027 aa6.13□□□□□ -1.43
IFT27-208ENST00000471809 NBEAQ8NFP9 2946 aa6.13□□□□□ -1.43
IFT27-208ENST00000471809 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
IFT27-208ENST00000471809 RELNP78509 3460 aa6.12□□□□□ -1.43
IFT27-208ENST00000471809 LAMA5O15230 3695 aa6.12□□□□□ -1.43
IFT27-208ENST00000471809 NSD1Q96L73 2696 aaPredicted RBP6.11□□□□□ -1.43
IFT27-208ENST00000471809 NBPF19A0A087WUL8 3843 aa6.11□□□□□ -1.43
IFT27-208ENST00000471809 ITPR1Q14643 2758 aa6.09□□□□□ -1.43
IFT27-208ENST00000471809 KRTAP1-4P0C5Y4 121 aa6.08□□□□□ -1.44
IFT27-208ENST00000471809 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
IFT27-208ENST00000471809 TNRC18O15417 2968 aaPredicted RBP6.04□□□□□ -1.44
IFT27-208ENST00000471809 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
IFT27-208ENST00000471809 CSMD1Q96PZ7 3565 aa6.02□□□□□ -1.45
IFT27-208ENST00000471809 DMDP11532 3685 aa6□□□□□ -1.45
IFT27-208ENST00000471809 CELSR2Q9HCU4 2923 aa5.99□□□□□ -1.45
IFT27-208ENST00000471809 TENM4Q6N022 2769 aa5.91□□□□□ -1.46
IFT27-208ENST00000471809 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
IFT27-208ENST00000471809 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.47
IFT27-208ENST00000471809 CUBNO60494 3623 aa5.89□□□□□ -1.47
IFT27-208ENST00000471809 FLNCQ14315 2725 aa5.89□□□□□ -1.47
IFT27-208ENST00000471809 DCHS2Q6V1P9 2916 aa5.88□□□□□ -1.47
IFT27-208ENST00000471809 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
IFT27-208ENST00000471809 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
IFT27-208ENST00000471809 SVEP1Q4LDE5 3571 aa5.83□□□□□ -1.48
IFT27-208ENST00000471809 SPENQ96T58 3664 aaKnown RBP5.82□□□□□ -1.48
IFT27-208ENST00000471809 SMG1Q96Q15 3661 aaKnown RBP5.81□□□□□ -1.48
IFT27-208ENST00000471809 ZFHX3Q15911 3703 aa5.81□□□□□ -1.48
IFT27-208ENST00000471809 CELSR1Q9NYQ6 3014 aa5.78□□□□□ -1.48
IFT27-208ENST00000471809 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
IFT27-208ENST00000471809 FBN2P35556 2912 aa5.76□□□□□ -1.49
IFT27-208ENST00000471809 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
IFT27-208ENST00000471809 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
IFT27-208ENST00000471809 ZANQ9Y493 2812 aa5.73□□□□□ -1.49
IFT27-208ENST00000471809 CSMD2Q7Z408 3487 aa5.73□□□□□ -1.49
IFT27-208ENST00000471809 TENM1Q9UKZ4 2725 aa5.72□□□□□ -1.49
IFT27-208ENST00000471809 TGP01266 2768 aa5.71□□□□□ -1.49
IFT27-208ENST00000471809 PKD1L1Q8TDX9 2849 aa5.71□□□□□ -1.5
IFT27-208ENST00000471809 NIPBLQ6KC79 2804 aaeCLIP5.71□□□□□ -1.5
IFT27-208ENST00000471809 NF1P21359 2839 aa5.7□□□□□ -1.5
IFT27-208ENST00000471809 MUC3AQ02505 3323 aa5.69□□□□□ -1.5
IFT27-208ENST00000471809 VWFP04275 2813 aa5.69□□□□□ -1.5
IFT27-208ENST00000471809 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
IFT27-208ENST00000471809 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
IFT27-208ENST00000471809 HRNRQ86YZ3 2850 aaPredicted RBP5.63□□□□□ -1.51
IFT27-208ENST00000471809 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
IFT27-208ENST00000471809 TENM3Q9P273 2699 aa5.52□□□□□ -1.53
IFT27-208ENST00000471809 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
IFT27-208ENST00000471809 MXRA5Q9NR99 2828 aa5.44□□□□□ -1.54
IFT27-208ENST00000471809 INE1O15225 51 aa5.37□□□□□ -1.55
IFT27-208ENST00000471809 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
IFT27-208ENST00000471809 TRRAPQ9Y4A5 3859 aa5.35□□□□□ -1.55
IFT27-208ENST00000471809 BSNQ9UPA5 3926 aa5.34□□□□□ -1.55
IFT27-208ENST00000471809 PDZD2O15018 2839 aa5.33□□□□□ -1.56
IFT27-208ENST00000471809 CSMD3Q7Z407 3707 aa5.33□□□□□ -1.56
IFT27-208ENST00000471809 VPS13CQ709C8 3753 aa5.33□□□□□ -1.56
IFT27-208ENST00000471809 SRRM2Q9UQ35 2752 aaKnown RBP5.31□□□□□ -1.56
IFT27-208ENST00000471809 ANK3Q12955 4377 aaKnown RBP5.28□□□□□ -1.56
IFT27-208ENST00000471809 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
IFT27-208ENST00000471809 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
IFT27-208ENST00000471809 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
IFT27-208ENST00000471809 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
IFT27-208ENST00000471809 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
IFT27-208ENST00000471809 AKAP9Q99996 3911 aa5.13□□□□□ -1.59
IFT27-208ENST00000471809 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
IFT27-208ENST00000471809 MEGF8Q7Z7M0 2845 aa5.1□□□□□ -1.59
IFT27-208ENST00000471809 OTOGQ6ZRI0 2925 aa5.1□□□□□ -1.59
IFT27-208ENST00000471809 COL7A1Q02388 2944 aa5.09□□□□□ -1.59
IFT27-208ENST00000471809 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
IFT27-208ENST00000471809 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
IFT27-208ENST00000471809 HUWE1Q7Z6Z7 4374 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms