RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 C1orf195Q5TG92 126 aa10.39□□□□□ -0.75
SMC4-211ENST00000469858 CASC2Q6XLA1 102 aa10.39□□□□□ -0.75
SMC4-211ENST00000469858 MMP24-AS1A0A0U1RRL7 71 aa10.38□□□□□ -0.75
SMC4-211ENST00000469858 SPAG11AQ6PDA7 123 aa10.37□□□□□ -0.75
SMC4-211ENST00000469858 KRTAP29-1A8MX34 341 aaPredicted RBP10.37□□□□□ -0.75
SMC4-211ENST00000469858 OCR1Q9BZK8 76 aa10.37□□□□□ -0.75
SMC4-211ENST00000469858 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
SMC4-211ENST00000469858 Q8N1X5 172 aa10.35□□□□□ -0.75
SMC4-211ENST00000469858 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
SMC4-211ENST00000469858 RPS29P62273 56 aaKnown RBP10.33□□□□□ -0.76
SMC4-211ENST00000469858 NOTCH2NLQ7Z3S9 236 aa10.32□□□□□ -0.76
SMC4-211ENST00000469858 C20orf197Q8N268 126 aa10.28□□□□□ -0.76
SMC4-211ENST00000469858 LRP1Q07954 4544 aaKnown RBP10.25□□□□□ -0.77
SMC4-211ENST00000469858 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
SMC4-211ENST00000469858 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
SMC4-211ENST00000469858 TMEM254Q8TBM7 123 aa10.23□□□□□ -0.77
SMC4-211ENST00000469858 MRPL34Q9BQ48 92 aaKnown RBP10.23□□□□□ -0.77
SMC4-211ENST00000469858 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
SMC4-211ENST00000469858 LINC00313P59037 77 aa10.22□□□□□ -0.77
SMC4-211ENST00000469858 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
SMC4-211ENST00000469858 SNURFQ9Y675 71 aa10.21□□□□□ -0.77
SMC4-211ENST00000469858 NDUFS5O43920 106 aa10.2□□□□□ -0.78
SMC4-211ENST00000469858 TNXBP22105 4242 aa10.2□□□□□ -0.78
SMC4-211ENST00000469858 FAT3Q8TDW7 4589 aa10.17□□□□□ -0.78
SMC4-211ENST00000469858 KLKP1Q107X0 134 aa10.17□□□□□ -0.78
SMC4-211ENST00000469858 RETNLBQ9BQ08 111 aa10.17□□□□□ -0.78
SMC4-211ENST00000469858 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
SMC4-211ENST00000469858 A0A0U1RQV1 116 aa10.14□□□□□ -0.79
SMC4-211ENST00000469858 TP53AIP1Q9HCN2 124 aa10.14□□□□□ -0.79
SMC4-211ENST00000469858 KRTAP4-5Q9BYR2 181 aa10.13□□□□□ -0.79
SMC4-211ENST00000469858 H0Y9P7 68 aa10.12□□□□□ -0.79
SMC4-211ENST00000469858 MP68P56378 58 aa10.11□□□□□ -0.79
SMC4-211ENST00000469858 KRTAP16-1A8MUX0 517 aa10.1□□□□□ -0.79
SMC4-211ENST00000469858 MYCBP2O75592 4640 aa10.1□□□□□ -0.79
SMC4-211ENST00000469858 TRAV22A0A0B4J277 110 aa10.1□□□□□ -0.79
SMC4-211ENST00000469858 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
SMC4-211ENST00000469858 H7BZZ5 65 aa10.06□□□□□ -0.8
SMC4-211ENST00000469858 Q8N9P0 234 aaPredicted RBP10.06□□□□□ -0.8
SMC4-211ENST00000469858 LINC00208Q96KT6 92 aa10.06□□□□□ -0.8
SMC4-211ENST00000469858 ZCCHC13Q8WW36 166 aaKnown RBP10.05□□□□□ -0.8
SMC4-211ENST00000469858 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
SMC4-211ENST00000469858 C9orf92A6NGG3 77 aa10.03□□□□□ -0.8
SMC4-211ENST00000469858 NDUFC1O43677 76 aa10.03□□□□□ -0.8
SMC4-211ENST00000469858 OXTP01178 125 aa10.02□□□□□ -0.81
SMC4-211ENST00000469858 H3BPC8 53 aa10.01□□□□□ -0.81
SMC4-211ENST00000469858 TMEM258P61165 79 aa10.01□□□□□ -0.81
SMC4-211ENST00000469858 BIRC6Q9NR09 4857 aa10.01□□□□□ -0.81
SMC4-211ENST00000469858 Q5W150 140 aa10.01□□□□□ -0.81
SMC4-211ENST00000469858 C1orf64Q8NEQ6 169 aa10.01□□□□□ -0.81
SMC4-211ENST00000469858 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
SMC4-211ENST00000469858 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
SMC4-211ENST00000469858 FAM236DA0A1B0GTK5 79 aa9.92□□□□□ -0.82
SMC4-211ENST00000469858 FAM236CP0DP71 79 aa9.92□□□□□ -0.82
SMC4-211ENST00000469858 ABCA13Q86UQ4 5058 aa9.9□□□□□ -0.83
SMC4-211ENST00000469858 HERC2O95714 4834 aa9.89□□□□□ -0.83
SMC4-211ENST00000469858 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
SMC4-211ENST00000469858 C20orf166-AS1Q96NR2 134 aa9.88□□□□□ -0.83
SMC4-211ENST00000469858 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
SMC4-211ENST00000469858 A8MUU9 505 aa9.86□□□□□ -0.83
SMC4-211ENST00000469858 PCOTHQ58A44 107 aa9.86□□□□□ -0.83
SMC4-211ENST00000469858 PRR4Q16378 134 aa9.84□□□□□ -0.83
SMC4-211ENST00000469858 ATP5EP56381 51 aaPredicted RBP9.82□□□□□ -0.84
SMC4-211ENST00000469858 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
SMC4-211ENST00000469858 J3QL48 77 aa9.8□□□□□ -0.84
SMC4-211ENST00000469858 IGKV2-30P06310 120 aa9.8□□□□□ -0.84
SMC4-211ENST00000469858 Q75L30 129 aa9.78□□□□□ -0.84
SMC4-211ENST00000469858 IGKV2D-30A0A075B6S6 120 aa9.77□□□□□ -0.84
SMC4-211ENST00000469858 SPANXA2-OT1Q8N9U9 137 aa9.76□□□□□ -0.85
SMC4-211ENST00000469858 XP32Q5T750 250 aa9.74□□□□□ -0.85
SMC4-211ENST00000469858 SERP1Q9Y6X1 66 aa9.7□□□□□ -0.86
SMC4-211ENST00000469858 C7orf65Q6ZTY9 151 aa9.69□□□□□ -0.86
SMC4-211ENST00000469858 RPL37P61927 97 aaKnown RBP9.68□□□□□ -0.86
SMC4-211ENST00000469858 HRES1P13985 223 aa9.68□□□□□ -0.86
SMC4-211ENST00000469858 RPS28P62857 69 aaKnown RBP9.68□□□□□ -0.86
SMC4-211ENST00000469858 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
SMC4-211ENST00000469858 ATP11AUNQ6ZP68 121 aa9.66□□□□□ -0.86
SMC4-211ENST00000469858 SPINK7P58062 85 aa9.59□□□□□ -0.87
SMC4-211ENST00000469858 LPAP08519 4548 aa9.55□□□□□ -0.88
SMC4-211ENST00000469858 PCLOQ9Y6V0 5065 aa9.55□□□□□ -0.88
SMC4-211ENST00000469858 DMAC1Q96GE9 116 aa9.52□□□□□ -0.89
SMC4-211ENST00000469858 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
SMC4-211ENST00000469858 COA5Q86WW8 74 aa9.52□□□□□ -0.89
SMC4-211ENST00000469858 LRP2P98164 4655 aa9.49□□□□□ -0.89
SMC4-211ENST00000469858 ACYP2P14621 99 aa9.48□□□□□ -0.89
SMC4-211ENST00000469858 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
SMC4-211ENST00000469858 A8MUN3 132 aa9.38□□□□□ -0.91
SMC4-211ENST00000469858 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
SMC4-211ENST00000469858 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
SMC4-211ENST00000469858 KRTAP3-1Q9BYR8 98 aa9.35□□□□□ -0.91
SMC4-211ENST00000469858 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
SMC4-211ENST00000469858 COX6B2Q6YFQ2 88 aa9.34□□□□□ -0.91
SMC4-211ENST00000469858 HERC1Q15751 4861 aa9.32□□□□□ -0.92
SMC4-211ENST00000469858 Q1T7F1 81 aa9.24□□□□□ -0.93
SMC4-211ENST00000469858 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
SMC4-211ENST00000469858 V9GYY9 64 aa9.2□□□□□ -0.94
SMC4-211ENST00000469858 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
SMC4-211ENST00000469858 RBM12B-AS1Q9P1G2 102 aa9.17□□□□□ -0.94
SMC4-211ENST00000469858 PSPHP1O15172 72 aa9.15□□□□□ -0.95
SMC4-211ENST00000469858 MUC17Q685J3 4493 aa9.14□□□□□ -0.95
SMC4-211ENST00000469858 LINC01558Q9Y6Z2 57 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms