RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 SMIM26A0A096LP01 95 aa10.94□□□□□ -0.66
COL20A1-205ENST00000471582 PKHD1P08F94 4074 aa10.94□□□□□ -0.66
COL20A1-205ENST00000471582 A0A1B0GVY2 172 aa10.94□□□□□ -0.66
COL20A1-205ENST00000471582 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
COL20A1-205ENST00000471582 FAM229BQ4G0N7 80 aa10.93□□□□□ -0.66
COL20A1-205ENST00000471582 CYP4F30PQ9H0H9 118 aa10.89□□□□□ -0.67
COL20A1-205ENST00000471582 LRP1BQ9NZR2 4599 aa10.88□□□□□ -0.67
COL20A1-205ENST00000471582 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
COL20A1-205ENST00000471582 A0A087X002 238 aa10.86□□□□□ -0.67
COL20A1-205ENST00000471582 MRPL34Q9BQ48 92 aaKnown RBP10.86□□□□□ -0.67
COL20A1-205ENST00000471582 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
COL20A1-205ENST00000471582 SPANXA2-OT1Q8N9U9 137 aa10.86□□□□□ -0.67
COL20A1-205ENST00000471582 FP248Q71RG6 208 aaPredicted RBP10.85□□□□□ -0.67
COL20A1-205ENST00000471582 C4orf26Q17RF5 130 aa10.83□□□□□ -0.68
COL20A1-205ENST00000471582 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
COL20A1-205ENST00000471582 KRTAP1-4P0C5Y4 121 aa10.82□□□□□ -0.68
COL20A1-205ENST00000471582 NOTCH2NLQ7Z3S9 236 aa10.81□□□□□ -0.68
COL20A1-205ENST00000471582 C8orf87E5RJ46 101 aa10.79□□□□□ -0.68
COL20A1-205ENST00000471582 NDUFS5O43920 106 aa10.79□□□□□ -0.68
COL20A1-205ENST00000471582 DYNC1H1Q14204 4646 aaKnown RBP10.76□□□□□ -0.69
COL20A1-205ENST00000471582 VPS13BQ7Z7G8 4022 aa10.75□□□□□ -0.69
COL20A1-205ENST00000471582 PRR4Q16378 134 aa10.75□□□□□ -0.69
COL20A1-205ENST00000471582 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
COL20A1-205ENST00000471582 C1orf195Q5TG92 126 aa10.72□□□□□ -0.69
COL20A1-205ENST00000471582 PLA2G1BP04054 148 aaKnown RBP10.7□□□□□ -0.7
COL20A1-205ENST00000471582 IGLV7-46A0A075B6I9 117 aa10.69□□□□□ -0.7
COL20A1-205ENST00000471582 LINC00313P59037 77 aa10.66□□□□□ -0.7
COL20A1-205ENST00000471582 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
COL20A1-205ENST00000471582 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
COL20A1-205ENST00000471582 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
COL20A1-205ENST00000471582 LOC101927531A0A1B0GV80 90 aa10.65□□□□□ -0.7
COL20A1-205ENST00000471582 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
COL20A1-205ENST00000471582 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
COL20A1-205ENST00000471582 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
COL20A1-205ENST00000471582 SPINK1P00995 79 aa10.63□□□□□ -0.71
COL20A1-205ENST00000471582 PCOTHQ58A44 107 aa10.63□□□□□ -0.71
COL20A1-205ENST00000471582 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
COL20A1-205ENST00000471582 Q1T7F1 81 aa10.62□□□□□ -0.71
COL20A1-205ENST00000471582 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
COL20A1-205ENST00000471582 Q5W150 140 aa10.61□□□□□ -0.71
COL20A1-205ENST00000471582 PRO0628Q9UI54 55 aa10.61□□□□□ -0.71
COL20A1-205ENST00000471582 RPS29P62273 56 aaKnown RBP10.58□□□□□ -0.72
COL20A1-205ENST00000471582 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
COL20A1-205ENST00000471582 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
COL20A1-205ENST00000471582 SPAG11AQ6PDA7 123 aa10.54□□□□□ -0.72
COL20A1-205ENST00000471582 V9GYY9 64 aa10.53□□□□□ -0.72
COL20A1-205ENST00000471582 COA5Q86WW8 74 aa10.52□□□□□ -0.72
COL20A1-205ENST00000471582 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.72
COL20A1-205ENST00000471582 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
COL20A1-205ENST00000471582 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
COL20A1-205ENST00000471582 FAT1Q14517 4588 aa10.49□□□□□ -0.73
COL20A1-205ENST00000471582 RYR1P21817 5038 aa10.47□□□□□ -0.73
COL20A1-205ENST00000471582 KIAA1109Q2LD37 5005 aa10.46□□□□□ -0.73
COL20A1-205ENST00000471582 HSPG2P98160 4391 aa10.46□□□□□ -0.73
COL20A1-205ENST00000471582 IGKV2-30P06310 120 aa10.43□□□□□ -0.74
COL20A1-205ENST00000471582 HRES1P13985 223 aa10.41□□□□□ -0.74
COL20A1-205ENST00000471582 PSPHP1O15172 72 aa10.38□□□□□ -0.75
COL20A1-205ENST00000471582 Q5VSD8 79 aa10.37□□□□□ -0.75
COL20A1-205ENST00000471582 RETNLBQ9BQ08 111 aa10.37□□□□□ -0.75
COL20A1-205ENST00000471582 BRK1Q8WUW1 75 aa10.35□□□□□ -0.75
COL20A1-205ENST00000471582 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
COL20A1-205ENST00000471582 DMAC1Q96GE9 116 aa10.35□□□□□ -0.75
COL20A1-205ENST00000471582 A8MUN3 132 aa10.34□□□□□ -0.75
COL20A1-205ENST00000471582 ACYP2P14621 99 aa10.33□□□□□ -0.76
COL20A1-205ENST00000471582 Q5VV11 94 aa10.31□□□□□ -0.76
COL20A1-205ENST00000471582 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
COL20A1-205ENST00000471582 BIRC6Q9NR09 4857 aa10.29□□□□□ -0.76
COL20A1-205ENST00000471582 PRR15LQ9BU68 103 aa10.27□□□□□ -0.76
COL20A1-205ENST00000471582 LINC01558Q9Y6Z2 57 aa10.27□□□□□ -0.77
COL20A1-205ENST00000471582 Q8N1X5 172 aa10.26□□□□□ -0.77
COL20A1-205ENST00000471582 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
COL20A1-205ENST00000471582 Q75L30 129 aa10.23□□□□□ -0.77
COL20A1-205ENST00000471582 C20orf166-AS1Q96NR2 134 aa10.21□□□□□ -0.77
COL20A1-205ENST00000471582 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
COL20A1-205ENST00000471582 A8MUU9 505 aa10.19□□□□□ -0.78
COL20A1-205ENST00000471582 CHKB-CPT1BH3BT56 60 aa10.18□□□□□ -0.78
COL20A1-205ENST00000471582 SEC61GP60059 68 aa10.17□□□□□ -0.78
COL20A1-205ENST00000471582 C9orf92A6NGG3 77 aa10.15□□□□□ -0.79
COL20A1-205ENST00000471582 KRTAP10-8P60410 259 aa10.13□□□□□ -0.79
COL20A1-205ENST00000471582 HERC2O95714 4834 aa10.11□□□□□ -0.79
COL20A1-205ENST00000471582 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
COL20A1-205ENST00000471582 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
COL20A1-205ENST00000471582 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
COL20A1-205ENST00000471582 KRTAP4-5Q9BYR2 181 aa10.08□□□□□ -0.8
COL20A1-205ENST00000471582 A6NED7 52 aa10.06□□□□□ -0.8
COL20A1-205ENST00000471582 ABCA13Q86UQ4 5058 aa10.03□□□□□ -0.8
COL20A1-205ENST00000471582 TNXBP22105 4242 aa10.03□□□□□ -0.8
COL20A1-205ENST00000471582 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.81
COL20A1-205ENST00000471582 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
COL20A1-205ENST00000471582 LCA10Q71F78 164 aa9.98□□□□□ -0.81
COL20A1-205ENST00000471582 CDC42SE1Q9NRR8 79 aa9.98□□□□□ -0.81
COL20A1-205ENST00000471582 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
COL20A1-205ENST00000471582 A8MU10 97 aa9.96□□□□□ -0.81
COL20A1-205ENST00000471582 SPINK7P58062 85 aa9.94□□□□□ -0.82
COL20A1-205ENST00000471582 A0A1B0GU69 56 aa9.94□□□□□ -0.82
COL20A1-205ENST00000471582 ATP11AUNQ6ZP68 121 aa9.9□□□□□ -0.82
COL20A1-205ENST00000471582 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
COL20A1-205ENST00000471582 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
COL20A1-205ENST00000471582 KRTAP3-1Q9BYR8 98 aa9.84□□□□□ -0.83
COL20A1-205ENST00000471582 PCLOQ9Y6V0 5065 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms