RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 PANO1I0J062 215 aa6.18□□□□□ -1.42
RRP1B-202ENST00000470886 APCP25054 2843 aa6.18□□□□□ -1.42
RRP1B-202ENST00000470886 RELNP78509 3460 aa6.17□□□□□ -1.42
RRP1B-202ENST00000470886 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
RRP1B-202ENST00000470886 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
RRP1B-202ENST00000470886 MAP1AP78559 2803 aaPredicted RBP6.16□□□□□ -1.42
RRP1B-202ENST00000470886 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
RRP1B-202ENST00000470886 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.43
RRP1B-202ENST00000470886 COL12A1Q99715 3063 aa6.13□□□□□ -1.43
RRP1B-202ENST00000470886 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
RRP1B-202ENST00000470886 DCHS2Q6V1P9 2916 aa6.12□□□□□ -1.43
RRP1B-202ENST00000470886 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
RRP1B-202ENST00000470886 A0A087X002 238 aa6.11□□□□□ -1.43
RRP1B-202ENST00000470886 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
RRP1B-202ENST00000470886 LAMA5O15230 3695 aa6.09□□□□□ -1.43
RRP1B-202ENST00000470886 NBEAL1Q6ZS30 2694 aa6.08□□□□□ -1.44
RRP1B-202ENST00000470886 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
RRP1B-202ENST00000470886 NOTCH1P46531 2555 aa6.08□□□□□ -1.44
RRP1B-202ENST00000470886 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
RRP1B-202ENST00000470886 FBN2P35556 2912 aa6.07□□□□□ -1.44
RRP1B-202ENST00000470886 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
RRP1B-202ENST00000470886 ZANQ9Y493 2812 aa6.06□□□□□ -1.44
RRP1B-202ENST00000470886 COL6A5A8TX70 2615 aa6.06□□□□□ -1.44
RRP1B-202ENST00000470886 S4R3F8 94 aa6.06□□□□□ -1.44
RRP1B-202ENST00000470886 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
RRP1B-202ENST00000470886 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
RRP1B-202ENST00000470886 NSD1Q96L73 2696 aaPredicted RBP6.04□□□□□ -1.44
RRP1B-202ENST00000470886 Q6ZSA8 131 aa6.03□□□□□ -1.44
RRP1B-202ENST00000470886 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
RRP1B-202ENST00000470886 ITPR2Q14571 2701 aa6.03□□□□□ -1.44
RRP1B-202ENST00000470886 MXRA5Q9NR99 2828 aa6.03□□□□□ -1.44
RRP1B-202ENST00000470886 J3QL48 77 aa6.01□□□□□ -1.45
RRP1B-202ENST00000470886 ZFHX3Q15911 3703 aa5.99□□□□□ -1.45
RRP1B-202ENST00000470886 PDZD2O15018 2839 aa5.98□□□□□ -1.45
RRP1B-202ENST00000470886 ANK3Q12955 4377 aaKnown RBP5.97□□□□□ -1.45
RRP1B-202ENST00000470886 KRTAP13-2Q52LG2 175 aa5.96□□□□□ -1.46
RRP1B-202ENST00000470886 NIPBLQ6KC79 2804 aaeCLIP5.95□□□□□ -1.462e-7■□□□□ 9.3
RRP1B-202ENST00000470886 A8MUU9 505 aa5.93□□□□□ -1.46
RRP1B-202ENST00000470886 CELSR2Q9HCU4 2923 aa5.91□□□□□ -1.46
RRP1B-202ENST00000470886 HIVEP1P15822 2718 aa5.9□□□□□ -1.46
RRP1B-202ENST00000470886 CELSR1Q9NYQ6 3014 aa5.89□□□□□ -1.47
RRP1B-202ENST00000470886 STAB2Q8WWQ8 2551 aa5.89□□□□□ -1.47
RRP1B-202ENST00000470886 ASH1LQ9NR48 2969 aaKnown RBP5.88□□□□□ -1.47
RRP1B-202ENST00000470886 CRYBG3Q68DQ2 2970 aa5.86□□□□□ -1.47
RRP1B-202ENST00000470886 CUBNO60494 3623 aa5.86□□□□□ -1.47
RRP1B-202ENST00000470886 R4GN34 69 aa5.85□□□□□ -1.47
RRP1B-202ENST00000470886 Q5VSD8 79 aa5.84□□□□□ -1.48
RRP1B-202ENST00000470886 NF1P21359 2839 aa5.82□□□□□ -1.48
RRP1B-202ENST00000470886 KRTAP21-3Q3LHN1 58 aa5.81□□□□□ -1.48
RRP1B-202ENST00000470886 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
RRP1B-202ENST00000470886 M0QZ58 72 aa5.78□□□□□ -1.48
RRP1B-202ENST00000470886 CSMD2Q7Z408 3487 aa5.77□□□□□ -1.49
RRP1B-202ENST00000470886 TENM4Q6N022 2769 aa5.77□□□□□ -1.49
RRP1B-202ENST00000470886 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
RRP1B-202ENST00000470886 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
RRP1B-202ENST00000470886 VPS13CQ709C8 3753 aa5.73□□□□□ -1.49
RRP1B-202ENST00000470886 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
RRP1B-202ENST00000470886 OTOGQ6ZRI0 2925 aa5.67□□□□□ -1.5
RRP1B-202ENST00000470886 TENM3Q9P273 2699 aa5.65□□□□□ -1.51
RRP1B-202ENST00000470886 H0YAA0 97 aa5.62□□□□□ -1.51
RRP1B-202ENST00000470886 TENM1Q9UKZ4 2725 aa5.62□□□□□ -1.51
RRP1B-202ENST00000470886 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
RRP1B-202ENST00000470886 VWFP04275 2813 aa5.58□□□□□ -1.52
RRP1B-202ENST00000470886 M0R2T5 61 aa5.55□□□□□ -1.52
RRP1B-202ENST00000470886 P0C880 135 aa5.55□□□□□ -1.52
RRP1B-202ENST00000470886 NBPF19A0A087WUL8 3843 aa5.54□□□□□ -1.52
RRP1B-202ENST00000470886 HUWE1Q7Z6Z7 4374 aaKnown RBP5.54□□□□□ -1.52
RRP1B-202ENST00000470886 XP32Q5T750 250 aa5.52□□□□□ -1.53
RRP1B-202ENST00000470886 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
RRP1B-202ENST00000470886 ZNF469Q96JG9 3925 aaPredicted RBP5.47□□□□□ -1.53
RRP1B-202ENST00000470886 A0A1B0GVY2 172 aa5.43□□□□□ -1.54
RRP1B-202ENST00000470886 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
RRP1B-202ENST00000470886 TNP1P09430 55 aa5.4□□□□□ -1.54
RRP1B-202ENST00000470886 TRRAPQ9Y4A5 3859 aa5.4□□□□□ -1.55
RRP1B-202ENST00000470886 TGP01266 2768 aa5.4□□□□□ -1.55
RRP1B-202ENST00000470886 FBN1P35555 2871 aaKnown RBP5.39□□□□□ -1.55
RRP1B-202ENST00000470886 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
RRP1B-202ENST00000470886 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
RRP1B-202ENST00000470886 DNAH9Q9NYC9 4486 aa5.34□□□□□ -1.55
RRP1B-202ENST00000470886 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
RRP1B-202ENST00000470886 PKD1L1Q8TDX9 2849 aa5.31□□□□□ -1.56
RRP1B-202ENST00000470886 DNAH1Q9P2D7 4330 aa5.3□□□□□ -1.56
RRP1B-202ENST00000470886 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
RRP1B-202ENST00000470886 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
RRP1B-202ENST00000470886 VPS13DQ5THJ4 4388 aa5.25□□□□□ -1.57
RRP1B-202ENST00000470886 DNAH17Q9UFH2 4485 aa5.24□□□□□ -1.57
RRP1B-202ENST00000470886 DNAH10Q8IVF4 4471 aa5.23□□□□□ -1.57
RRP1B-202ENST00000470886 CMYA5Q8N3K9 4069 aa5.2□□□□□ -1.58
RRP1B-202ENST00000470886 KRTAP12-2P59991 146 aa5.19□□□□□ -1.58
RRP1B-202ENST00000470886 TENM2Q9NT68 2774 aa5.19□□□□□ -1.58
RRP1B-202ENST00000470886 KRTAP10-4P60372 401 aaPredicted RBP5.19□□□□□ -1.58
RRP1B-202ENST00000470886 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
RRP1B-202ENST00000470886 ANK2Q01484 3957 aa5.17□□□□□ -1.58
RRP1B-202ENST00000470886 PLECQ15149 4684 aaKnown RBP5.16□□□□□ -1.58
RRP1B-202ENST00000470886 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
RRP1B-202ENST00000470886 CSMD3Q7Z407 3707 aa5.16□□□□□ -1.58
RRP1B-202ENST00000470886 DNAH6Q9C0G6 4158 aa5.16□□□□□ -1.58
RRP1B-202ENST00000470886 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
RRP1B-202ENST00000470886 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
RRP1B-202ENST00000470886 DNAH8Q96JB1 4490 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms