RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 OTOGQ6ZRI0 2925 aa0.92□□□□□ -2.26
PRPF40A-206ENST00000471167 NAV2Q8IVL1 2488 aa0.91□□□□□ -2.26
PRPF40A-206ENST00000471167 UBR5O95071 2799 aaPredicted RBP0.91□□□□□ -2.26
PRPF40A-206ENST00000471167 COL6A5A8TX70 2615 aa0.91□□□□□ -2.26
PRPF40A-206ENST00000471167 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
PRPF40A-206ENST00000471167 APCP25054 2843 aa0.9□□□□□ -2.26
PRPF40A-206ENST00000471167 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
PRPF40A-206ENST00000471167 FAT2Q9NYQ8 4349 aa0.89□□□□□ -2.27
PRPF40A-206ENST00000471167 DEFB110Q30KQ9 67 aa0.89□□□□□ -2.27
PRPF40A-206ENST00000471167 HIVEP3Q5T1R4 2406 aa0.89□□□□□ -2.27
PRPF40A-206ENST00000471167 DMBT1Q9UGM3 2413 aaPredicted RBP0.89□□□□□ -2.27
PRPF40A-206ENST00000471167 PRKDCP78527 4128 aaKnown RBP0.88□□□□□ -2.27
PRPF40A-206ENST00000471167 LYSTQ99698 3801 aa0.88□□□□□ -2.27
PRPF40A-206ENST00000471167 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
PRPF40A-206ENST00000471167 MAP1BP46821 2468 aaKnown RBP0.88□□□□□ -2.27
PRPF40A-206ENST00000471167 TMEM167AQ8TBQ9 72 aa0.87□□□□□ -2.27
PRPF40A-206ENST00000471167 PTPN13Q12923 2485 aa0.87□□□□□ -2.27
PRPF40A-206ENST00000471167 ACANP16112 2415 aa0.86□□□□□ -2.27
PRPF40A-206ENST00000471167 ACACAQ13085 2346 aa0.84□□□□□ -2.27
PRPF40A-206ENST00000471167 ZFYVE26Q68DK2 2539 aa0.84□□□□□ -2.28
PRPF40A-206ENST00000471167 UNC79Q9P2D8 2635 aa0.84□□□□□ -2.28
PRPF40A-206ENST00000471167 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
PRPF40A-206ENST00000471167 APC2O95996 2303 aa0.83□□□□□ -2.28
PRPF40A-206ENST00000471167 PKD1L1Q8TDX9 2849 aa0.83□□□□□ -2.28
PRPF40A-206ENST00000471167 SETD2Q9BYW2 2564 aaPredicted RBP0.82□□□□□ -2.28
PRPF40A-206ENST00000471167 CCDC168Q8NDH2 2452 aa0.82□□□□□ -2.28
PRPF40A-206ENST00000471167 SPRR2DP22532 72 aa0.81□□□□□ -2.28
PRPF40A-206ENST00000471167 KMT2AQ03164 3969 aa0.81□□□□□ -2.28
PRPF40A-206ENST00000471167 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
PRPF40A-206ENST00000471167 PDZD2O15018 2839 aa0.8□□□□□ -2.28
PRPF40A-206ENST00000471167 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
PRPF40A-206ENST00000471167 RPL39P5Q59GN2 51 aa0.79□□□□□ -2.28
PRPF40A-206ENST00000471167 GCN1Q92616 2671 aaKnown RBP0.79□□□□□ -2.28
PRPF40A-206ENST00000471167 MTORP42345 2549 aa0.78□□□□□ -2.28
PRPF40A-206ENST00000471167 STAB1Q9NY15 2570 aa0.78□□□□□ -2.28
PRPF40A-206ENST00000471167 NF1P21359 2839 aa0.78□□□□□ -2.29
PRPF40A-206ENST00000471167 DNAH11Q96DT5 4516 aa0.77□□□□□ -2.29
PRPF40A-206ENST00000471167 SACSQ9NZJ4 4579 aa0.77□□□□□ -2.29
PRPF40A-206ENST00000471167 HUWE1Q7Z6Z7 4374 aaKnown RBP0.77□□□□□ -2.29
PRPF40A-206ENST00000471167 TENM2Q9NT68 2774 aa0.77□□□□□ -2.29
PRPF40A-206ENST00000471167 SETXQ7Z333 2677 aaKnown RBP0.76□□□□□ -2.29
PRPF40A-206ENST00000471167 SPRR2BP35325 72 aa0.76□□□□□ -2.29
PRPF40A-206ENST00000471167 SPTBN4Q9H254 2564 aa0.76□□□□□ -2.29
PRPF40A-206ENST00000471167 FLNCQ14315 2725 aa0.75□□□□□ -2.29
PRPF40A-206ENST00000471167 RIF1Q5UIP0 2472 aaKnown RBP0.75□□□□□ -2.29
PRPF40A-206ENST00000471167 VPS13DQ5THJ4 4388 aa0.75□□□□□ -2.29
PRPF40A-206ENST00000471167 DEFB108AA8MXU0 73 aa0.74□□□□□ -2.29
PRPF40A-206ENST00000471167 KRTAP8-1Q8IUC2 63 aa0.74□□□□□ -2.29
PRPF40A-206ENST00000471167 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
PRPF40A-206ENST00000471167 MYCBP2O75592 4640 aa0.73□□□□□ -2.29
PRPF40A-206ENST00000471167 FAM186AA6NE01 2351 aa0.72□□□□□ -2.29
PRPF40A-206ENST00000471167 USP24Q9UPU5 2620 aa0.72□□□□□ -2.29
PRPF40A-206ENST00000471167 CUBNO60494 3623 aa0.72□□□□□ -2.29
PRPF40A-206ENST00000471167 ZZEF1O43149 2961 aa0.72□□□□□ -2.29
PRPF40A-206ENST00000471167 SONP18583 2426 aaKnown RBP0.72□□□□□ -2.29
PRPF40A-206ENST00000471167 LRRK2Q5S007 2527 aa0.71□□□□□ -2.3
PRPF40A-206ENST00000471167 RHPN1-AS1Q9BWJ2 59 aa0.71□□□□□ -2.3
PRPF40A-206ENST00000471167 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
PRPF40A-206ENST00000471167 NSD1Q96L73 2696 aaPredicted RBP0.71□□□□□ -2.3
PRPF40A-206ENST00000471167 DMXL1Q9Y485 3027 aa0.7□□□□□ -2.3
PRPF40A-206ENST00000471167 EPG5Q9HCE0 2579 aa0.7□□□□□ -2.3
PRPF40A-206ENST00000471167 ANKHD1Q8IWZ3 2542 aaKnown RBP0.7□□□□□ -2.3
PRPF40A-206ENST00000471167 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
PRPF40A-206ENST00000471167 NCOR2Q9Y618 2525 aa0.69□□□□□ -2.3
PRPF40A-206ENST00000471167 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
PRPF40A-206ENST00000471167 DNAH3Q8TD57 4116 aa0.69□□□□□ -2.3
PRPF40A-206ENST00000471167 ACACBO00763 2458 aa0.69□□□□□ -2.3
PRPF40A-206ENST00000471167 FLNBO75369 2602 aaKnown RBP0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 COL12A1Q99715 3063 aa0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 CRYBG3Q68DQ2 2970 aa0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 A0A096LNI7 61 aa0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 H3BUX3 64 aa0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 DCHS2Q6V1P9 2916 aa0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 TACC2O95359 2948 aa0.68□□□□□ -2.3
PRPF40A-206ENST00000471167 SPENQ96T58 3664 aaKnown RBP0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 MT1AP04731 61 aa0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 SPRR2AP35326 72 aa0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 PKD1P98161 4303 aa0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 COL7A1Q02388 2944 aa0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 HRNRQ86YZ3 2850 aaPredicted RBP0.67□□□□□ -2.3
PRPF40A-206ENST00000471167 FRYQ5TBA9 3013 aa0.66□□□□□ -2.3
PRPF40A-206ENST00000471167 ANK3Q12955 4377 aaKnown RBP0.66□□□□□ -2.3
PRPF40A-206ENST00000471167 LPAP08519 4548 aa0.66□□□□□ -2.3
PRPF40A-206ENST00000471167 SPG11Q96JI7 2443 aa0.66□□□□□ -2.3
PRPF40A-206ENST00000471167 RANBP2P49792 3224 aaKnown RBP0.65□□□□□ -2.31
PRPF40A-206ENST00000471167 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.31
PRPF40A-206ENST00000471167 HSPG2P98160 4391 aa0.65□□□□□ -2.31
PRPF40A-206ENST00000471167 NBPF19A0A087WUL8 3843 aa0.64□□□□□ -2.31
PRPF40A-206ENST00000471167 HECTD4Q9Y4D8 3996 aa0.64□□□□□ -2.31
PRPF40A-206ENST00000471167 CACNA1AO00555 2505 aa0.64□□□□□ -2.31
PRPF40A-206ENST00000471167 PKHD1L1Q86WI1 4243 aa0.64□□□□□ -2.31
PRPF40A-206ENST00000471167 DNAH2Q9P225 4427 aa0.64□□□□□ -2.31
PRPF40A-206ENST00000471167 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
PRPF40A-206ENST00000471167 ZFHX4Q86UP3 3567 aa0.63□□□□□ -2.31
PRPF40A-206ENST00000471167 UTP20O75691 2785 aaKnown RBP0.63□□□□□ -2.31
PRPF40A-206ENST00000471167 SMR3BP02814 79 aaPredicted RBP0.63□□□□□ -2.31
PRPF40A-206ENST00000471167 NBEAL2Q6ZNJ1 2754 aa0.63□□□□□ -2.31
PRPF40A-206ENST00000471167 ANKRD11Q6UB99 2663 aaPredicted RBP0.63□□□□□ -2.31
PRPF40A-206ENST00000471167 CELSR3Q9NYQ7 3312 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms