RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 MMP24-AS1A0A0U1RRL7 71 aa14.79□□□□□ -0.04
U2AF1-208ENST00000471250 IGHV6-1A0A0B4J1U7 121 aa14.77□□□□□ -0.04
U2AF1-208ENST00000471250 COX7CP15954 63 aa14.77□□□□□ -0.04
U2AF1-208ENST00000471250 TRAV7A0A075B6U4 112 aa14.77□□□□□ -0.05
U2AF1-208ENST00000471250 KRTAP10-8P60410 259 aa14.77□□□□□ -0.05
U2AF1-208ENST00000471250 CASC2Q6XLA1 102 aa14.77□□□□□ -0.05
U2AF1-208ENST00000471250 C8orf17Q9NRJ1 99 aa14.77□□□□□ -0.05
U2AF1-208ENST00000471250 UQCRQO14949 82 aa14.72□□□□□ -0.05
U2AF1-208ENST00000471250 OCR1Q9BZK8 76 aa14.72□□□□□ -0.05
U2AF1-208ENST00000471250 CCDC179H3BU77 68 aa14.71□□□□□ -0.05
U2AF1-208ENST00000471250 hDV103S1A0JD37 113 aa14.71□□□□□ -0.06
U2AF1-208ENST00000471250 NOTCH2NLQ7Z3S9 236 aa14.68□□□□□ -0.06
U2AF1-208ENST00000471250 C8orf87E5RJ46 101 aa14.66□□□□□ -0.06
U2AF1-208ENST00000471250 TMEM254Q8TBM7 123 aa14.61□□□□□ -0.07
U2AF1-208ENST00000471250 FAT3Q8TDW7 4589 aa14.61□□□□□ -0.07
U2AF1-208ENST00000471250 LRP1Q07954 4544 aaKnown RBP14.61□□□□□ -0.07
U2AF1-208ENST00000471250 TNXBP22105 4242 aa14.6□□□□□ -0.07
U2AF1-208ENST00000471250 LINC00313P59037 77 aa14.58□□□□□ -0.07
U2AF1-208ENST00000471250 MRPL34Q9BQ48 92 aaKnown RBP14.58□□□□□ -0.07
U2AF1-208ENST00000471250 KRTAP4-5Q9BYR2 181 aa14.55□□□□□ -0.08
U2AF1-208ENST00000471250 MT1HL1P0DM35 61 aa14.54□□□□□ -0.08
U2AF1-208ENST00000471250 C20orf197Q8N268 126 aa14.51□□□□□ -0.09
U2AF1-208ENST00000471250 FLG2Q5D862 2391 aaPredicted RBP14.51□□□□□ -0.09
U2AF1-208ENST00000471250 OXTP01178 125 aa14.49□□□□□ -0.09
U2AF1-208ENST00000471250 BIRC6Q9NR09 4857 aa14.49□□□□□ -0.09
U2AF1-208ENST00000471250 C5orf47Q569G3 176 aa14.47□□□□□ -0.09
U2AF1-208ENST00000471250 TP53AIP1Q9HCN2 124 aa14.47□□□□□ -0.09
U2AF1-208ENST00000471250 RETNLBQ9BQ08 111 aa14.46□□□□□ -0.09
U2AF1-208ENST00000471250 KRTAP16-1A8MUX0 517 aa14.46□□□□□ -0.1
U2AF1-208ENST00000471250 NDUFS5O43920 106 aa14.45□□□□□ -0.1
U2AF1-208ENST00000471250 KLKP1Q107X0 134 aa14.42□□□□□ -0.1
U2AF1-208ENST00000471250 A0A0U1RQV1 116 aa14.41□□□□□ -0.1
U2AF1-208ENST00000471250 Q8N9P0 234 aaPredicted RBP14.4□□□□□ -0.1
U2AF1-208ENST00000471250 CYSTM1Q9H1C7 97 aa14.4□□□□□ -0.1
U2AF1-208ENST00000471250 SNURFQ9Y675 71 aa14.39□□□□□ -0.11
U2AF1-208ENST00000471250 MP68P56378 58 aa14.36□□□□□ -0.11
U2AF1-208ENST00000471250 H0Y9P7 68 aa14.35□□□□□ -0.11
U2AF1-208ENST00000471250 TRAV22A0A0B4J277 110 aa14.34□□□□□ -0.11
U2AF1-208ENST00000471250 MYCBP2O75592 4640 aa14.33□□□□□ -0.11
U2AF1-208ENST00000471250 FP248Q71RG6 208 aaPredicted RBP14.32□□□□□ -0.12
U2AF1-208ENST00000471250 HERC2O95714 4834 aa14.31□□□□□ -0.12
U2AF1-208ENST00000471250 H3BPC8 53 aa14.3□□□□□ -0.12
U2AF1-208ENST00000471250 ZCCHC13Q8WW36 166 aaKnown RBP14.3□□□□□ -0.12
U2AF1-208ENST00000471250 C9orf92A6NGG3 77 aa14.27□□□□□ -0.12
U2AF1-208ENST00000471250 LINC00208Q96KT6 92 aa14.26□□□□□ -0.13
U2AF1-208ENST00000471250 DMBT1Q9UGM3 2413 aaPredicted RBP14.26□□□□□ -0.13
U2AF1-208ENST00000471250 NDUFC1O43677 76 aa14.25□□□□□ -0.13
U2AF1-208ENST00000471250 Q5W150 140 aa14.24□□□□□ -0.13
U2AF1-208ENST00000471250 H7BZZ5 65 aa14.23□□□□□ -0.13
U2AF1-208ENST00000471250 KRTAP13-3Q3SY46 172 aa14.23□□□□□ -0.13
U2AF1-208ENST00000471250 C1orf64Q8NEQ6 169 aa14.21□□□□□ -0.13
U2AF1-208ENST00000471250 ABCA13Q86UQ4 5058 aa14.19□□□□□ -0.14
U2AF1-208ENST00000471250 IGLV7-46A0A075B6I9 117 aa14.17□□□□□ -0.14
U2AF1-208ENST00000471250 C20orf166-AS1Q96NR2 134 aa14.17□□□□□ -0.14
U2AF1-208ENST00000471250 TMEM258P61165 79 aa14.16□□□□□ -0.14
U2AF1-208ENST00000471250 A8MUU9 505 aa14.15□□□□□ -0.14
U2AF1-208ENST00000471250 LOC101927531A0A1B0GV80 90 aa14.07□□□□□ -0.16
U2AF1-208ENST00000471250 J3QL48 77 aa14.07□□□□□ -0.16
U2AF1-208ENST00000471250 PRR4Q16378 134 aa14.07□□□□□ -0.16
U2AF1-208ENST00000471250 Q75L30 129 aa14.04□□□□□ -0.16
U2AF1-208ENST00000471250 FAM236DA0A1B0GTK5 79 aa14.01□□□□□ -0.17
U2AF1-208ENST00000471250 FAM236CP0DP71 79 aa14.01□□□□□ -0.17
U2AF1-208ENST00000471250 IGKV2-30P06310 120 aa13.98□□□□□ -0.17
U2AF1-208ENST00000471250 CYP4F30PQ9H0H9 118 aa13.98□□□□□ -0.17
U2AF1-208ENST00000471250 PCOTHQ58A44 107 aa13.96□□□□□ -0.17
U2AF1-208ENST00000471250 ATP5EP56381 51 aaPredicted RBP13.95□□□□□ -0.18
U2AF1-208ENST00000471250 XP32Q5T750 250 aa13.95□□□□□ -0.18
U2AF1-208ENST00000471250 TPRXLQ17RH7 258 aa13.91□□□□□ -0.18
U2AF1-208ENST00000471250 SPANXA2-OT1Q8N9U9 137 aa13.9□□□□□ -0.18
U2AF1-208ENST00000471250 RPL37P61927 97 aaKnown RBP13.88□□□□□ -0.19
U2AF1-208ENST00000471250 IGKV2D-30A0A075B6S6 120 aa13.87□□□□□ -0.19
U2AF1-208ENST00000471250 ATP11AUNQ6ZP68 121 aa13.82□□□□□ -0.2
U2AF1-208ENST00000471250 C7orf65Q6ZTY9 151 aa13.82□□□□□ -0.2
U2AF1-208ENST00000471250 HRES1P13985 223 aa13.76□□□□□ -0.21
U2AF1-208ENST00000471250 SERP1Q9Y6X1 66 aa13.73□□□□□ -0.21
U2AF1-208ENST00000471250 RPS28P62857 69 aaKnown RBP13.72□□□□□ -0.21
U2AF1-208ENST00000471250 SPINK7P58062 85 aa13.69□□□□□ -0.22
U2AF1-208ENST00000471250 PCLOQ9Y6V0 5065 aa13.64□□□□□ -0.23
U2AF1-208ENST00000471250 LPAP08519 4548 aa13.57□□□□□ -0.24
U2AF1-208ENST00000471250 DMAC1Q96GE9 116 aa13.56□□□□□ -0.24
U2AF1-208ENST00000471250 LRP2P98164 4655 aa13.5□□□□□ -0.25
U2AF1-208ENST00000471250 C4orf26Q17RF5 130 aa13.5□□□□□ -0.25
U2AF1-208ENST00000471250 ACYP2P14621 99 aa13.49□□□□□ -0.25
U2AF1-208ENST00000471250 COA5Q86WW8 74 aa13.48□□□□□ -0.25
U2AF1-208ENST00000471250 SEC61BP60468 96 aaKnown RBP13.44□□□□□ -0.26
U2AF1-208ENST00000471250 A8MUN3 132 aa13.4□□□□□ -0.26
U2AF1-208ENST00000471250 SMIM26A0A096LP01 95 aa13.37□□□□□ -0.27
U2AF1-208ENST00000471250 COX6B2Q6YFQ2 88 aa13.36□□□□□ -0.27
U2AF1-208ENST00000471250 KRTAP3-1Q9BYR8 98 aa13.35□□□□□ -0.27
U2AF1-208ENST00000471250 HERC1Q15751 4861 aa13.29□□□□□ -0.28
U2AF1-208ENST00000471250 CHKB-CPT1BH3BT56 60 aa13.25□□□□□ -0.29
U2AF1-208ENST00000471250 HMCN2Q8NDA2 5059 aa13.25□□□□□ -0.29
U2AF1-208ENST00000471250 MUC17Q685J3 4493 aa13.24□□□□□ -0.29
U2AF1-208ENST00000471250 MPLKIPQ8TAP9 179 aa13.21□□□□□ -0.29
U2AF1-208ENST00000471250 KRTAP4-1Q9BYQ7 146 aa13.16□□□□□ -0.3
U2AF1-208ENST00000471250 RBM12B-AS1Q9P1G2 102 aa13.12□□□□□ -0.31
U2AF1-208ENST00000471250 Q1T7F1 81 aa13.11□□□□□ -0.31
U2AF1-208ENST00000471250 V9GYY9 64 aa13.05□□□□□ -0.32
U2AF1-208ENST00000471250 H1FX-AS1Q4G0G2 97 aa13.02□□□□□ -0.32
U2AF1-208ENST00000471250 SPTSSBQ8NFR3 76 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms