RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
APLF-204ENST00000471727 FAM229BQ4G0N7 80 aa6.29□□□□□ -1.4
APLF-204ENST00000471727 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
APLF-204ENST00000471727 IGHV6-1A0A0B4J1U7 121 aa6.28□□□□□ -1.4
APLF-204ENST00000471727 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
APLF-204ENST00000471727 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
APLF-204ENST00000471727 KRTAP10-1P60331 282 aa6.25□□□□□ -1.41
APLF-204ENST00000471727 NDUFS5O43920 106 aa6.23□□□□□ -1.41
APLF-204ENST00000471727 TGP01266 2768 aa6.23□□□□□ -1.41
APLF-204ENST00000471727 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
APLF-204ENST00000471727 FBN3Q75N90 2809 aa6.23□□□□□ -1.41
APLF-204ENST00000471727 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
APLF-204ENST00000471727 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
APLF-204ENST00000471727 V9GYY9 64 aa6.22□□□□□ -1.41
APLF-204ENST00000471727 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
APLF-204ENST00000471727 Q1T7F1 81 aa6.21□□□□□ -1.41
APLF-204ENST00000471727 LIMD2Q9BT23 127 aa6.21□□□□□ -1.42
APLF-204ENST00000471727 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
APLF-204ENST00000471727 LOC101927531A0A1B0GV80 90 aa6.19□□□□□ -1.42
APLF-204ENST00000471727 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
APLF-204ENST00000471727 PRR4Q16378 134 aa6.18□□□□□ -1.42
APLF-204ENST00000471727 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
APLF-204ENST00000471727 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
APLF-204ENST00000471727 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
APLF-204ENST00000471727 A0A087X002 238 aa6.17□□□□□ -1.42
APLF-204ENST00000471727 LINC00313P59037 77 aa6.17□□□□□ -1.42
APLF-204ENST00000471727 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
APLF-204ENST00000471727 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
APLF-204ENST00000471727 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
APLF-204ENST00000471727 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
APLF-204ENST00000471727 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
APLF-204ENST00000471727 PKD1P98161 4303 aa6.13□□□□□ -1.43
APLF-204ENST00000471727 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
APLF-204ENST00000471727 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
APLF-204ENST00000471727 SPINK1P00995 79 aa6.13□□□□□ -1.43
APLF-204ENST00000471727 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
APLF-204ENST00000471727 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
APLF-204ENST00000471727 PLA2G1BP04054 148 aaKnown RBP6.12□□□□□ -1.43
APLF-204ENST00000471727 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
APLF-204ENST00000471727 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
APLF-204ENST00000471727 COA5Q86WW8 74 aa6.1□□□□□ -1.43
APLF-204ENST00000471727 SPAG11AQ6PDA7 123 aa6.1□□□□□ -1.43
APLF-204ENST00000471727 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.44
APLF-204ENST00000471727 Q5W150 140 aa6.08□□□□□ -1.44
APLF-204ENST00000471727 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
APLF-204ENST00000471727 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
APLF-204ENST00000471727 HYDINQ4G0P3 5121 aa6.05□□□□□ -1.44
APLF-204ENST00000471727 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
APLF-204ENST00000471727 ACYP2P14621 99 aa6.03□□□□□ -1.44
APLF-204ENST00000471727 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
APLF-204ENST00000471727 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
APLF-204ENST00000471727 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
APLF-204ENST00000471727 PSPHP1O15172 72 aa6.02□□□□□ -1.45
APLF-204ENST00000471727 HRES1P13985 223 aa6.02□□□□□ -1.45
APLF-204ENST00000471727 A8MUN3 132 aa6.01□□□□□ -1.45
APLF-204ENST00000471727 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
APLF-204ENST00000471727 Q5VV11 94 aa5.99□□□□□ -1.45
APLF-204ENST00000471727 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
APLF-204ENST00000471727 SACSQ9NZJ4 4579 aa5.98□□□□□ -1.45
APLF-204ENST00000471727 PRR26Q8N8Z3 221 aa5.98□□□□□ -1.45
APLF-204ENST00000471727 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
APLF-204ENST00000471727 XP32Q5T750 250 aa5.97□□□□□ -1.45
APLF-204ENST00000471727 Q75L30 129 aa5.97□□□□□ -1.45
APLF-204ENST00000471727 DYNC1H1Q14204 4646 aaKnown RBP5.95□□□□□ -1.46
APLF-204ENST00000471727 CHKB-CPT1BH3BT56 60 aa5.95□□□□□ -1.46
APLF-204ENST00000471727 SMR3BP02814 79 aaPredicted RBP5.94□□□□□ -1.46
APLF-204ENST00000471727 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
APLF-204ENST00000471727 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
APLF-204ENST00000471727 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.46
APLF-204ENST00000471727 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.46
APLF-204ENST00000471727 PKHD1P08F94 4074 aa5.88□□□□□ -1.47
APLF-204ENST00000471727 A6NED7 52 aa5.87□□□□□ -1.47
APLF-204ENST00000471727 A8MUU9 505 aa5.87□□□□□ -1.47
APLF-204ENST00000471727 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
APLF-204ENST00000471727 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
APLF-204ENST00000471727 APOBP04114 4563 aaKnown RBP5.85□□□□□ -1.47
APLF-204ENST00000471727 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
APLF-204ENST00000471727 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
APLF-204ENST00000471727 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
APLF-204ENST00000471727 RYR2Q92736 4967 aa5.82□□□□□ -1.48
APLF-204ENST00000471727 LCA10Q71F78 164 aa5.8□□□□□ -1.48
APLF-204ENST00000471727 A0A1B0GU69 56 aa5.79□□□□□ -1.48
APLF-204ENST00000471727 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
APLF-204ENST00000471727 C9orf92A6NGG3 77 aa5.77□□□□□ -1.48
APLF-204ENST00000471727 FAT1Q14517 4588 aa5.77□□□□□ -1.49
APLF-204ENST00000471727 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
APLF-204ENST00000471727 SPINK7P58062 85 aa5.75□□□□□ -1.49
APLF-204ENST00000471727 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
APLF-204ENST00000471727 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
APLF-204ENST00000471727 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
APLF-204ENST00000471727 A8MU10 97 aa5.72□□□□□ -1.49
APLF-204ENST00000471727 Q5VSD8 79 aa5.72□□□□□ -1.49
APLF-204ENST00000471727 Q8N1X5 172 aa5.71□□□□□ -1.5
APLF-204ENST00000471727 UQCR11O14957 56 aa5.7□□□□□ -1.5
APLF-204ENST00000471727 SEC61GP60059 68 aa5.7□□□□□ -1.5
APLF-204ENST00000471727 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
APLF-204ENST00000471727 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
APLF-204ENST00000471727 A6NN06 94 aa5.66□□□□□ -1.5
APLF-204ENST00000471727 FLG2Q5D862 2391 aaPredicted RBP5.66□□□□□ -1.5
APLF-204ENST00000471727 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms