RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
SREBF1-209ENST00000470247 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
SREBF1-209ENST00000470247 A8MWP4 228 aa6.18□□□□□ -1.42
SREBF1-209ENST00000470247 BPY2O14599 106 aa6.18□□□□□ -1.42
SREBF1-209ENST00000470247 LPAP08519 4548 aa6.18□□□□□ -1.42
SREBF1-209ENST00000470247 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
SREBF1-209ENST00000470247 K7ERU9 68 aa6.16□□□□□ -1.42
SREBF1-209ENST00000470247 PRR15Q8IV56 129 aa6.16□□□□□ -1.42
SREBF1-209ENST00000470247 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
SREBF1-209ENST00000470247 K7EQZ3 153 aa6.15□□□□□ -1.42
SREBF1-209ENST00000470247 LINC00643Q86TS7 51 aa6.15□□□□□ -1.42
SREBF1-209ENST00000470247 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
SREBF1-209ENST00000470247 CXCL6P80162 114 aa6.14□□□□□ -1.43
SREBF1-209ENST00000470247 Q8N9L7 120 aa6.14□□□□□ -1.43
SREBF1-209ENST00000470247 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
SREBF1-209ENST00000470247 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
SREBF1-209ENST00000470247 NDUFB1O75438 58 aa6.13□□□□□ -1.43
SREBF1-209ENST00000470247 LINC00313P59037 77 aa6.12□□□□□ -1.43
SREBF1-209ENST00000470247 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
SREBF1-209ENST00000470247 XP32Q5T750 250 aa6.11□□□□□ -1.43
SREBF1-209ENST00000470247 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
SREBF1-209ENST00000470247 MMP24-AS1A0A0U1RRL7 71 aa6.1□□□□□ -1.43
SREBF1-209ENST00000470247 ATP5EP2Q5VTU8 51 aa6.1□□□□□ -1.43
SREBF1-209ENST00000470247 LRP2P98164 4655 aa6.1□□□□□ -1.43
SREBF1-209ENST00000470247 A8MUU9 505 aa6.06□□□□□ -1.44
SREBF1-209ENST00000470247 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
SREBF1-209ENST00000470247 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
SREBF1-209ENST00000470247 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
SREBF1-209ENST00000470247 Q75L30 129 aa6.04□□□□□ -1.44
SREBF1-209ENST00000470247 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
SREBF1-209ENST00000470247 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
SREBF1-209ENST00000470247 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
SREBF1-209ENST00000470247 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
SREBF1-209ENST00000470247 WFDC13Q8IUB5 93 aa6.03□□□□□ -1.44
SREBF1-209ENST00000470247 HIST1H4AP62805 103 aaKnown RBP6.02□□□□□ -1.45
SREBF1-209ENST00000470247 MRPL34Q9BQ48 92 aaKnown RBP6.02□□□□□ -1.45
SREBF1-209ENST00000470247 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
SREBF1-209ENST00000470247 A0A087WVE0 104 aa6.01□□□□□ -1.45
SREBF1-209ENST00000470247 CASC2Q6XLA1 102 aa6.01□□□□□ -1.45
SREBF1-209ENST00000470247 MUC17Q685J3 4493 aa6□□□□□ -1.45
SREBF1-209ENST00000470247 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
SREBF1-209ENST00000470247 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
SREBF1-209ENST00000470247 PCOTHQ58A44 107 aa5.97□□□□□ -1.45
SREBF1-209ENST00000470247 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
SREBF1-209ENST00000470247 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
SREBF1-209ENST00000470247 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
SREBF1-209ENST00000470247 Q5W150 140 aa5.93□□□□□ -1.46
SREBF1-209ENST00000470247 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
SREBF1-209ENST00000470247 ZCCHC13Q8WW36 166 aaKnown RBP5.92□□□□□ -1.46
SREBF1-209ENST00000470247 NDUFS5O43920 106 aa5.91□□□□□ -1.46
SREBF1-209ENST00000470247 OCR1Q9BZK8 76 aa5.88□□□□□ -1.47
SREBF1-209ENST00000470247 TP53AIP1Q9HCN2 124 aa5.87□□□□□ -1.47
SREBF1-209ENST00000470247 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
SREBF1-209ENST00000470247 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
SREBF1-209ENST00000470247 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
SREBF1-209ENST00000470247 UQCRQO14949 82 aa5.83□□□□□ -1.48
SREBF1-209ENST00000470247 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
SREBF1-209ENST00000470247 SPINK7P58062 85 aa5.81□□□□□ -1.48
SREBF1-209ENST00000470247 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
SREBF1-209ENST00000470247 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
SREBF1-209ENST00000470247 HRES1P13985 223 aa5.78□□□□□ -1.48
SREBF1-209ENST00000470247 MUC2Q02817 5179 aa5.77□□□□□ -1.49
SREBF1-209ENST00000470247 H0Y9P7 68 aa5.77□□□□□ -1.49
SREBF1-209ENST00000470247 ATOX1O00244 68 aa5.77□□□□□ -1.49
SREBF1-209ENST00000470247 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
SREBF1-209ENST00000470247 IGKV2D-30A0A075B6S6 120 aa5.76□□□□□ -1.49
SREBF1-209ENST00000470247 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
SREBF1-209ENST00000470247 C5orf47Q569G3 176 aa5.76□□□□□ -1.49
SREBF1-209ENST00000470247 SMIM20Q8N5G0 67 aa5.75□□□□□ -1.49
SREBF1-209ENST00000470247 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
SREBF1-209ENST00000470247 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
SREBF1-209ENST00000470247 CYP4F30PQ9H0H9 118 aa5.74□□□□□ -1.49
SREBF1-209ENST00000470247 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
SREBF1-209ENST00000470247 LINC00208Q96KT6 92 aa5.72□□□□□ -1.49
SREBF1-209ENST00000470247 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
SREBF1-209ENST00000470247 SERP2Q8N6R1 65 aa5.71□□□□□ -1.5
SREBF1-209ENST00000470247 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
SREBF1-209ENST00000470247 MP68P56378 58 aa5.7□□□□□ -1.5
SREBF1-209ENST00000470247 H3BPC8 53 aa5.69□□□□□ -1.5
SREBF1-209ENST00000470247 A0A0U1RQV1 116 aa5.67□□□□□ -1.5
SREBF1-209ENST00000470247 KLKP1Q107X0 134 aa5.66□□□□□ -1.5
SREBF1-209ENST00000470247 COX7CP15954 63 aa5.65□□□□□ -1.5
SREBF1-209ENST00000470247 C4orf26Q17RF5 130 aa5.65□□□□□ -1.5
SREBF1-209ENST00000470247 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
SREBF1-209ENST00000470247 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
SREBF1-209ENST00000470247 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
SREBF1-209ENST00000470247 C20orf197Q8N268 126 aa5.62□□□□□ -1.51
SREBF1-209ENST00000470247 ANAPC13Q9BS18 74 aa5.62□□□□□ -1.51
SREBF1-209ENST00000470247 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
SREBF1-209ENST00000470247 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
SREBF1-209ENST00000470247 FAM236DA0A1B0GTK5 79 aa5.58□□□□□ -1.52
SREBF1-209ENST00000470247 FAM236CP0DP71 79 aa5.58□□□□□ -1.52
SREBF1-209ENST00000470247 MT1HP80294 61 aa5.58□□□□□ -1.52
SREBF1-209ENST00000470247 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
SREBF1-209ENST00000470247 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
SREBF1-209ENST00000470247 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
SREBF1-209ENST00000470247 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
SREBF1-209ENST00000470247 H7BZZ5 65 aa5.5□□□□□ -1.53
SREBF1-209ENST00000470247 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
SREBF1-209ENST00000470247 A8MUN3 132 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms