RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 IGIPA6NJ69 53 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 SPRR2AP35326 72 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 WT1-ASQ06250 92 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 KRTAP20-1Q3LI63 56 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 MINOS1Q5TGZ0 78 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 DEFB106AQ8N104 65 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 DNAH3Q8TD57 4116 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 CEP290O15078 2479 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 CDC42BPAQ5VT25 1732 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 MAST1Q9Y2H9 1570 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 H0YGG7 62 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
SSB-209ENST00000470621 CPS1P31327 1500 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 PKD1L2Q7Z442 2459 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 PREX2Q70Z35 1606 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
SSB-209ENST00000470621 ZZEF1O43149 2961 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 SETD2Q9BYW2 2564 aaPredicted RBP-0.1□□□□□ -2.43
SSB-209ENST00000470621 NF1P21359 2839 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 SPRR2EP22531 72 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 C6orf48Q9UBA6 75 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 AGLP35573 1532 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 DNAH2Q9P225 4427 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.43
SSB-209ENST00000470621 RYR2Q92736 4967 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 HERC1Q15751 4861 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 EEA1Q15075 1411 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 DMXL1Q9Y485 3027 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 FCER1GP30273 86 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 AKAP9Q99996 3911 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 VPS13DQ5THJ4 4388 aa-0.11□□□□□ -2.43
SSB-209ENST00000470621 DNAH6Q9C0G6 4158 aa-0.12□□□□□ -2.43
SSB-209ENST00000470621 FAT1Q14517 4588 aa-0.12□□□□□ -2.43
SSB-209ENST00000470621 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
SSB-209ENST00000470621 RNF213Q63HN8 5207 aa-0.12□□□□□ -2.43
SSB-209ENST00000470621 GCN1Q92616 2671 aaKnown RBP-0.13□□□□□ -2.43
SSB-209ENST00000470621 H3BNG1 76 aa-0.13□□□□□ -2.43
SSB-209ENST00000470621 USH2AO75445 5202 aa-0.13□□□□□ -2.43
SSB-209ENST00000470621 HERC2O95714 4834 aa-0.13□□□□□ -2.43
SSB-209ENST00000470621 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.14□□□□□ -2.43
SSB-209ENST00000470621 NBPF19A0A087WUL8 3843 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 RYR1P21817 5038 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 KIAA1109Q2LD37 5005 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 MT1AP04731 61 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 SMIM5Q71RC9 77 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 SPG11Q96JI7 2443 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 SYCP2Q9BX26 1530 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 SRRM2Q9UQ35 2752 aaKnown RBP-0.14□□□□□ -2.43
SSB-209ENST00000470621 TACC2O95359 2948 aa-0.14□□□□□ -2.43
SSB-209ENST00000470621 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
SSB-209ENST00000470621 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
SSB-209ENST00000470621 KRTAP19-7Q3SYF9 63 aa-0.15□□□□□ -2.43
SSB-209ENST00000470621 LINC00308Q8TCZ7 52 aa-0.15□□□□□ -2.43
SSB-209ENST00000470621 SPRR2FQ96RM1 72 aa-0.15□□□□□ -2.43
SSB-209ENST00000470621 FASNP49327 2511 aaKnown RBP-0.15□□□□□ -2.43
SSB-209ENST00000470621 UBR4Q5T4S7 5183 aa-0.16□□□□□ -2.43
SSB-209ENST00000470621 TGP01266 2768 aa-0.16□□□□□ -2.43
SSB-209ENST00000470621 NRXN3Q9Y4C0 1643 aa-0.16□□□□□ -2.43
SSB-209ENST00000470621 ABCA13Q86UQ4 5058 aa-0.16□□□□□ -2.43
SSB-209ENST00000470621 EFCAB6Q5THR3 1501 aa-0.16□□□□□ -2.43
SSB-209ENST00000470621 IGLV5-48A0A075B6I7 105 aa-0.16□□□□□ -2.44
SSB-209ENST00000470621 C9orf92A6NGG3 77 aa-0.16□□□□□ -2.44
SSB-209ENST00000470621 NMES1Q9C002 83 aa-0.16□□□□□ -2.44
SSB-209ENST00000470621 DNHD1Q96M86 4753 aa-0.16□□□□□ -2.44
SSB-209ENST00000470621 EPPK1P58107 5090 aaKnown RBP-0.16□□□□□ -2.44
SSB-209ENST00000470621 STAB2Q8WWQ8 2551 aa-0.16□□□□□ -2.44
SSB-209ENST00000470621 DNAH1Q9P2D7 4330 aa-0.17□□□□□ -2.44
SSB-209ENST00000470621 RANBP2P49792 3224 aaKnown RBP-0.17□□□□□ -2.44
SSB-209ENST00000470621 KRTAP20-2Q3LI61 65 aa-0.17□□□□□ -2.44
SSB-209ENST00000470621 NBEAL1Q6ZS30 2694 aa-0.17□□□□□ -2.44
SSB-209ENST00000470621 LMO7Q8WWI1 1683 aa-0.18□□□□□ -2.44
SSB-209ENST00000470621 MTORP42345 2549 aa-0.18□□□□□ -2.44
SSB-209ENST00000470621 SPENQ96T58 3664 aaKnown RBP-0.18□□□□□ -2.44
SSB-209ENST00000470621 HTTP42858 3142 aa-0.18□□□□□ -2.44
SSB-209ENST00000470621 FANCD2Q9BXW9 1451 aa-0.18□□□□□ -2.44
SSB-209ENST00000470621 DNAH8Q96JB1 4490 aa-0.18□□□□□ -2.44
SSB-209ENST00000470621 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.18□□□□□ -2.44
SSB-209ENST00000470621 EPG5Q9HCE0 2579 aa-0.18□□□□□ -2.44
SSB-209ENST00000470621 A0A1B0GUL6 1792 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 KIF21BO75037 1637 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 KALRNO60229 2985 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 HYDINQ4G0P3 5121 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 TEP1Q99973 2627 aaKnown RBP-0.19□□□□□ -2.44
SSB-209ENST00000470621 SERF2P84101 59 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 IQGAP1P46940 1657 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 NBEAL2Q6ZNJ1 2754 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 MYO18BQ8IUG5 2567 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 BIRC6Q9NR09 4857 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
SSB-209ENST00000470621 ADCY10Q96PN6 1610 aa-0.2□□□□□ -2.44
SSB-209ENST00000470621 LRRK2Q5S007 2527 aa-0.2□□□□□ -2.44
SSB-209ENST00000470621 FAM186AA6NE01 2351 aa-0.2□□□□□ -2.44
SSB-209ENST00000470621 MT4P47944 62 aa-0.2□□□□□ -2.44
SSB-209ENST00000470621 TMEM167BQ9NRX6 74 aa-0.2□□□□□ -2.44
SSB-209ENST00000470621 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.2□□□□□ -2.44
SSB-209ENST00000470621 ANKRD11Q6UB99 2663 aaPredicted RBP-0.2□□□□□ -2.44
SSB-209ENST00000470621 SPTBN5Q9NRC6 3674 aaKnown RBP-0.2□□□□□ -2.44
SSB-209ENST00000470621 DNAH7Q8WXX0 4024 aa-0.21□□□□□ -2.44
SSB-209ENST00000470621 ACACBO00763 2458 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms