RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 LCE2BO14633 110 aa6.84□□□□□ -1.31
LINC00880-201ENST00000471357 C1orf195Q5TG92 126 aa6.84□□□□□ -1.31
LINC00880-201ENST00000471357 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
LINC00880-201ENST00000471357 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
LINC00880-201ENST00000471357 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
LINC00880-201ENST00000471357 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
LINC00880-201ENST00000471357 IGHV6-1A0A0B4J1U7 121 aa6.78□□□□□ -1.32
LINC00880-201ENST00000471357 ATOX1O00244 68 aa6.78□□□□□ -1.32
LINC00880-201ENST00000471357 HERC2O95714 4834 aa6.77□□□□□ -1.33
LINC00880-201ENST00000471357 OXTP01178 125 aa6.77□□□□□ -1.33
LINC00880-201ENST00000471357 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
LINC00880-201ENST00000471357 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
LINC00880-201ENST00000471357 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
LINC00880-201ENST00000471357 ANAPC13Q9BS18 74 aa6.76□□□□□ -1.33
LINC00880-201ENST00000471357 C8orf17Q9NRJ1 99 aa6.76□□□□□ -1.33
LINC00880-201ENST00000471357 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
LINC00880-201ENST00000471357 CASC2Q6XLA1 102 aa6.75□□□□□ -1.33
LINC00880-201ENST00000471357 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
LINC00880-201ENST00000471357 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
LINC00880-201ENST00000471357 ABCA13Q86UQ4 5058 aa6.73□□□□□ -1.33
LINC00880-201ENST00000471357 C8orf87E5RJ46 101 aa6.72□□□□□ -1.33
LINC00880-201ENST00000471357 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
LINC00880-201ENST00000471357 SMIM20Q8N5G0 67 aa6.71□□□□□ -1.33
LINC00880-201ENST00000471357 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.34
LINC00880-201ENST00000471357 LINC00313P59037 77 aa6.71□□□□□ -1.34
LINC00880-201ENST00000471357 RETNLBQ9BQ08 111 aa6.71□□□□□ -1.34
LINC00880-201ENST00000471357 SERP2Q8N6R1 65 aa6.69□□□□□ -1.34
LINC00880-201ENST00000471357 TRAV7A0A075B6U4 112 aa6.68□□□□□ -1.34
LINC00880-201ENST00000471357 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
LINC00880-201ENST00000471357 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
LINC00880-201ENST00000471357 MRPL34Q9BQ48 92 aaKnown RBP6.67□□□□□ -1.34
LINC00880-201ENST00000471357 COX7CP15954 63 aa6.66□□□□□ -1.34
LINC00880-201ENST00000471357 UQCRQO14949 82 aa6.63□□□□□ -1.35
LINC00880-201ENST00000471357 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
LINC00880-201ENST00000471357 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
LINC00880-201ENST00000471357 NDUFS5O43920 106 aa6.62□□□□□ -1.35
LINC00880-201ENST00000471357 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
LINC00880-201ENST00000471357 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
LINC00880-201ENST00000471357 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
LINC00880-201ENST00000471357 C9orf92A6NGG3 77 aa6.59□□□□□ -1.35
LINC00880-201ENST00000471357 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
LINC00880-201ENST00000471357 C5orf47Q569G3 176 aa6.58□□□□□ -1.36
LINC00880-201ENST00000471357 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
LINC00880-201ENST00000471357 PRR4Q16378 134 aa6.55□□□□□ -1.36
LINC00880-201ENST00000471357 TRAV22A0A0B4J277 110 aa6.54□□□□□ -1.36
LINC00880-201ENST00000471357 MP68P56378 58 aa6.54□□□□□ -1.36
LINC00880-201ENST00000471357 H0Y9P7 68 aa6.54□□□□□ -1.36
LINC00880-201ENST00000471357 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
LINC00880-201ENST00000471357 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
LINC00880-201ENST00000471357 A0A0U1RQV1 116 aa6.52□□□□□ -1.37
LINC00880-201ENST00000471357 KLKP1Q107X0 134 aa6.52□□□□□ -1.37
LINC00880-201ENST00000471357 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
LINC00880-201ENST00000471357 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
LINC00880-201ENST00000471357 A8MUU9 505 aa6.51□□□□□ -1.37
LINC00880-201ENST00000471357 KRTAP13-3Q3SY46 172 aa6.51□□□□□ -1.37
LINC00880-201ENST00000471357 Q5W150 140 aa6.51□□□□□ -1.37
LINC00880-201ENST00000471357 H3BPC8 53 aa6.5□□□□□ -1.37
LINC00880-201ENST00000471357 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
LINC00880-201ENST00000471357 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
LINC00880-201ENST00000471357 Q75L30 129 aa6.47□□□□□ -1.37
LINC00880-201ENST00000471357 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
LINC00880-201ENST00000471357 ZCCHC13Q8WW36 166 aaKnown RBP6.47□□□□□ -1.37
LINC00880-201ENST00000471357 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
LINC00880-201ENST00000471357 XP32Q5T750 250 aa6.45□□□□□ -1.38
LINC00880-201ENST00000471357 NDUFC1O43677 76 aa6.44□□□□□ -1.38
LINC00880-201ENST00000471357 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
LINC00880-201ENST00000471357 H7BZZ5 65 aa6.42□□□□□ -1.38
LINC00880-201ENST00000471357 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
LINC00880-201ENST00000471357 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
LINC00880-201ENST00000471357 ATP11AUNQ6ZP68 121 aa6.39□□□□□ -1.39
LINC00880-201ENST00000471357 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
LINC00880-201ENST00000471357 LPAP08519 4548 aa6.37□□□□□ -1.39
LINC00880-201ENST00000471357 IGKV2D-30A0A075B6S6 120 aa6.37□□□□□ -1.39
LINC00880-201ENST00000471357 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
LINC00880-201ENST00000471357 TMEM258P61165 79 aa6.36□□□□□ -1.39
LINC00880-201ENST00000471357 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
LINC00880-201ENST00000471357 C7orf65Q6ZTY9 151 aa6.34□□□□□ -1.39
LINC00880-201ENST00000471357 HERC1Q15751 4861 aa6.32□□□□□ -1.4
LINC00880-201ENST00000471357 LRP2P98164 4655 aa6.32□□□□□ -1.4
LINC00880-201ENST00000471357 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
LINC00880-201ENST00000471357 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
LINC00880-201ENST00000471357 SPINK7P58062 85 aa6.3□□□□□ -1.4
LINC00880-201ENST00000471357 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
LINC00880-201ENST00000471357 HRES1P13985 223 aa6.28□□□□□ -1.4
LINC00880-201ENST00000471357 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
LINC00880-201ENST00000471357 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
LINC00880-201ENST00000471357 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
LINC00880-201ENST00000471357 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
LINC00880-201ENST00000471357 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
LINC00880-201ENST00000471357 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
LINC00880-201ENST00000471357 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
LINC00880-201ENST00000471357 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
LINC00880-201ENST00000471357 ACYP2P14621 99 aa6.15□□□□□ -1.43
LINC00880-201ENST00000471357 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
LINC00880-201ENST00000471357 A8MUN3 132 aa6.13□□□□□ -1.43
LINC00880-201ENST00000471357 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
LINC00880-201ENST00000471357 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
LINC00880-201ENST00000471357 COA5Q86WW8 74 aa6.11□□□□□ -1.43
LINC00880-201ENST00000471357 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
LINC00880-201ENST00000471357 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms